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1,891 results for “Field data”
Data from: Revising traditional theory on the link between plant body size and fitness under competition: evidence from old-field vegetation
The selection consequences of competition in plants have been traditionally interpreted based on a "size-advantage" hypothesis – that is, under intense crowding/competition from neighbors, natural selection generally favors capacity for a relatively large plant body size. However, this conflicts with abundant data, showing that resident species body size distributions are usually strongly right-skewed at virtually all scales within vegetation. Using surveys within sample plots and a neighbor-removal experiment, we tested: (1) whether resident species that have a larger maximum potential body size (MAX) generally have more successful local individual recruitment, and thus greater local abundance/density (as predicted by the traditional size-advantage hypothesis); and (2) whether there is a general between-species trade-off relationship between MAX and capacity to produce offspring when body size is severely suppressed by crowding/competition – that is, whether resident species with a larger MAX generally also need to reach a larger minimum reproductive threshold size (MIN) before they can reproduce at all. The results showed that MIN had a positive relationship with MAX across resident species, and local density – as well as local density of just reproductive individuals – was generally greater for species with smaller MIN (and hence smaller MAX). In addition, the cleared neighborhoods of larger target species (which had relatively large MIN) generally had – in the following growing season – a lower ratio of conspecific recruitment within these neighborhoods relative to recruitment of other (i.e., smaller) species (which had generally smaller MIN). These data are consistent with an alternative hypothesis based on a 'reproductive-economy-advantage' – that is, superior fitness under competition in plants generally requires not larger potential body size, but rather superior capacity to recruit offspring that are in turn capable of producing grand-offspring – and hence transmitting genes to future generations – despite intense and persistent (cross-generational) crowding/competition from near neighbors. Selection for the latter is expected to favor relatively small minimum reproductive threshold size and hence – as a tradeoff – relatively small (not large) potential body size.
Data from: Structure of a mosaic hybrid zone between the field crickets Gryllus firmus and G. pennsylvanicus
Hybrid zones provide insight into the nature of species boundaries and the evolution of barriers to gene exchange. Characterizing multiple regions within hybrid zones is essential for understanding both their history and current dynamics. Here, we describe a previously uncharacterized region of a well-studied hybrid zone between two species of field crickets, Gryllus pennsylvanicus and G. firmus. We use a combination of mitochondrial DNA sequencing, morphological data, and modeling of environmental variables to identify the ecological factors structuring the hybrid zone and define patterns of hybridization and introgression. We find an association between species distribution and natural habitat; Gryllus pennsylvanicus occupies natural habitat along forest edges and natural clearings, whereas G. firmus occupies more disturbed areas in agricultural and suburban environments. Hybridization and introgression occur across patch boundaries; there is evidence of substantial admixture both in morphological characters and mtDNA, over a broad geographic area. Nonetheless, the distribution of morphological types is bimodal. Given that F1 hybrids are viable and fertile in the lab, this suggests that strong pre-zygotic barriers are operating in this portion of the hybrid zone.
Data from: Twentieth-century changes in the genetic composition of Swedish field pea metapopulations
Landrace crops are formed by local adaptation, genetic drift and gene flow through seed exchange. In reverse, the study of genetic structure between landrace populations can reveal the effects of these forces over time. We present here the analysis of genetic diversity in 40 Swedish field pea (Pisum sativum L.) populations, either available as historical seed samples from the late nineteenth century or as extant gene bank accessions assembled in the late twentieth century. The historical material shows constant high levels of within-population diversity, whereas the extant accessions show varying, and overall lower, levels of within-population diversity. Structure and principal component analysis cluster most accessions, both extant and historical, in groups after geographical origin. County-wise analyses of the accessions show that the genetic diversity of the historical accessions is largely overlapping. In contrast, most extant accessions show signs of genetic drift. They harbor a subset of the alleles found in the historical accessions and are more differentiated from each other. These results reflect how, historically present metapopulations have been preserved during the twentieth century, although as genetically isolated populations.
Data from: Genetic and epigenetic divergence between disturbed and undisturbed subpopulations of a Mediterranean shrub: a 20-year field experiment
Little is known on the potential of ecological disturbance to cause genetic and epigenetic changes in plant populations. We take advantage of a long-term field experiment initiated in 1986 to study the demography of the shrub Lavandula latifolia, and compare genetic and epigenetic characteristics of plants in two adjacent subplots, one experimentally disturbed and one left undisturbed, 20 years after disturbance. Experimental setup was comparable to an unreplicated 'Before-After-Control-Impact' (BACI) design where a single pair of perturbed and control areas were compared. When sampled in 2005, plants in the two subplots had roughly similar ages, but they had established in contrasting environments: dense conspecific population ('Undisturbed' subpopulation) versus open area with all conspecifics removed ('Disturbed' subpopulation). Plants were characterized genetically and epigenetically using amplified fragment length polymorphism (AFLP) and two classes of methylation-sensitive AFLP (MSAP) markers. Subpopulations were similar in genetic diversity but differed in epigenetic diversity and multilocus genetic and epigenetic characteristics. Epigenetic divergence between subpopulations was statistically unrelated to genetic divergence. Bayesian clustering revealed an abrupt linear boundary between subpopulations closely coincident with the arbitrary demarcation line between subplots drawn 20 years back, which supports that genetic and epigenetic divergence between subpopulations was caused by artificial disturbance. There was significant fine-scale spatial structuring of MSAP markers in both subpopulations, which in the Undisturbed one was indistinguishable from that of AFLP markers. Genetic differences between subpopulations could be explained by divergent selection alone, while the concerted action of divergent selection and disturbance-driven appearance of new methylation variants in the Disturbed subpopulation is proposed to explain epigenetic differences. This study provides the first empirical evidence to date suggesting that relatively mild disturbances could leave genetic and epigenetic signatures on the next adult generation of long-lived plants.
Data from: Field manipulations of resources mediate the transition from intraspecific competition to facilitation
1. Population density affects individual performance, though its effects are often mixed. For sessile species, increases in population density typically reduce performance. Still, cases of positive density dependence do occur in these systems and demand explanation. The stress gradient hypothesis (SGH) predicts that under stressful conditions, positive effects of facilitation may outweigh the negative effects of competition. 2. While some elements of the SGH are well studied, its potential to explain intraspecific facilitation has received little attention. Further, there have been questions regarding whether the SGH holds if the stressor is a resource. Most studies of interactions between the environment and intraspecific facilitation have relied on natural environmental gradients; manipulative studies are much rarer. 3. To test the effects of intraspecific density and resources, we manipulated resource availability over natural population densities for the marine bryozoan Watersipora subtorquata. 4. We found negative effects of density on colony performance in low resource environments, but mainly positive density-dependence in high resource environments. By adding resources, competition effects were reduced and the positive effects of facilitation were revealed. 5. Our results suggest that resource availability mediates the relative strength of competition and facilitation in our system. We also suggest that intraspecific facilitation is more common than may be appreciated and that environmental variation may act as mediators to the balance between negative and positive density-dependence.
Data from: Genetic diversity of oilseed rape fields and feral populations in the context of coexistence with GM crops
Despite growing concern about transgenes escaping from fields, few studies have analysed the genetic diversity of crops in an agroecosystem over several years. Accurate information about the dynamics and relationship of the genetic diversity of crops in an agroecosystem is essential for risk assessment and policies concerning the containment of genetically modified crops and their coexistence with crops grown by conventional practices. Here, we analysed the genetic diversity of oilseed rape plants from fields and feral populations over 4 years in an agricultural landscape of 41 km2. We used exact compatibility and maximum likelihood assignment methods to assign these plants to cultivars. Even pure lines and hybrid cultivar seed lots contained several genotypes. The cultivar diversity in fields reflected the conventional view of agroecosystems quite well: that is, there was a succession of cultivars, some grown for longer than others because of their good performance, some used for one year and then abandoned, and others gradually adopted. Three types of field emerged: fields sown with a single cultivar, fields sown with two cultivars, and unassigned fields (too many cultivars or unassigned plants to reliably assign the field). Field plant diversity was higher than expected, indicating the persistence of cultivars that were grown for only one year. The cultivar composition of feral populations was similar to that of field plants, with an increasing number of cultivars each year. By using genetic tools, we found a link between the cultivars of field plants in a particular year and the cultivars of feral population plants in the following year. Feral populations on road verges were more diverse than those on path verges. All of these findings are discussed in terms of their consequences in the context of coexistence with genetically modified crops.
Data from: Field observations of turbulence, sand suspension and cross-shore transport under spilling and plunging breakers
Measurements of wave orbital velocity, near-bed turbulence levels and sediment suspension were obtained under plunging and spilling breakers in the outer surf zone on the beach at Vejers, Denmark. For the same range of relative wave heights and indicators of wave nonlinearity, we observed significantly larger suspended sediment concentrations and onshore-directed rates of suspended sediment transport under (long-period) plunging breakers, compared to (short-period) spilling breakers. This is consistent with the long-held understanding that, for a given beach slope, onshore transport and beach accretion is associated with longer-period waves and offshore transport and erosion is associated with shorter-period waves. An intra-wave analysis of hydrodynamics and sediment suspension revealed that the main reason for the larger suspended sediment transport rates under plunging waves was i) larger time-averaged suspended sediment loads under plunging waves, and ii) a larger difference in cumulated sediment load under the wave crest phase compared to the wave trough phase for plunging breakers. This latter difference was due to an earlier arrival at the seabed of higher levels of turbulent kinetic energy (TKE) under plunging waves compared to spilling waves. Hence, both magnitude and timing within the wave cycle of TKE production is important in a quantification of sediment transport under breaking waves. For ensemble-averaged intense suspension events, contributing roughly 50% of the total sediment suspension during individual records, we found that instantaneous near-bed sediment load was linearly related to instantaneous levels of Froude-scaled TKE.
Data from: The effect of Wolbachia on the lifetime reproductive success of its insect host in the field
Wolbachia is a widespread endosymbiont that induces dramatic manipulations of its host's reproduction. Although there has been substantial progress in the developing theory for Wolbachia–host interactions and in measuring the effects of Wolbachia on host fitness in the laboratory, there is a widely recognized need to quantify the effects of Wolbachia on the host fitness in the field. The wasp Anagrus sophiae, an egg parasitoid of planthoppers, carries a Wolbachia strain that induces parthenogenesis, but its effects on the fitness of its Anagrus host are unknown. We developed a method to estimate the realized lifetime reproductive success of female wasps by collecting them soon after they die naturally in the field, counting the number of eggs remaining in their ovaries and quantifying Wolbachia density in their body. We sampled from a highly infected A. sophiae population and found no evidence for Wolbachia virulence and possible evidence for positive effects of Wolbachia on realized reproductive success.
Data from: Fitness differences between parapatric lake and stream stickleback revealed by a field transplant
Molecular comparisons of populations diverging into ecologically different environments often reveal strong differentiation in localized genomic regions, with the remainder of the genome being weakly differentiated. This pattern of heterogeneous genomic divergence, however, is rarely connected to direct measurements of fitness differences among populations. We here do so by performing a field enclosure experiment in threespine stickleback fish residing in a lake and in three replicate adjoining streams, and displaying weak yet heterogeneous genomic divergence between these habitats. Tracking survival over 29 weeks, we consistently find that lake genotypes transplanted into the streams suffer greatly reduced viability relative to local stream genotypes and that the performance of F1 hybrid genotypes is intermediate. This observed selection against migrants and hybrids combines to a total reduction in gene flow from the lake into streams of around 80%. Overall, our study identifies a strong reproductive barrier between parapatric stickleback populations, and cautions against inferring weak fitness differences between populations exhibiting weak overall genomic differentiation.
Data from: Competitive responses of eight old-field plant species in four environments
Variation in relative competitive abilities among environments has been proposed to control the species composition of plant communities. We tested whether the competitive responses of eight species varied with fertility and disturbance in an old field. We also tested whether the competitive effects of vegetation varied with fertility and disturbance in an old field. We also tested whether the competitive effects of vegetation varied with fertility and disturbance. Plots received one of four combinations of nitrogen (added or not) and disturbance (tilled or not) in each of five years. There were 10 replicates of each treatment. In the fifth summer, transplants of eight species comprising annual and perennial forbs and grasses were grown in all four combinations of the N and disturbance treatments. Transplants were grown in subplots with all neighbors, with only roots of neighbors, or with no neighbors. Transplant roots and shoots were harvested after one summer and individual growth rates were determined. Growth rate varied significantly with the interaction among species, competition, and N, suggesting that species differed in their competitive responses and that these differences varied with N availability. Comparisons among competition treatments at each level of N showed six distinct responses in the eight species examined. The competitive effect of neighboring vegetation shifted from roots to shoots as N increased, but decreased in disturbed plots. The total effect of competition increased significantly with neighbor mass in 4 of the 32 examined (eight species in four combinations of N and disturbance). All four cases involved annuals in annual neighborhoods. The results for eight species confirmed earlier single—species diverged in their responses to competition as soil N availability varied.
Data from: Seedling recruitment in subalpine grassland forbs: predicting field regeneration behaviour from lab germination responses
Environmental cueing that restricts seed germination onto times and places where mortality risk is relatively low may have considerable selective advantage. The predictive power of lab germination responses for field regeneration behaviour is rarely tested. We screened 11 alpine grassland forbs for germination behaviours predictive of microsite and seasonal selectivity, and seed carry-over across years. The predictions were tested in a field experiment. Germination in the lab ranged from 0.05% to 67.9%, and was affected by light (5 species), temperature (6), fluctuating temperatures (4), moist chilling prior to germination (cold-stratification) (6), and dormancy-breaking by means of gibberellic acid (8). Seedling emergence in the field varied from 0.1% to 14.1%, and increased in low-competition microsites (bare-ground gaps and cut vegetation; 7 species), and showed seasonal timing (1 in autumn and 1 in spring), and seed carry-over across years (7). Lab germination responses successfully predicted microsite selectivity in the field and to some extent seed carry-over across years but not seasonal timing of germination. Gap-detecting species were generally small-seeded, low-growing, and found in unproductive habitats. Larger-seeded species germinated in all microsites but experienced increased mortality in high-competition microsites. Seed carry-over across years was lower in alpine specialists than in more widely-distributed species.
Data from: Does prey encounter and nutrient content affect prey selection in wolf spiders inhabiting Bt cotton fields?
Wolf spiders are abundant and voracious predators at the soil-plant interface in cotton crops. Among other prey, they attack late-instar larvae of the cotton bollworm Helicoverpa spp., an economically important pest. Consequently, wolf spiders in transgenic Bt cotton could provide significant biological control of Bt-resistant Helicoverpa larvae that descend to the soil to pupate. The predator-prey interactions between wolf spiders and Helicoverpa could, however, be constrained by the presence of alternative prey and intraguild predators. This study used laboratory enclosures to analyse the effect of alternative prey on predatory selection of the wolf spider Tasmanicosa leuckartii Thorell. The prey included another wolf spider Hogna crispipes Koch (potential intraguild predator), the ground cricket Teleogryllus commodus Walker (minor pest), and Helicoverpa armigera larvae (major pest). We tested if encounter rates, prey vulnerability, and prey nutritional content influenced the likelihood that a prey was attacked. In three-way food webs, Tasmanicosa encountered and attacked Teleogryllus and Helicoverpa in similar frequencies. However, in the presence of a competing intraguild predator and potential prey (Hogna) in a four-way food web, Tasmanicosa did not always attack Teleogryllus at first encounter, but still attacked Helicoverpa at each encounter. Helicoverpa (protein-poor) and Hogna (protein-rich) were consumed by Tasmanicosa in similar proportions, suggesting that Tasmanicosa might benefit from nutrient balance as an outcome of diverse prey in this food web. As Teleogryllus (protein rich) escapes quicker than Helicoverpa and Hogna, Hogna may be an easier protein-rich option than Teleogryllus. Field surveys showed that while Teleogryllus was the most common prey, wolf spiders feed on diverse insect taxa, as well as other spiders. That Tasmanicosa readily attacked Helicoverpa larvae in the presence of alternative prey is an encouraging result that supports the potential of Tasmanicosa predation to assist in the control of Bt-resistant Helicoverpa larvae and thereby inhibit the proliferation and spread of resistance.
Data from: Taking plant-soil feedbacks to the field in a temperate grassland
Plant-soil feedbacks (PSFs) involve changes to the soil wrought by plants, which change biotic and abiotic properties of the soil, affecting plants that grow in the soil at a later time. The importance of PSFs for understanding ecosystem functioning has been the focus of much recent research, for example, in predicting the consequences for agricultural production, biodiversity conservation, and plant population dynamics. Here, we describe an experiment designed to test PSFs left by plants with contrasting traits under field conditions. This is one of the first, large- scale field experiments of its kind. We removed the existent plant community and replaced it with target plant communities that conditioned the soil. These communities consisted of contrasting proportions of grass and forb cover and consisted of either fast- or slow-growing plants, in accordance with the plant economics spectrum. We chose this well-established paradigm because plants on opposite ends of this spectrum have developed contrasting strategies to cope with environmental conditions. This means they differ in their feedbacks with soil abiotic and biotic factors. The experimental procedure was repeated in two successive years in two different subplots in order to investigate temporal effects on soils that were conditioned by the same plant community. Our treatments were successful in creating plant communities that differed in their total percentage cover based on temporal conditioning, percentage of grasses versus forbs, and percentage of fast- versus slow-growing plants. As a result, we expect that the influence of these different plant communities will lead to different PSFs. The unique and novel design of this experiment allows us to simultaneously test for the impacts of temporal effects, plant community composition and plant growth strategy on PSFs. Here, we describe the experimental design and demonstrate why this effective design is ideal to advance our understanding of PSFs in the field.
Data from: Reduced tillage, but not organic matter input, increased nematode diversity and food web stability in European long-term field experiments
Soil nematode communities and food web indices can inform about the complexity, nutrient flows and decomposition pathways of soil food webs, reflecting soil quality. Relative abundance of nematode feeding and life-history groups are used for calculating food web indices, i.e. maturity index (MI), enrichment index (EI), structure index (SI) and channel index (CI). Molecular methods to study nematode communities potentially offer advantages compared to traditional methods in terms of resolution, throughput, cost and time. In spite of such advantages, molecular data have not often been adopted so far to assess the effects of soil management on nematode communities and to calculate these food web indices. Here, we used high-throughput amplicon sequencing to investigate the effects of tillage (conventional vs reduced) and organic matter addition (low vs high) on nematode communities and food web indices in ten European long-term field experiments and we assessed the relationship between nematode communities and soil parameters. We found that nematode communities were more strongly affected by tillage than by organic matter addition. Compared to conventional tillage, reduced tillage increased nematode diversity (23% higher Shannon diversity index), nematode community stability (12% higher MI), structure (24% higher SI), and the fungal decomposition channel (59% higher CI), and also the number of herbivorous nematodes (70% higher). Total and labile organic carbon, available K and microbial parameters explained nematode community structure. Our findings show that nematode communities are sensitive indicators of soil quality and that molecular profiling of nematode communities has the potential to reveal the effects of soil management on soil quality.
Data from: Sex determination in the wild: a field application of loop-mediated isothermal amplification successfully determines sex across three raptor species
PCR-based methods are the most common technique for sex determination of birds. Although these methods are fast, easy and accurate, they still require special facilities that preclude their application outdoors. Consequently, there is a time lag between sampling and obtaining results that impedes researchers to take decisions in situ and in real time considering individuals' sex. We present an outdoor technique for sex determination of birds based on the amplification of the duplicated sex-chromosome-specific gene Chromo-Helicase-DNA binding protein using a loop-mediated isothermal amplification (LAMP). We tested our method on Griffon Vulture (Gyps fulvus), Egyptian Vulture (Neophron percnopterus) and Black Kite (Milvus migrans) (family Accipitridae). We introduce the first fieldwork procedure for sex determination of animals in the wild, successfully applied to raptor species of three different subfamilies using the same specific LAMP primers. This molecular technique can be deployed directly in sampling areas because it only needs a voltage inverter to adapt a thermo-block to a car lighter and results can be obtained by the unaided eye based on colour change within the reaction tubes. Primers and reagents are prepared in advance to facilitate their storage at room temperature. We provide detailed guidelines how to implement this procedure, which is simpler (no electrophoresis required), cheaper and faster (results in c. 90 min) than PCR-based laboratory methods. Our successful cross-species application across three different raptor subfamilies posits our set of markers as a promising tool for molecular sexing of other raptor families and our field protocol extensible to all bird species.
Data from: Hypothesis-driven and field-validated method to prioritize fragmentation mitigation efforts in road projects
The active field of connectivity conservation has provided numerous methods to identify wildlife corridors with the aim of reducing the ecological effect of fragmentation. Nevertheless, these methods often rely on untested hypotheses of animal movements, usually fail to generate fine-scale predictions of road crossing sites, and do not allow managers to prioritize crossing sites for implementing road fragmentation mitigation measures. We propose a new method that addresses these limitations. We illustrate this method with data from southwestern Gabon (central Africa). We used stratified random transect surveys conducted in two seasons to model the distribution of African forest elephant (Loxodonta cyclotis), forest buffalo (Syncerus caffer nanus), and sitatunga (Tragelaphus spekii) in a mosaic landscape along a 38.5 km unpaved road scheduled for paving. Using a validation data set of recorded crossing locations, we evaluated the performance of three types of models (local suitability, local least-cost movement, and regional least-cost movement) in predicting actual road crossings for each species, and developed a unique and flexible scoring method for prioritizing road sections for the implementation of road fragmentation mitigation measures. With a data set collected in <10 weeks of fieldwork, the method was able to identify seasonal changes in animal movements for buffalo and sitatunga that shift from a local exploitation of the site in the wet season to movements through the study site in the dry season, whereas elephants use the entire study area in both seasons. These three species highlighted the need to use species- and season-specific modeling of movement. From these movement models, the method ranked road sections for their suitability for implementing fragmentation mitigation efforts, allowing managers to adjust priority thresholds based on budgets and management goals. The method relies on data that can be obtained in a period compatible with environmental impact assessment constraints, and is flexible enough to incorporate other potential movement models and scoring criteria. This approach improves upon available methods and can help inform prioritization of road and other linear infrastructure segments that require impact mitigation methods to ensure long-term landscape connectivity.
Data for "Advanced momentum sampling and Maslov phases for a precise semiclassical model of strong-field ionization"
<p>Data and plot scripts used to produce the figures in "Advanced momentum sampling and Maslov phases for a precise semiclassical model of strong-field ionization", available in preprint on arXiv <a href="https://doi.org/10.48550/arXiv.2311.01845">https://doi.org/10.48550/arXiv.2311.01845.</a></p><p>Abstract: Recollision processes are fundamental to strong-field physics and attoscience, thus models connecting recolliding trajectories to quantum amplitudes are a crucial part in furthering understanding of these processes. We report developments in the semiclassical path-integral-based Coulomb quantum-orbit strong-field approximation model for strong-field ionization by including an additional phase known as Maslov's phase and implementing a new solution strategy via Monte-Carlo-style sampling of the initial momenta. In doing so, we obtain exceptional agreement with solutions to the time-dependent Schrödinger equation for hydrogen, helium, and argon. We provide an in-depth analysis of the resulting photoelectron momentum distributions for these targets, facilitated by the quantum-orbits arising from the solutions to the saddle-point equations. The analysis yields a new class of rescattered trajectories that includes the well-known laser-driven long and short trajectories, along with novel Coulomb-driven rescattered trajectories. By virtue of the precision of the model, it opens the door to detailed investigations of a plethora of strong-field phenomena such as photoelectron holography, laser-induced electron diffraction and high-order above threshold ionization.</p><p>For more information on the files and their content, see the README file.</p>
Underlying data for "Evaluation of solvation free energies for small molecules with the AMOEBA polarizable force field"
<p>This dataset provides the parameters and results generated for the study "Evaluation of solvation free energies for small molecules with the AMOEBA polarizable force field"</p> <p>Contents of dataset:<br /> PARAMETERS.tar.gz<br /> A gzipped and tar'd directory with the parameters of all solutes sorted by solvent for AMOEBA and GAFF force field. This parameters directory is distributed to 4 different subdirectories: a)chloroform (21 solutes) b)toluene (21 solutes) c)dmso (6 solutes) d)acetonitrile (6 solutes). Each solvent includes two set of parameters for each solute (AMOEBA and GAFF).</p> <p>RESULTS.tar.gz<br /> A gzipped and tar'd directory with the solvation free energy results of all solutes in kcal/mol, with AMOEBA and GAFF force fields, for each solvent, in text format. A single set of conditions for a single solute is one row in the text files. The first column represents the experimental data, the remaining columns (2, 3 and 4) correspond to the three repeat simulations.</p>
Dataset for Quantitative Trait Loci Associated with Lodging in Dry Field Peas. Data for PR Population (Carerra x Striker).
<p>Dataset for Quantitative Trait Loci Associated with Lodging in Dry Field Peas. Data for PR Population (Carerra x Striker). Here is data on lodging, height, stem diameter, side branch diameter, and epicotyl diameter for both site years with the PR population.</p>
Dataset for Quantitative Trait Loci Associated with Lodging, Stem Strength, Yield, and Other Important Agronomic Traits in Dry Field Peas with data for 330 markers
<p>Dataset for Quantitative Trait Loci Associated with Lodging, Stem Strength, Yield, and Other Important Agronomic Traits in Dry Field Peas with data for 330 markers. This dataset is associated with the dissertation entitled, Quantitative Trait Loci Associated with Lodging, Stem Strength, Yield, and Other Important Agronomic Traits in Dry Field Peas.</p>
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.