Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
933
datasets available to search
ShareScore release 0.9.0
Dataset results
933 results for “shRNA”
Gene expression profiling of human neuroblastoma cell line BE(2)-C infected with lentiviruses expressing shRNA to GFP (GFPsh) or human PUS7 (PUS7sh#33) for 6 days
GEO Series GSE232058. Homo sapiens. 6 samples. Type: Expression profiling by array.
The Functional Genomic Landscape of Human Breast Cancer Drivers, Vulnerabilities, and Resistance (pooled shRNA screens)
GEO Series GSE74702. Homo sapiens. 621 samples. Type: Genome variation profiling by array.
RNA-seq of H1299 cells in which either PRKCI or SOX2 was silenced by validated lentiviral shRNA constructs
GEO Series GSE141666. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
RNA expression profiles of BLID shRNA vs. control (scramble) shRNA transduced breast cancer cells
GEO Series GSE295735. Homo sapiens. 24 samples. Type: Expression profiling by array.
Gene expression profiling of Hodgkin Lymphoma and Non-Hodgkin Lymphoma cell lines for the NF-kB family of trasncription factors followinf each one depletion by shRNA.
GEO Series GSE109803. Homo sapiens. 12 samples. Type: Expression profiling by array.
Gene expression data of human keratinocytes knocked down for SMC1A, SMC3, or control shRNA.
GEO Series GSE83870. Homo sapiens. 6 samples. Type: Expression profiling by array.
Nuclear miRNA-mediated gene silencing dependent on Argonaute proteins is required for embryonic stem cell differentiation [4_Cnot shRNA-seq]
GEO Series GSE108798. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Inhibition of NOX1 Gene Expression with shRNA in Human Colon Cancer
GEO Series GSE4561. Homo sapiens. 20 samples. Type: Expression profiling by array.
Gene expression profiling of KU812 CD25 shRNA vs KU812 control random shRNA
GEO Series GSE60315. Homo sapiens. 2 samples. Type: Expression profiling by array.
RNA expression in MDA-MB-231 cells transfected with scramble, LSD1 or HDAC5 shRNA (HG-U133A_2)
GEO Series GSE72687. Homo sapiens. 12 samples. Type: Expression profiling by array.
Expression profiling of Burkitt's lymphoma cells 24h after FOXM1 shRNA or MYB shRNA lentivirus-mediated transduction
GEO Series GSE17172. Homo sapiens. 18 samples. Type: Expression profiling by array.
Effect of YAP overexpression on HuCCT1 cholangiocarcinoma cell line transcriptome (shRNA targeting YAP)
GEO Series GSE61765. Homo sapiens. 8 samples. Type: Expression profiling by array.
Gene expression profiles of PIK3CA knockdown by shRNA in lung cancer cells
GEO Series GSE46869. Mus musculus. 6 samples. Type: Expression profiling by array.
Expression changes in Setdb1-knockdown with shRNA in Hepa1-6 cells, a mouse hepatocellular carcinoma line
GEO Series GSE254197. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
shRNA TMEM258 knockdown in HeLa
GEO Series GSE89542. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
Expression data from E12.5 NSP cells, CTL v REST shRNA
GEO Series GSE38538. Mus musculus. 6 samples. Type: Expression profiling by array.
RNA sequencing (RNA-seq) of ANKRD6 in MKN45 gastric cancer cells by shRNA
GEO Series GSE238103. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
ATAC-seq for E14 cells knockdown with siRNA or shRNA
GEO Series GSE167177. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
H9-hESC derived human neural stem cells with combinations of mutant IDH1-R132H overexpression, P53 shRNA knockdown and/or ATRX shRNA knockdown
GEO Series GSE94962. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by genome tiling array; Other.
Comparison of PPIH knockdown in HeLa cells compared to scrambled shRNA control
GEO Series GSE103648. Homo sapiens. 12 samples. Type: Expression profiling by array.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.