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2,063
datasets available to search
ShareScore release 0.9.0
Dataset results
2,063 results for “single cell transcriptomics”
Transcriptomic signatures of the aging brain at single-cell resolution
GEO Series GSE179236. Macaca mulatta. 24 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptomics of Atlantic salmon (Salmo salar L.) liver reveals cellular heterogeneity and immunological responses to challenge by Aeromonas salmonicida
GEO Series GSE207655. Salmo salar. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptomic Profiling of subpopulations of vascular endothelial cells following acute lung injury
GEO Series GSE148499. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Identification of cell types and transcriptome landscapes of PEDV infected porcine small intestine using single-cell RNA-sequencing
GEO Series GSE175411. Sus scrofa. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockad
GEO Series GSE300293. Mus musculus. 19 samples. Type: Other.
Joint single-cell profiling of Cas9 edits and transcriptomes reveals on- and off-target effects on gene expression (Superb-seq)
GEO Series GSE284207. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-nucleus transcriptomic survey of cell diversity and functional maturation in the postnatal mammalian hearts
GEO Series GSE118545. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Single cell dual-omics reveals the transcriptomic and epigenomic diversity of cardiac non-myocytes
GEO Series GSE157446. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
FB5P-seq: FACS-based 5-prime end single-cell RNAseq for integrative analysis of transcriptome and antigen receptor repertoire in B and T cells
GEO Series GSE137275. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Effects of zinc supplementation in the temporal transcriptomic profiling of human primary fetal RPE cell using single-cell RNA sequencing
GEO Series GSE209758. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Single-cell Transcriptome Analysis Revealed that EGFR Mutation Leads to a Suppressive Tumor Immune Microenvironment in Lung Adenocarcinoma
GEO Series GSE171145. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
A single cell view of the transcriptome during lateral root initiation
GEO Series GSE158761. Arabidopsis thaliana. 7 samples. Type: Expression profiling by high throughput sequencing.
A single cell transcriptome atlas of the developing zebrafish hindbrain [fgfr1]
GEO Series GSE141426. Danio rerio. 8 samples. Type: Expression profiling by high throughput sequencing.
Spatial single-cell transcriptomics of MASLD-affected liver biopsy samples.
GEO Series GSE292268. Homo sapiens. 2 samples. Type: Other.
Transcriptomic analysis of EBV LMP1 TES domain(s) single or double mutant and CD40L treatment in EBV-negative BL41 Burkitt-Lymphoma Cells
GEO Series GSE228158. Homo sapiens. 21 samples. Type: Expression profiling by high throughput sequencing.
Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas [Spatial Transcriptomics]
GEO Series GSE300146. Homo sapiens. 56 samples. Type: Other.
Co-profiling of in situ RNA-protein interactions and transcriptome in single cells and tissues [FRISCR_MAPIT-seq]
GEO Series GSE278261. Homo sapiens. 78 samples. Type: Other.
Transcriptomic profile of single-cell sorted monocytes, T cells and CD3+CD14+ cells from one subject infected with latent tuberculosis
GEO Series GSE117435. Homo sapiens. 85 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis of rice root tips [scRNA-seq]
GEO Series GSE146034. Oryza sativa. 2 samples. Type: Expression profiling by high throughput sequencing.
Dynamics of phage-host interactions in Bacteroides fragilis resolved by single-cell transcriptomics [scRNA-Seq data]
GEO Series GSE309504. Bacteroides fragilis. 3 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.