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FIGURE 4 in Polyphasic characterization of Trichocoleus desertorum sp. nov. (Pseudanabaenales, Cyanobacteria) from desert soils and phylogenetic placement of the genus Trichocoleus
FIGURE 4. Detail of the Trichocoleus cluster based on Bayesian analysis with 16S rRNA gene sequence data. Posterior probabilities/ bootstrap support from parsimony analysis reported above node. op. = operon. Holotype is based on strain in bold font.
FIGURE 3 in Polyphasic characterization of Trichocoleus desertorum sp. nov. (Pseudanabaenales, Cyanobacteria) from desert soils and phylogenetic placement of the genus Trichocoleus
FIGURE 3. Phylogenetic position of the genus Trichocoleus within the Pseudanabaenales based on Bayesian analysis with 16S rRNA gene sequence data. Posterior probabilities/bootstrap support from parsimony analysis reported above node. Taxa in quotation marks are outside of correct genus clade but reflect unrevised names given in GenBank.
FIGURE 1 in Polyphasic characterization of Trichocoleus desertorum sp. nov. (Pseudanabaenales, Cyanobacteria) from desert soils and phylogenetic placement of the genus Trichocoleus
FIGURE 1. Morphological variability of the type population of T. desertorum (ATA4-8). A. Multiple trichomes in a sheath. B. Short trichome with conical apical cells. C. Different shapes of apical cells and tapering of trichome. D. Granules in cells (arrows). E–F. Variable cell lengths and sheath properties. G. Short trichomes with pointed apical cells and vivid cyan spots in cells, senescent culture. H. Necridium (arrow). I. Cyan spots in young trichome. Scale = 10 µm (A at lower magnification, B–I share the scale bar from B).
FIGURE 9. V3 helix. A. Trichocoleus desertorum ATA2-1 in Polyphasic characterization of Trichocoleus desertorum sp. nov. (Pseudanabaenales, Cyanobacteria) from desert soils and phylogenetic placement of the genus Trichocoleus
FIGURE 9. V3 helix. A. Trichocoleus desertorum ATA2-1-CV2/CV7. B. Trichocoleus desertorum ATA3-4Q-KO9, Trichocoleus sp. TAA2- 1HA2.30. C. Trichocoleus badius op. 1 and 2. D. Trichocoleus desertorum CMT-1FDIN-NPC12A. E. Trichocoleus desertorum CMT-1BRIN- NPC4B, WJT8-NPBG3, WJT40-NPBG1/NPBG2, WJT46-NPBG1 op. 1. F. Trichocoleus desertorum ATA14-3-RM35/RM36 op. 1, JO2-1B. G. Trichocoleus desertorum ATA1-4-KO5/CV13, ATA4-8-CV2/CV3/CV12. H. Trichocoleus desertorum ATA14-3-RM36 op. 2. I. Trichocoleus desertorum ATA12-5-KO5. J. Trichocoleus desertorum WJT55-NPBG8. K. Trichocoleus desertorum FB1-1A. L. Trichocoleus desertorum WJT16-NPBG1. M. Trichocoleus desertorum WJT46-NPBG1 op. 2. N. Nodosilinea nodulosa.
FIGURE 5 in Polyphasic characterization of Trichocoleus desertorum sp. nov. (Pseudanabaenales, Cyanobacteria) from desert soils and phylogenetic placement of the genus Trichocoleus
FIGURE 5. Phylogenetic relationships among Trichocoleus strains based on parsimony analysis with 16S–23S ITS region sequence. Values above branches represent bootstrap values from this analysis. Holotype is based on strain in bold font. Letters in parentheses represent ITS helices shown in Figs. 6–9 in order: D1–D1'/Box-B/V2/V3. Helix pattern for operons not included in the ITS tree are shown in lower right corner.
FIGURE 2 in Polyphasic characterization of Trichocoleus desertorum sp. nov. (Pseudanabaenales, Cyanobacteria) from desert soils and phylogenetic placement of the genus Trichocoleus
FIGURE 2. Morphological variability of various T. desertorum populations. A. Multiple trichomes in a common sheath (ATA3-4Q-KO9). B. Short trichome with short, strongly constricted cells (ATA1-4-KO5). C. Asymmetrical cell division (WJT40-NPBG1). D–E. Asymmetrical cell division and granules (arrows) in cells (CMT-1BRIN-NPC4B). F. Multiple trichomes in a colorless lamellated sheath with greyish light refraction (ATA14-3-RM36). G–H. Thylakoids in fascicles (arrows) (G. ATA14-3-RM36, H. ATA2-1-CV2). I–J. Involution cells (arrow) (I. WJT40-NPBG1, J. WJT55-NPBG8). K. Tapering trichome with pointed apical cell (ATA1-4-CV13). Scale = 10 µm.
FIGURE 8. V2 helix. A. Trichocoleus desertorum ATA14-3 in Polyphasic characterization of Trichocoleus desertorum sp. nov. (Pseudanabaenales, Cyanobacteria) from desert soils and phylogenetic placement of the genus Trichocoleus
FIGURE 8. V2 helix. A. Trichocoleus desertorum ATA14-3-RM35/RM36 op. 1 and 2. B. Trichocoleus desertorum ATA1-4-KO5/CV13, ATA3-4Q-KO9, ATA4-8-CV2/CV3/CV12, ATA12-5-KO5. C. Trichocoleus desertorum WJT8-NPBG3, WJT40-NPBG1/NPBG2, WJT46- NPBG1 op. 1, CMT-1BRIN-NPC4B. D. Trichocoleus desertorum WJT55-NPBG8. E. Trichocoleus badius op. 2. F. Trichocoleus badius op. 1. G. Trichocoleus sp. TAA2-1HA2.30. H. Trichocoleus desertorum ATA2-1-CV2/CV7. I. Leptolyngbya Zehnder 1965/U140.
FIGURE 6. Pseudoepicoccum cocos. a in Phylogenetic placement of Bahusandhika, Cancellidium and Pseudoepicoccum (asexual Ascomycota)
FIGURE 6. Pseudoepicoccum cocos. a. Colonies on leaf spots. b. Culture on MEA. c. Sporodochia. d. Conidia.
FIGURE 5. Cancellidium applanatum. a in Phylogenetic placement of Bahusandhika, Cancellidium and Pseudoepicoccum (asexual Ascomycota)
FIGURE 5. Cancellidium applanatum. a. Colony on host. b. Culture on MEA. c–e Conidia. f. Chains of monilioid cells.
FIGURE 4. Bahusandhika indica. a in Phylogenetic placement of Bahusandhika, Cancellidium and Pseudoepicoccum (asexual Ascomycota)
FIGURE 4. Bahusandhika indica. a. Colony on host. b. Culture on MEA. c–d. Conidial chains with conidiogenous cells.
FIGURE 3 in Phylogenetic placement of Bahusandhika, Cancellidium and Pseudoepicoccum (asexual Ascomycota)
FIGURE 3. Maximum likelihood tree of Pseudoepicoccum cocos and related taxa based on combined analysis of ITS and LSU sequences. Species described in this study is in bold.
FIGURE 2 in Phylogenetic placement of Bahusandhika, Cancellidium and Pseudoepicoccum (asexual Ascomycota)
FIGURE 2. Maximum likelihood tree of Cancellidium applanatum and related taxa based on combined analysis of ITS and LSU sequences. Species described in this study is in bold.
FIGURE 1 in Phylogenetic placement of Bahusandhika, Cancellidium and Pseudoepicoccum (asexual Ascomycota)
FIGURE 1. Maximum likelihood tree of Bahusandhika indica and related taxa based on combined analysis of ITS and LSU sequences. Species described in this study is in bold.
FIGURE 1 in On the disintegration of Molluginaceae: a new genus and family (Kewa, Kewaceae) segregated from Hypertelis, and placement of Macarthuria in Macarthuriaceae
FIGURE 1. Phylogenic position of Molluginaceae genera (including Hypertelis, Kewa and Macarthuria) among Caryophyllales. The topology was obtained through Bayesian inference of coding sequences from the plastid markers rbcL, matK and trnK (adapted from Christin et al. 2011).
FIGURE 3 in A multiple gene genealogy reveals phylogenetic placement of Rhopalostroma lekae
FIGURE 3. Rhopalostroma lekae in OA after 2 weeks (MFLUCC 13-0123). A: Averse showing melanized pigments and central mycelia. B: Reverse side of culture. C: Development of stromatal primordia in the culture. D: Melanized mycelia at the centre. E–G: Conidiophores from simple to more complex structure. H–J: Development of conidia and conidiogenesis cells. K: Conidia. Bars: c–d 1mm; e–k 50 µm.
FIGURE 2 in A multiple gene genealogy reveals phylogenetic placement of Rhopalostroma lekae
FIGURE 2. Rhopalostroma lekae (MFLU 13-0440). A: Habit on bark. B: Separated mature stromata. C: Stromata with dark purplish pigments in head part. D: Longitudinal section of stroma showing perithecial alignment in the periphery of stroma. E: Cross section of the stroma (head) showing perithecia. F and G: Mature ascus in water. H: Ascus in Melzer's reagent, Note the lack of an apical apparatus. I: KOH extractable pigments of stroma (left-head, right–stipe). J–l: Mature ascospores in water. Bars: a–b 5 mm; c–d 1 mm; e 2 mm; f–l 10 µm.
FIGURE 20. Mimetus uncatus n in New species of the pirate spider genus Mimetus Hentz, 1832 from China with a cladistic hypothesis on their phylogenetic placement (Araneae, Mimetidae)
FIGURE 20. Mimetus uncatus n. sp., male holotype. A, habitus, dorsal view; B, ditto, lateral view; C, cephalothorax, frontal view; D, left palp, prolateral view; E, ditto, ventral view; F, ditto, frontolateral view; G, ditto, retrolateral view; H, left legs I and II, retrolateral view; I, left legs III and IV, retrolateral view; J, femur of left leg I, retrolateral view. Scale bars: A, B, I, 0.5mm; C, J, 0.2mm; D–G, 0.1mm; H, 1mm.
FIGURE 18. Mimetus niveosignatus n in New species of the pirate spider genus Mimetus Hentz, 1832 from China with a cladistic hypothesis on their phylogenetic placement (Araneae, Mimetidae)
FIGURE 18. Mimetus niveosignatus n. sp., male holotype. A, left palp, prolateral view; B, ditto, frontolateral view; C, ditto, ventral view; D, ditto, retrolateral view. Abbreviations: CA = cymbial apex, Cy = cymbium, E = embolus, MCO = membranous conductor, PC = paracymbium, PCP = pilose cuticular projections, SCO = sclerotized conductor, ST = subtegulum, STA = subtegular apophysis, T = tegulum. Scale bars: A–C, 0.05mm; D, 0.1mm.
FIGURE 19. Mimetus niveosignatus n in New species of the pirate spider genus Mimetus Hentz, 1832 from China with a cladistic hypothesis on their phylogenetic placement (Araneae, Mimetidae)
FIGURE 19. Mimetus niveosignatus n. sp., female paratype and chelicera of male holotype. A, epigynum, ventral view; B, ditto, dorsal view; C, right chelicera of male holotype, retrolateral view; D, ditto, prolateral view; E, chelicera of female paratype, prolateral view; F, ditto, retrolateral view. Abbreviations: A = atrium, BP = basal plate, Sp = spermathecae. Scale bars: A–F, 0.05mm.
FIGURE 17. Mimetus niveosignatus n in New species of the pirate spider genus Mimetus Hentz, 1832 from China with a cladistic hypothesis on their phylogenetic placement (Araneae, Mimetidae)
FIGURE 17. Mimetus niveosignatus n. sp., female paratype. A, habitus, dorsal view; B, ditto, lateral view; C, cephalothorax, frontal view; D, epigynum, ventral view; E, ditto, dorsal view; F, left legs I and II, retrolateral view; G, left legs III and IV, retrolateral view; H, femur of left leg I, retrolateral view. Scale bars: A, B, F, G, 0.5mm; C, 0.2mm; D, E, 0.05mm; H, 0.1mm.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.