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Figure 2 in Colour variations in the European tree frog, Hyla arborea (Linnaeus, 1758), from two small adjacent ponds in the Vojvodina province, Serbia
Figure 2: Example of high density of Tree frogs on the reeds. Photo: Aleksandar Simović.
Figure 5 in Colour variations in the European tree frog, Hyla arborea (Linnaeus, 1758), from two small adjacent ponds in the Vojvodina province, Serbia
Figure 5. Almost completely black Hyla arborea. Photos: Aleksandar Simović and Sonja Đorđević.
Figure 4 in Colour variations in the European tree frog, Hyla arborea (Linnaeus, 1758), from two small adjacent ponds in the Vojvodina province, Serbia
Figure 4. Two grayish individuals. Photos: Aleksandar Simović and Sonja Đorđević.
Fig. 12 in New records of some insects from the Strandzha Mts and adjacent Black Sea coast
Fig. 12. Tetanocera arrogans from locality No. 22. Photo: Zbyněk Kejval
Fig. 11 in New records of some insects from the Strandzha Mts and adjacent Black Sea coast
Fig. 11. Minettia longipennis from locality No. 26. Photo: Zbyněk Kejval.
Fig. 10 in New records of some insects from the Strandzha Mts and adjacent Black Sea coast
Fig. 10. Minettia bulgarica from locality No. 26. Photo: Zbyněk Kejval
Fig. 9 in New records of some insects from the Strandzha Mts and adjacent Black Sea coast
Fig. 9. Homoneura limnea from locality No. 26. Photo: Zbyněk Kejval.
Fig. 1 in The herpetofauna of the Baja California Peninsula and its adjacent islands, Mexico: composition, distribution, and conservation status
Fig. 1. Geographic regions of the Baja California Peninsula, Mexico.
Fig. 10 in The herpetofauna of the Baja California Peninsula and its adjacent islands, Mexico: composition, distribution, and conservation status
Fig. 10. View of the Magdalena Region at La Purisima, Baja California Sur. Photo by Gerardo Marrón.
Fig. 2 in A geometric morphometric study of the wing shapes of Pieris rapae (Lepidoptera: Pieridae) from the Qinling Mountains and adjacent regions: An environmental and distance-based consideration
Fig. 2. Distribution of landmarks on P. rapae forewing and hind wing.
Data on stock assessment and catches of blue whiting in Northeast Atlantic and adjacent waters 1981-2019
<p>Data on stock assessment and catches of blue whiting in Northeast Atlantic and adjacent waters 1981-2019 used for development of Climate Adaptation Plans (CAPs) in the Northeast Atlantic pelagic case study in the ClimeFish project </p>
Figure 1 in Fish Fauna of D'ering Memorial Wildlife Sanctuary and adjacent areas, Arunachal Pradesh, India
Figure 1. Map of the D'Ering Memorial Wildlife Sanctuary, showing the study sites.
Fig. 5 in Revision of the genus Thinophilus Wahlberg (Diptera: Dolichopodidae) from Singapore and adjacent regions: A long term study with a prudent reconciliation of a genetic to a classic morphological approach
Fig. 5. Thinophilus apicatus sp. nov. Phenology during a 2-year survey (MIP).
Fig. 2 in Revision of the genus Thinophilus Wahlberg (Diptera: Dolichopodidae) from Singapore and adjacent regions: A long term study with a prudent reconciliation of a genetic to a classic morphological approach
Fig. 2. Thinophilus apicatus sp. nov., male habitus.
FIGURE 5 in A new species of Knodus (Characiformes: Characidae), with deep genetic divergence, from the Mearim and Munim river basins, Northeastern Brazil, and evidence for hidden diversity in adjacent river basins
FIGURE 5 | Geographical distribution of Knodus guajajara.
Whole-mantle P-wave isotropic and anisotropic tomography beneath Japan and adjacent regions
<p>Dear readers,</p> <p>A file named "Japan_ISO.dat" contains whole-mantle P-wave isotropic tompgraphy beneath Japan and surrounding regions.</p> <p>The data format is as follows:<br>1st column: depth (km) (F8.2)<br>2nd column: latitude (deg) (F8.2)<br>3rd column: longitude (deg) (F8.2)<br>4th column: dVp (%) (F8.2)<br>5th column: Ray hit count (I8)</p> <p>These are values on grid points used for tomographic inversion.</p> <p>A file named "Japan_AAN_iso.dat" contains isotropic component of whole-mantle P-wave azimuthal anisotropy (AAN) tompgraphy beneath Japan and surrounding regions. </p> <p>The data format is as follows:<br>1st column: depth (km) (F8.2)<br>2nd column: latitude (deg) (F8.2)<br>3rd column: longitude (deg) (F8.2)<br>4th column: dVp (%) (F8.2)<br>5th column: Ray hit count (I8)</p> <p>These are values on grid points used for tomographic inversion.</p> <p>A file named "Japan_AAN_ai.dat" contains anisotropic component of whole-mantle P-wave azimuthal anisotropy (AAN) tompgraphy beneath Japan and surrounding regions. </p> <p>The data format is as follows:<br>1st column: depth (km) (F10.3)<br>2nd column: latitude (deg) (F10.3)<br>3rd column: longitude (deg) (F10.3)<br>4th column: Anisotropic amplitude (%) (F10.3)<br>5th column: Fast velocity direction (deg) (F10.3)</p> <p>These values are obtained by interpolation from the values at surrounding anisotropic grid points used for tomographic inversion.</p> <p>We hope it is useful to you.</p> <p>Kind wishes,</p> <p>Genti Toyokuni & Dapeng Zhao<br>Tohoku University, Japan<br>E-mail: toyokuni@tohoku.ac.jp</p> <p>Reference:<br>Toyokuni, G., Zhao, D., & Takada, D. (2024).<br>Whole-mantle isotropic and anisotropic tomography beneath Japan and adjacent regions.<br>Journal of Geophysical Research: Solid Earth, under review.</p>
Table 1 in Notes on the fauna of beetles (Insecta, Coleoptera) adjacent to the territory of the Mordovia State Nature Reserve
<p>Table 1 Composition of Coleopterous insect fauna in the vicinity of the Mordovia Nature Reserve ТабΛица 1 Состав фауны жесткокрыΛых насекомых в окрестностях МорÁовского заповеÁника</p><table><tbody><tr><th>Family</th><th>Number of species</th></tr></tbody><tbody><tr><th>Carabidae</th><td>115</td></tr><tr><th>Hydrophilidae</th><td>2</td></tr><tr><th>Histeridae</th><td>1</td></tr><tr><th>Silphidae</th><td>7</td></tr><tr><th>Staphylinidae</th><td>6</td></tr><tr><th>Lucanidae</th><td>1</td></tr><tr><th>Geotrupidae</th><td>1</td></tr><tr><th>Scarabaeidae</th><td>15</td></tr><tr><th>Byrrhidae</th><td>2</td></tr><tr><th>Heteroceridae</th><td>1</td></tr><tr><th>Elateridae</th><td>12</td></tr><tr><th>Cantharidae</th><td>2</td></tr><tr><th>Ptinidae</th><td>1</td></tr><tr><th>Cleridae</th><td>2</td></tr><tr><th>Melyridae</th><td>3</td></tr><tr><th>Nitidulidae</th><td>10</td></tr><tr><th>Bothrideridae</th><td>1</td></tr><tr><th>Endomychidae</th><td>2</td></tr><tr><th>Coccinellidae</th><td>2</td></tr><tr><th>Melandryidae</th><td>2</td></tr><tr><th>Meloidae</th><td>4</td></tr><tr><th>Oedemeridae</th><td>3</td></tr><tr><th>Tenebrionidae</th><td>5</td></tr><tr><th>Cerambycidae</th><td>26</td></tr><tr><th>Chrysomelidae</th><td>18</td></tr><tr><th>Nemonychidae</th><td>1</td></tr><tr><th>Anthribidae</th><td>3</td></tr><tr><th>Attelabidae</th><td>1</td></tr><tr><th>Curculionidae</th><td>11</td></tr><tr><th>Total</th><td>260</td></tr></tbody></table><p>Table 1 Composition of Coleopterous insect fauna in the vicinity of the Mordovia Nature Reserve ТабΛица 1 Состав фауны жесткокрыΛых насекомых в окрестностях МорÁовского заповеÁника</p>
Adjacency matrices for Carril et al. 'Evolution of avian foot morphology through anatomical network analysis'
<p>The adjacency matrices used in Carril et al. <em>Evolution of avian foot morphology through anatomical network analysis </em>(doi: https://doi.org/10.1038/s41467-024-54297-9)<em>,</em> saved both in an Excel file and as individual .csv files for each matrix. The R script for the Anatomical Network Analysis used in the paper uses the .csv files as raw data, as these are easier to read and process in R. Abbreviations can be found in Supplementary Data 12 of the original paper.</p>
Bacterial and archaeal communities in the Clarion-Clipperton Zone: comparison between adjacent seamount and abyssal plain communities
<p>This dataset contrasts microbial communities from abyssal plain and seamount samples, collected on the DeepCCZ cruise to the western Clarion-Clipperton Zone in May-June 2018. This cruise sampled paired plain and seamount sites in three Areas of Particular Environmental Interest (APEIs). Samples included CTD casts to collect overlying water and sediment cores and polymetallic nodules (only present on the plains in two APEIs) collected using an ROV.</p> <p>Genomic DNA was extracted from these samples; 16S rRNA genes were amplified using primers targeting the V4-V5 hypervariable regions (as recommended by Parada et al. 2016 doi: 10.1111/1462-2920.13023); and sequenced used PE250v2 chemistry on an Illumina MiSeq. Sequences were quality-controlled, clustered into amplicon sequence variants (ASVs) using DADA2 (Callahan et al. 2016 doi: 10.1038/nmeth.3869), and classified using Silva v138 (Quast et al. 2013 doi: 10.1093/nar/gks1219). Differential abundances between comparisons of interest were calculated using DESeq2 on unnormalized datasets following the authors' recommendations (Love et al. 2014 doi: 10.1186/s13059-014-0550-8). Raw sequences are archived with the Sequence Read Archive (https://www.ncbi.nlm.nih.gov/sra) under project code PRJNA660809.</p> <p>Datasets archived here include:</p> <p>1) DeepCCZ_topography_metadata.xlsx: sampling location and other collection metadata, as well as all available environmental data (e.g., inorganic nutrients, total organic carbon, cell abundance counts), for DNA samples archived in this dataset</p> <p>2) DeepCCZ_topography_unnormalized_counts.xlsx: quality-controlled but otherwise unprocessed ASV results, including sequences associated with each ASV</p> <p>3) DeepCCZ_topography_relabund_UniFrac_with3ums.xlsx: quality-controlled ASV results, subsampled to a lower read count that accommodates the lower-yield 3 µm filter size samples; this sheet includes both relative abundances and a weighted UniFrac distance matrix</p> <p>4) DeepCCZ_topography_relabund_UniFrac_no3ums.xlsx: quality-controlled ASV results, subsampled to a higher read count that excludes the lower-yield 3 µm filter size samples; this sheet includes both relative abundances and a weighted UniFrac distance matrix</p> <p>5) DeepCCZ_topography_DESeq_*.xlsx (7 files): a series of results from numerous DESeq2 tests (Love et al. 2014 doi: 10.1186/s13059-014-0550-8) to identify differentially abundant ASVs in different sample categories. Tests were run on non-subsampled counts, as recommended.</p> <p>6) DeepCCZ_topography_diversity_metrics.xlsx: ASV richness, Pielou's evenness, and Shannon diversity for both levels of subsampling</p> <p> </p> <p>Contact for questions about this dataset: Emma Wear, ekwear.oceans@gmail.com</p>
A "Dirty" Footprint: Soil macrofauna biodiversity and fertility in Amazonian Dark Earths and adjacent soils
<p>Amazonian rainforests once thought to hold an innate pristine wilderness, are increasingly known to have been densely inhabited by populations showing a diverse and complex cultural background prior to European arrival. To what extent these societies impacted their landscape is unclear. Amazonian Dark Earths (ADEs) are fertile soils found throughout the Amazon Basin, created by pre-Columbian societies as a result of more sedentary habits. Much is known of the chemistry of these soils, yet their zoology has been neglected. Hence, we characterised soil macroinvertebrate communities and activity in these soils at nine archaeological sites and adjacent reference soils in three Amazonian regions, totaling eighteen sampling sites. Furthermore, we characterized various soil chemical and physical properties associated with soil fertility.</p> <p>The current dataset contains data on soil macroinvertebrate biodiversity (26 taxa), with a special focus on termites, earthworms and ants. It also contains data on soil macromorphology, bulk density and porosity, soil carbon, nitrogen, macro and micronutrients, magnetic susceptibility and apparent electrical conductivity. The results show similar overall macrofauna morphospecies richness in ADE and adjacent soils, but distinct communities in each soil type. They also show higher soil fauna activity in ADEs when compared to adjacent reference soils, associated with greater earthworm populations. Finally, they also confirm the well-known high soil fertility in ADEs compared with adjacent soils. Land use was an important determinant of both macrofauna biodiversity and soil fertility. These findings support the idea that humans have built and sustained a contrasting high fertility ecosystem that persisted until our days, altering biodiversity distribution patterns in Amazonia.</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.