Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

3,225

datasets available to search

ShareScore release 0.9.0

Reset

Dataset results

3,225 results for “Case of study”

Learn how ShareScore rates datasets ↗
zenodo36/100

Simulated time series and indicators for the Zambezi River Basin case study

<p>The archive includes:</p> <ul> <li>monthly time series over 2020-2059 time horizon of different physical variables, simulated by the Decision Analytic Framework (DAF) Strategic model of the Zambezi River Basin for the 7 interesting pathways identified in the Negotiation Simulation Lab meeting;</li> <li>a set of evaluation indicators, aggregated at different spatial and temporal scales, for the 7 interesting pathways.</li> </ul> <p>More details on physical variables and indicators included are available in the DAFNE Deliverable D7.3.</p> <p>Files are provided in the <em>csv </em>format, one per each physical variable or indicator: the first 13 rows contain metadata, while data starts at row 14 and use as many columns as the pathways considered. Metadata are the following:</p> <ul> <li><em>name</em>, time series or indicaror label</li> <li><em>author, </em>reference person or team for the specific time series</li> <li><em>created,</em> timestamp of the file creation</li> <li><em>description, </em>description of file content</li> <li><em>unit, </em>unit of measurement</li> <li><em>origin, </em>description of the simulation</li> <li><em>time_sampling,</em> whether the variable is sampled at a given point in time (instantaneous) or represents a time interval (interval)</li> <li><em>frequency, </em>time step of the time series</li> <li><em>scenario, </em>label of scenario</li> <li><em>marker_id, </em>label of the related model component</li> <li><em>id_type, </em>type of time series</li> <li><em>timestart,timeend,P1,P2,P3,P4,P5,P6,P7 : </em>header row of the data, with time information (in the matlab datenum format) at the beginning and pathways on each column</li> </ul>

opencc-by-4.0Dec 2019View details →
zenodo36/100

Simulated time series and indicators for the Omo-Turkana Basin case study

<p>The archive includes:</p> <ul> <li>daily time series over 2021-2099 time horizon of different physical variables, simulated by the Water Energy Food Integrated Model on the Omo Turkana River Basin for the 6 interesting pathways identified in the Negotiation Simulation Lab meeting;</li> <li>a set of evaluation indicators, aggregated at different spatial and temporal scales, for the 6 interesting pathways.</li> </ul> <p>More details on physical variables and indicators included are available in the DAFNE Deliverable D7.3.</p> <p>Files are provided in the <em>csv </em>format, one per each physical variable or indicator: the first 13 rows contain metadata, while data starts at row 14 and use as many columns as the pathways considered. Metadata are the following:</p> <ul> <li><em>name</em>, time series or indicaror label</li> <li><em>author, </em>reference person or team for the specific time series</li> <li><em>created,</em> timestamp of the file creation</li> <li><em>description, </em>description of file content</li> <li><em>unit, </em>unit of measurement</li> <li><em>origin, </em>description of the simulation</li> <li><em>time_sampling,</em> whether the variable is sampled at a given point in time (instantaneous) or represents a time interval (interval)</li> <li><em>frequency, </em>time step of the time series</li> <li><em>scenario, </em>label of scenario</li> <li><em>marker_id, </em>label of the related model component</li> <li><em>id_type, </em>type of time series</li> <li><em>timestart,timeend,P1,P2,P3,P4,P5,P6 : </em>header row of the data, with time information (in the matlab datenum format) at the beginning and pathways on each column</li> </ul>

opencc-by-4.0Dec 2019View details →
zenodo36/100

Processed SpectrumDocuments from AllPositive (case study for MS2Query)

<p>Processed SpectrumDocuments of the &quot;AllPositive&quot; dataset created from&nbsp;GNPS positive ionmode mass spectra. They are used in a case study for MS2Query:&nbsp;https://github.com/iomega/ms2query.</p> <p>Reading this pickle file in python will give a tuple of two lists of spec2vec.SpectrumDocument. The first list contains 2,000 spectra and the second list contains&nbsp;93,320 spectra that are used&nbsp;as query and library spectra in the case study.</p>

opencc-by-4.0Dec 2019View details →
zenodo36/100

Implementation of ATP and Microbial Indicator Testing for Hygiene Monitoring in a Tofu Production Facility Improves Product Quality and Hygienic Conditions of Food Contact Surfaces: A Case Study

<p>This is the code and associated data that was used to generate conclusions for the following manuscript published in Applied and Environmental Microbiology:</p> <p>DOI:&nbsp;10.1128/AEM.02278-20</p> <p>Implementation of ATP and Microbial Indicator Testing for Hygiene Monitoring in a Tofu Production Facility Improves Product Quality and Hygienic Conditions of Food Contact Surfaces: A Case Study</p> <p>Authors: Jonathan H. Sogin(a), Gabriela Lopez Velasco(b), Burcu Yordem(b), Cari K. Lingle(b), John M. David(b), Mario Cobo(a), Randy W. Worobo(a)</p> <p>(a)Department of Food Science, Cornell University, Ithaca, NY, USA</p> <p>(b)3M Company, St. Paul, MN, USA</p> <p>Address correspondence to Jonathan H. Sogin, jhs397@cornell.edu</p>

opencc-by-4.0Sep 2020View details →
zenodo36/100

Deadly dormmate: a case study on Bungarus candidus living among a student dormitory with implications for human safety

<p>Movement and observation data gained through radio-telemetry of a single Malayan krait (<em>Bungarus candidus</em>) among a suburban landscape (a university dormitory complex) in NE Thailand. Included: movement spatial data .csv file and photographic evidence of foraging observations, a predation events, and conflicts with humans,&nbsp;camera trap footage, and snakebite incident data .csv file.</p> <p>&nbsp;</p> <p>B.candidus_observation_data.csv file column headings:</p> <p>folderID: The Zenodo folder ID containing the photographic evidence of events.</p> <p>obvdate: Date of observation (mm/dd/yyyy)</p> <p>obvtime: Time of observation (24hr)</p> <p>easting_utm: UTM easting (UTM Zone 48N; Datum WGS84)</p> <p>northing_utm: UTM northing&nbsp;(UTM Zone 48N; Datum WGS84)</p> <p>gps_accuracy: Accuracy of GPS location (m)</p> <p>notes: Comments and details on events/observations</p> <p>&nbsp;</p> <p>BUCA28_movement_data.csv file column headings:</p> <p>Datetime: Date and time when the snake was located (mm/dd/yyyy hh:mm)</p> <p>Easting: UTM easting (UTM Zone 48N; Datum WGS84)</p> <p>Northing: UTM northing&nbsp;(UTM Zone 48N; Datum WGS84)</p> <p>Behavior: Either the animal&rsquo;s behavior observed during the location check (sheltering, foraging, or feeding) or type of other significant locations (capture or release sites)</p> <p>Habitat_Type: Land-use type where the snake was located</p> <p>&nbsp;</p> <p>Snakebite_incident_data_SUT_Dormitories.csv file column headings:</p> <p>Date: Date the snakebite occurred was located (mm/dd/yyyy)</p> <p>Time: Time (ICT)&nbsp;the snakebite occurred (hh:mm)</p> <p>Location: Brief location description where the incident occurred at Suranaree University of Technology</p> <p>Mesohabitat Description: Brief description of the scene where the bite occurred</p> <p>&nbsp;Snake species confirmed?: if responsible species known (Yes) or unknown (No)</p> <p>Snake Species: Identified responsible snake species (if known)</p> <p>If not confirmed, suspected species responsible: Species most likely to be responsible based on known snake species at SUT, the time the bite occurred,&nbsp;and bite symptoms.</p> <p>Bite Location: Where on the body the victim was bitten</p> <p>Envenomation Symptoms: Brief description of bite symptoms (note: none were severe/dangerous cases)</p> <p>Fang Puncture Marks?: Brief description of whether fang puncture marks were visible, and if so, how many punctures</p> <p>Notes and Photos: Brief further notes on how the bite occurred, and in the case of the bite by C. maculiceps, the corresponding&nbsp;Zenodo folder ID containing the photographic evidence (of the snake and dormitory bite location [during daylight]).</p> <p>&nbsp;</p> <p>&nbsp;</p>

opencc-by-4.0Sep 2020View details →
dryad36/100

Contrasting association of Leptin receptor polymorphisms and haplotypes with polycystic ovary syndrome in Bahraini and Tunisian women: a case–control study

<p><span><b>Background</b>. This study examined the contribution of ethnicity to the association of leptin receptor gene (<i>LEPR)</i> genetic variants with polycystic ovary syndrome (PCOS) in Tunisian and Bahraini Arabic-speaking women.<b> </b></span></p> <p><span><b>Methods. </b>Subjects consisted of 320 women with PCOS, and 446 eumenorrhic women from Tunisia, and 242 women with PCOS and 238 controls from Bahrain. Genotyping of (exonic) rs1137100 and rs1137101 and (intronic) rs2025804 <i>LEPR</i> variants was done by allelic exclusion.<b> </b></span></p> <p><span><b>Results. </b>The minor allele frequencies of rs1137100 and rs1137101 were significantly different between PCOS cases and control women from Bahrain but not Tunisia, and <i>LEPR</i> rs1137101 was associated with increased PCOS susceptibility only in Bahraini subjects. Furthermore, rs1137100 was associated with decreased PCOS risk among Bahrainis under codominant and recessive models; rs1137100 was negatively associated with PCOS in Tunisians after controlling for testosterone. In addition, rs2025804 was associated with increased PCOS risk among Tunisian but not Bahraini women, after adjusting for key covariates. Negative correlation was seen between rs1137101 and triglycerides in Tunisians, while HOMA-IR and insulin correlated with rs2025804 and rs1137101 among Bahraini subjects, and rs1137101 correlated with estradiol and prolactin. Taking TAG haplotype as common, positive association of TAA and negative association of TGG haplotype with PCOS was seen among Bahraini women; no three-locus PCOS-associated haplotypes were found in Tunisians.<b> </b></span></p> <p><span><b>Conclusions. </b>T<span>his study is the first to demonstrate the contribution of ethnicity to the association of <i>LEPR</i> gene variants with PCOS</span>, thereby highlighting the significance of controlling for ethnicity in gene association investigations.</span></p>

opencc-zeroDec 2020View details →
zenodo36/100

Enhancement of cloud-to-ground lightning activity caused by the urban effect: a case study in the Beijing metropolitan area

<p>The dataset here includes land-surface temperature, wind field, precipitation, UV aerosol index, and lightning information analyzed in the paper &quot;<strong>Enhancement of cloud-to-ground lightning activity </strong><strong>caused by the urban effect: a case study in</strong>&nbsp;<strong>the Beijing metropolitan area</strong>&quot;.</p>

opencc-by-4.0Jan 2021View details →
dryad36/100

Data from: Evolution and disappearance of sympatric Coregonus albula in a changing environment - a case study of the only remaining population pair in Sweden

<p>During the past 50 years Fennoscandian populations of spring-spawning Baltic cisco (<em>Coregonus albula</em>), sympatric to common autumn-spawners, have declined or disappeared; e.g., three out of four known spring-spawning populations in Sweden are regarded as extinct. Over the same period, climate has changed and populations have been subject to other anthropogenic stressors. We compared historic (1960s) and recent (1990-2000s) morphological data from the still existent sympatric cisco populations in Lake Fegen, Sweden. Phenotypic changes were found for spring-spawners making them more similar to the sympatric autumn-spawners (that had remained virtually unchanged). Based on results for other salmoniform fishes, a phenotypically plastic response to increased temperature during early development appears unlikely. The recent material was also analysed with microsatellite markers; long-term effective population size in spring-spawners was estimated to be about 20 times lower than autumn-spawners, with signs of long-term gene flow in both directions and a recent genetic bottleneck in spring-spawners. The change towards a less distinct phenotype in spring-spawners is suggested to reflect a recent increase in gene flow from autumn-spawners. Time since divergence was estimated to only c. 1 900 years (95% CI: 400 – 5 900), but still the Fegen populations represent the most morphologically and genetically distinct sympatric populations studied. Consequently, we hypothesise that less distinct population pairs can be even younger, and that spring-spawning may have repeatedly evolved and disappeared in several lakes since the end of the last glaciation, concurrent with changed environmental conditions.</p>

opencc-zeroJan 2021View details →
dryad36/100

Bioinformatic pipeline from: Increasing confidence for discerning species and population compositions from metabarcoding assays of environmental samples: case studies of fishes in the Laurentian Great Lakes and Wabash River

<p>Community composition data are essential for conservation management, facilitating identification of rare native and invasive species, along with abundant ones. However, traditional capture-based morphological surveys require considerable taxonomic expertise, are time consuming and expensive, can kill rare taxa and damage habitats, and often are prone to false negatives. Alternatively, metabarcode assays can be used to assess the genetic identity and compositions of entire communities from environmental samples, comprising a more sensitive, less damaging, and relatively time- and cost-efficient approach. However, there is a trade-off between the stringency of bioinformatic filtering needed to remove false positives and the potential for false negatives. The present investigation thus evaluated use of four mitochondrial (mt) DNA metabarcode assays and a customized bioinformatic pipeline to increase confidence in species identifications by removing false positives, while achieving high detection probability. Positive controls were used to calculate sequencing error, and results that fell below those cutoff values were removed, unless found with multiple assays. The performance of this approach was tested to discern and identify North American freshwater fishes using lab experiments (mock communities and aquarium experiments) and processing of a bulk ichthyoplankton sample. The method then was applied to field environmental (e)DNA water samples taken concomitant with electrofishing surveys and morphological identifications. This protocol detected 100% of species present in concomitant electrofishing surveys in the Wabash River and an additional 21 that were absent from traditional sampling. Using single 1 L water samples collected from just four locations, the metabarcoding assays discerned 73% of the total fish species that were discerned in comparison to four months of an extensive electrofishing river survey in the Maumee River, along with an additional nine species. In both rivers, total fish species diversity was best resolved when all four metabarcode assays were used together, which identified 35 additional species missed by electrofishing. Ecological distinction and diversity levels among the fish communities also were better resolved with the metabarcode assays than with morphological sampling and identifications, especially with the combined assays. At the population-level, metabarcode analyses targeting the invasive round goby <i>Neogobius melanostomus</i> and the silver carp <i>Hypophthalmichthys molitrix</i> identified all population haplotype variants found using Sanger sequencing of morphologically sampled fish, along with additional intra-specific diversity, meriting further investigation. Overall findings demonstrated that the use of multiple metabarcode assays and custom bioinformatics that filter potential error from true positive detections improves confidence in evaluating biodiversity.</p>

opencc-zeroAug 2021View details →
dryad36/100

Data from: Refining trophic dynamics through multi-factor Bayesian mixing models: a case study of subterranean beetles.

<p>Food web dynamics are vital in shaping the functional ecology of ecosystems. However, trophic ecology is still in its infancy in groundwater ecosystems due to the cryptic nature of these environments. To unravel trophic interactions between subterranean biota, we applied an interdisciplinary Bayesian mixing model design (multi-factor BMM) based on the integration of faunal C and N bulk tissue stable isotope data (δ<sup>13</sup>C and δ<sup>15</sup>N) with radiocarbon data (Δ<sup>14</sup>C), and prior information from metagenomic analyses. We further compared outcomes from multi-factor BMM with a conventional isotope double proxy mixing model (SIA BMM), triple proxy (δ<sup>13</sup>C, δ<sup>15</sup>N and Δ<sup>14</sup>C, multi-proxy BMM) and double proxy combined with DNA prior information (SIA+DNA BMM) designs. Three species of subterranean beetles (<i>Paroster macrosturtensis</i>, <i>Paroster mesosturtensis</i> and <i>Paroster microsturtensis</i>) and their main prey items Chiltoniidae<i> </i>amphipods (AM1: <i>Scutachiltonia axfordi</i> and AM2: <i>Yilgarniella sturtensis</i>), cyclopoids and harpacticoids from a calcrete in Western Australia were targeted. Diet estimations from stable isotope only models indicated homogeneous patterns with modest preferences for amphipods as prey items. Multi-proxy BMM suggested increased - and species-specific - predatory pressures on amphipods coupled with high rates of scavenging/predation on sister species. SIA+DNA BMM showed marked preferences for amphipods AM1 and AM2 and reduced interspecific scavenging/predation on <i>Paroster </i>species. Multi-factorial BMM revealed the most precise estimations (lower overall SD and very marginal beetles' interspecific interactions), indicating consistent preferences for amphipods AM1 in all the beetles' diets. Incorporation of genetic priors allowed crucial refining of the feeding preferences, while integration of more expensive radiocarbon data as a third proxy (when combined with genetic data) produced more precise outcomes but close dietary reconstruction to that from SIA+DNA BMM. Further multidisciplinary modelling from other groundwater environments will help elucidate the potential behind these designs and bring light to the feeding ecology of one the most vital ecosystems worldwide.</p>

opencc-zeroJul 2021View details →
zenodo36/100

FIG. 6 in Trophic position of some Late Devonian-Carboniferous (Mississippian) conodonts revealed on carbon organic matter isotope signatures: a case study of the East European basin

FIG. 6. — Bivariate plot for bulk carbonate δ13Cand conodont δ13Cvalues. carb org

opencc-zeroOct 2020View details →
zenodo36/100

FIG. 4 in Trophic position of some Late Devonian-Carboniferous (Mississippian) conodonts revealed on carbon organic matter isotope signatures: a case study of the East European basin

FIG. 4. — Organic carbon isotope compositions of conodonts measured in the study.

opencc-zeroOct 2020View details →
zenodo36/100

A Case Study on the Communication of a Local Software Developer Team

<p>Raw data and scripts for the analysis of the paper &quot;A Case Study on the Communication of a Local Software Developer Team&quot;</p> <p>The files with the extension &quot;list&quot; contain the communication of the according channel. For example, &quot;talks.list&quot; contains all the recorded talks. The first two columns of a file contains the communication patners, the third column the date, the fourth the time of day. The sixth column contains the duration of a talk, the seventh column the rough topic, followed by the id of the event in column eight. Since often, additional developers entered the conversation, which we recorded as extra event, we have summarized the events to one conversation, denoted by the last column. That is, the last column contains the id of the conversation.</p> <p>The file analysis.Rmd contains the script that we used to analyze the data and create the plots. We used the library coronet (available at GitHub:https://github.com/ecklbarb/coronet/tree/read-data-from-company). The input data must have the folder structure as discribed in the Readme of the coronet project.</p> <p>The file analysis.Rmd must be copied in the folder of the coronet library.</p>

opencc-by-4.0Jan 2021View details →
zenodo36/100

The input sounding and synthetic AMV data for the idealized case study

<p>This is a data repository in support of the article &quot;Impact of Assimilating High-Resolution Atmospheric Motion Vectors on Convective Scale Short-Term Forecasts. Part I: Observing System Simulation Experiment (OSSE)Impact of Assimilating High-Resolution Atmospheric Motion Vectors on Convective Scale Short-Term Forecasts. Part I: Observing System Simulation Experiment (OSSE)&quot; submitted to&nbsp;AGU <em>J. of Advances in Modeling of Earth Systems.&nbsp;</em></p> <p>The data set consists of</p> <ul> <li>The input sounding data for the truth simulation of an idealized supercell strom (input_sounding).</li> <li>The simulated&nbsp;AMV observations with the resolutions of 10km, 20km, 30km and 40km are contained in the zipped files.</li> </ul>

opencc-by-4.0Feb 2021View details →
zenodo36/100

The Multi-Radar Multi-Sensor (MRMS) and the Stage IV rainfall products, and the aggregate forecast statistics for the three real case studies

<p>This is a data repository in support of the article &quot;Impact of Assimilating High-Resolution Atmospheric Motion Vectors on Convective Scale Short-Term Forecasts. Part II: Assimilation Experiments of GOES-16 Satellite Derived Winds&quot; submitted to&nbsp;AGU&nbsp;<em>J. of Advances in Modeling of Earth Systems.&nbsp;</em></p> <p>The data set consists of</p> <ul> <li>The Multi-Radar Multi-Sensor (MRMS) and the Stage IV rainfall products used for validation in the three real case studies.</li> <li>The aggregate forecast statistics for composite reflectivity and APCP&nbsp;for the three real case studies are contained in the zipped files.</li> </ul>

opencc-by-4.0Feb 2021View details →
dryad36/100

Data from: Anthropogenic increases in nutrients alter sexual selection dynamics: a case study in butterflies

Anthropogenic increases in nutrient availability offer opportunities to study evolutionary shifts in sexual selection dynamics in real time. A rapid increase in nutrient availability may reduce the utility of condition-dependent ornaments as signals of quality and lessen any nutritional benefits to females from re-mating. We explored these ideas using cabbage white butterflies, focusing on nitrogen as a nutrient, as it is important to this species in not only in ornamentation but also as a key macronutrient transferred in spermatophores. We compared a non-agricultural population to an agricultural population, which has seen an increase in nitrogen availability over the last 40 years due in part to fertilizer application. When reared in a common garden, both male and female butterflies from the agricultural population allocate significantly more to nitrogen-rich wing pigments used in mate choice. However, this increase in allocation is not correlated with an increase in the ability to assimilate nitrogen from their diet. Spermatophore counts from wild females show that females in the agricultural population rarely mate more than once, while those in the non-agricultural population are much more likely to be polyandrous. Similarly, the structure in the female reproductive tract that processes spermatophores has evolved lower tooth density in the agricultural population, consistent with the idea that these females benefit less from high throughput of spermatophores. These results suggest that anthropogenic increases in nutrient availability have altered sexual selection dynamics and the evolution of sexual traits: investment in ornamentation has increased, and there has been a decline in the nutritional benefits of re-mating in females.

opencc-zeroDec 2017View details →
dryad36/100

Data from: Bayesian quantification of ecological determinants of outcrossing in natural plant populations: computer simulations and the case study of biparental inbreeding in English yew

The mating system is a central parameter of plant biology because it shapes their ecological and evolutionary properties. Therefore, determining ecological variables that influence the mating system is important for a deeper understanding of the functioning of plant populations. Here, using old concepts and recent statistical developments, we propose a new statistical tool to make inferences about ecological determinants of outcrossing in natural plant populations. The method requires co-dominant genotypes of seeds collected from maternal plants within different locations. Using extensive computer simulations, we demonstrated that the method is robust to the issues expected for real-world data, including the Wahlund effect, inbreeding and genotyping errors such as allele dropout and allele misclassification. Furthermore, we showed that the estimates of ecological effects and outcrossing rates can be severely biased if genotyping errors and genetic differentiation are not treated explicitly. Application of the new method to the case study of a dioecious tree (Taxus baccata) allowed revealing that female trees that grow in lower local densities have a greater tendency towards mating with relatives. Moreover, we also demonstrated that biparental inbreeding is higher in populations that are characterised by a longer mean distance between trees and a smaller mean trunk perimeter. We found these results to agree with both the theoretical predictions and the history of English yew.

opencc-zeroJul 2019View details →
dryad36/100

Data from: Experimental study of shear and hydraulic bonding strength between casing and cement under complex temperature and pressure conditions

The cement sheath plays a vital role in preventing gas channelling. It is important to understand the interfacial bonding between the casing and cement sheath when the downhole temperature and pressure change. This paper demonstrates the results of an experimental study to investigate the effect of high-temperature and high-pressure (HTHP) and their variations on the cement sheath interfacial bonding strength (CSIBS). An experimental device was developed that is used to test the shear and hydraulic bonding strength with the method of uniaxial compression and gas channelling. The results show that both temperature and pressure have a significant influence on the CSIBS. As the curing temperature increases with a constant curing time or as the curing time increases with a constant curing temperature, the CSIBS first increases and then converges to a stable value. The casing roughness has a crucial effect on the shear bonding strength but little effect on the hydraulic bonding strength. Though the CSIBS decreases obviously with the decrease in temperature, it undergoes little change when the temperature first increases and then recovers to the initial value. When the internal casing pressure decreases to a certain value or first increases to a certain value followed by recovery to the initial state, the hydraulic bonding strength tends to be 0 MPa, which means that the interface undergoes debonding between the casing and cement.

opencc-zeroApr 2020View details →
dryad36/100

Data from: Is MHC diversity a better marker for conservation than neutral genetic diversity? a case study of two contrasting dolphin populations

Genetic diversity is essential for populations to adapt to changing environments. Measures of genetic diversity are often based on selectively neutral markers, such as microsatellites. Genetic diversity to guide conservation management, however, is better reflected by adaptive markers, including genes of the major histocompatibility complex (MHC). Our aim was to assess MHC and neutral genetic diversity in two contrasting bottlenose dolphin (Tursiops aduncus) populations in Western Australia—one apparently viable population with high reproductive output (Shark Bay) and one with lower reproductive output that was forecast to decline (Bunbury). We assessed genetic variation in the two populations by sequencing the MHC class II DQB, which encompasses the functionally important peptide binding regions (PBR). Neutral genetic diversity was assessed by genotyping twenty‐three microsatellite loci. We confirmed that MHC is an adaptive marker in both populations. Overall, the Shark Bay population exhibited greater MHC diversity than the Bunbury population—for example, it displayed greater MHC nucleotide diversity. In contrast, the difference in microsatellite diversity between the two populations was comparatively low. Our findings are consistent with the hypothesis that viable populations typically display greater genetic diversity than less viable populations. The results also suggest that MHC variation is more closely associated with population viability than neutral genetic variation. Although the inferences from our findings are limited, because we only compared two populations, our results add to a growing number of studies that highlight the usefulness of MHC as a potentially suitable genetic marker for animal conservation. The Shark Bay population, which carries greater adaptive genetic diversity than the Bunbury population, is thus likely more robust to natural or human‐induced changes to the coastal ecosystem it inhabits.

opencc-zeroMay 2019View details →
dryad36/100

Data from: Insect pollinators show constancy for different flower traits between the most‐ and less‐preferred plants: a case study of the long‐proboscid tangle‐veined fly

<p>1. The coevolution of insect pollinators and their host plants is a typical example of natural selection; however, it remains unclear as to how insect pollinators avoid overdependence on one peculiar plant. As most insect pollinators exhibit a diet breadth when showing flower constancy, to determine the difference and similarity of most and less-preferred flowers by insect pollinators may be helpful to understand their trade-off between flower constancy and overdependence.</p> <p>2. We addressed this question in the long-proboscid tangle-veined fly (<i>Nemetrinus spp.</i>). Dietary investigation indicates that the flies show constancy for the morphological characteristic of the <i>Delphinium caeruleum</i>, which is the most preferred plant for this Nemestrinidae fly that has blue, long-tubed flowers.</p> <p>3. In a colour selection experiment, focal individuals showed obvious preference for white, which is the colour of less-preferred flowers by the fly in the natural environment. In a scent selection experiment, focal individuals showed obvious preference for <i>D. caeruleum </i>and <i>Dracocephalum heterophyllum</i>, but avoidance to <i>Dasiphora</i><i> fruticosa</i> and <i>Dasiphora davurica</i>. This indicates that long-proboscid tangle-veined flies can forage on other flowers, even the existing of constancy for <i>D. caeruleum</i>, as long as they do not hate the scent. It seems that long-proboscid tangle-veined flies can maximize foraging efficiency by showing constancy for the morphological characteristic of the most preferred plant and for the scent and colour of less-preferred plants.</p> <p>4. The tradeoff of long-proboscid tangle-veined fly in selection of nectar sources may be an adaptation to the risk of overdependence on one plant in evolution.</p>

opencc-zeroApr 2020View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

ScienceDex for faculty

Your academic CV and NIH biosketch

Make your CV in your school's format and your NIH biosketch from it, then download both as Word files.