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Figure 4. A–E in Anatomy and phylogenetic value of the mandibular and coronoid canals and their associated foramina in proboscideans (Mammalia)
Figure 4. A–E, sagittal computed tomography (CT) slices of a mandible of Elephas maximus (TMM M-6445) illustrating the position and path of the mandibular canal and its associated foramina. F, diagrammatic representation of the right hemimandible in occlusal view, showing the position of the serial CT slices shown in A–E. Abbreviations: a.m2, second molar alveolus; a.m.c., anterior mental canal; a.m.f., anterior mental foramen; a.r.m1, anterior root of m1; co.f., coronoid foramen; con., condyle; co.p., coronoid process; l.m.c., lateral mental canal; ma.c., mandibular canal; m.fo., mandibular foramen; m1, first lower molar; p.m.f., posterior mental foramen; sym., symphysis.
Figure 1 in Anatomy and phylogenetic value of the mandibular and coronoid canals and their associated foramina in proboscideans (Mammalia)
Figure 1. Schematic representation of the mandible of the basal proboscidean Phosphatherium escuillei depicting the principal anatomical characters of the coronoid and mandibular canals and their associated foramina in proboscideans (modified from Gheerbrant et al., 2005b). A, labial view; B, lingual view. The courses of the mandibular and coronoid canals in P. escuillei are hypothetical and were reconstructed based on the position of the external foramina and by comparison with Moeritherium. Abbreviations: a.m.c., anterior mental canal; a.m.f., anterior mental foramen; con., condyle; co.f., coronoid foramen; co.p., coronoid process; l.m.c., lateral mental canal; ma.c., mandibular canal; ma.f., mandibular foramen; p.m.f., posterior mental foramen; sym., symphysis (section). Arrow indicates the position of the posterior border of the symphysis. Scale bar = 1 cm.
Figure 2. A–G in Anatomy and phylogenetic value of the mandibular and coronoid canals and their associated foramina in proboscideans (Mammalia)
Figure 2. A–G, transversal (coronal) computed tomography (CT) slices of a mandible of Elephas maximus (TMM M-6445) showing the position and path of the mandibular canal and its associated foramina. H, diagrammatic representation of the mandible in occlusal view, illustrating the position of the CT slices depicted in A–G. Abbreviations: a.m2, second molar alveolus; a.m.c., anterior mental canal; a.m.f., anterior mental foramen; co.f., coronoid foramen; co.p., coronoid process; l.m.c., lateral mental canal; m1, first lower molar; ma.c., mandibular canal; p.c., pulpar chamber of m1; p.m.f., posterior mental foramen.
Figure 7 in Anatomy and phylogenetic value of the mandibular and coronoid canals and their associated foramina in proboscideans (Mammalia)
Figure 7. Mandibular rami in medial view illustrating the shape and position of the mandibular foramen amongst various proboscidean taxa. A, Prodeinotherium bavaricum (BSP 1977 I 229; from Huttunen & Göhlich, 2002); B, Phiomia serridens (NHM M9122); C, Mammut americanum (NHM M17187); D, 'Stegomastodon' platensis (MNHN PAM187); E, Loxodonta africana (MZF); F, Elephas maximus (MZF 8065); G, Mammuthus primigenius (IAM 6). Abbreviations: a.m3, alveolus of m3; con., condyle; co.f., coronoid foramen; co.p., coronoid process; l.pr., linguoid process; ma.f., mandibular foramen; m2, second lower molar; m3, third lower molar.
Figure 10 in Anatomy and phylogenetic value of the mandibular and coronoid canals and their associated foramina in proboscideans (Mammalia)
Figure 10. Character mapping analysis of ten mandibular characters on a cladogram of main proboscidean taxa. The original tree by Tassy (1996) was modified (see text for details). Taxa absent from our analysis are shaded. Character changes are displayed by bar with character number over the bar, and evolutionary change below. The changes of the homoplastic character (character 2) are displayed by unfilled bars.
Figure 6 in Anatomy and phylogenetic value of the mandibular and coronoid canals and their associated foramina in proboscideans (Mammalia)
Figure 6. Outline of the path of the mandibular canal in A, Mammut americanum (Mammutidae) and B, Mammuthus primigenius (Elephantidae). The American mastodon exemplifies the primitive condition for elephantoids, with the mandibular canal running labially to the tooth row. In mammoths the mandibular canal is most frequently found lingual to the teeth. Abbreviations: a.m.f., anterior mental foramen; ma.c., mandibular canal; p.m.f., posterior mental canal.
Predicted HHV values for woody biomass samples from USDA-AFRI project using the best performing models.
<p>Predicted HHV values for samples from the USDA-AFRI project using the best-performing models from the cross-validation process.</p>
An efficient method for higher heating value estimation of municipal solid wastes electronic supplementary material
<p><span><span>To facilitate the disposal of municipal solid wastes (MSWs) via thermo-chemical approaches, the accurate measurement of MSWs' higher heating value (HHV) plays a key role. This study aims to forecast the HHV of MSWs using the optimized multi-variate grey model (OBGM (1, N)) due to its high accuracy under the condition of scanty data. Results show that POBGM (1, 5) with proximate analysis data is the most accurate model with the least error of 5.41% MAPE (mean absolute percentage error). This model also illustrates that ash is the most important factor affecting HHV due to its significant fraction in MSWs, followed by volatiles, fixed carbon and water contents, respectively. With prediction interval (PI) method, most of the actual data can be included by using the 95% confidence intervals.</span></span></p>
Dataset for analysis of the value of energy for wave, wind and solar power
<p>Data and code for: Vrana, Til Kristian, & Svendsen, Harald G. (2021). Quantifying the Market Value of Wave Power compared to Wind&Solar - a case study. The 9th Renewable Power Generation Conference - RPG Dublin Online 2021 (RPG 2021), (https://doi.org/10.1049/icp.2021.1383)</p>
FIGURE. Phylogenetic tree based on RAxML analyses of a combined LSU, ITS and SSU dataset. Bootstrap support values for ML and MP equal to or greater than 75% and PP value greater than 0.95 are in thickened. Ex-type isolates are in bold, and new taxa are indicated in red. The tree is rooted with Atractospora aquatica (S-1297) and A. aquatica (MFLU 18–2322). in Conlarium sichuanense sp. nov., on Ficus virens from Sichuan Province, China
FIGURE. Phylogenetic tree based on RAxML analyses of a combined LSU, ITS and SSU dataset. Bootstrap support values for ML and MP equal to or greater than 75% and PP value greater than 0.95 are in thickened. Ex-type isolates are in bold, and new taxa are indicated in red. The tree is rooted with Atractospora aquatica (S-1297) and A. aquatica (MFLU 18–2322).
FIGURE. Maximum likelihood phylogram of Multiclavula spp. based on ITS sequences. Rooted to Clavulina cristata. Bar = estimated changes/nucleotide. Support values above or below branches: Bayesian posterior probability/maximum likelihood bootstrap. in New and interesting species of Agaricomycetes from Panama
FIGURE. Maximum likelihood phylogram of Multiclavula spp. based on ITS sequences. Rooted to Clavulina cristata. Bar = estimated changes/nucleotide. Support values above or below branches: Bayesian posterior probability/maximum likelihood bootstrap.
FIGURE. Maximum likelihood phylogram of Humidicutis spp. based on ITS sequences. Rooted to Humidicutis marginata. Bar = estimated changes/nucleotide. Support values above or below branches: Bayesian posterior probability/maximum likelihood bootstrap. in New and interesting species of Agaricomycetes from Panama
FIGURE. Maximum likelihood phylogram of Humidicutis spp. based on ITS sequences. Rooted to Humidicutis marginata. Bar = estimated changes/nucleotide. Support values above or below branches: Bayesian posterior probability/maximum likelihood bootstrap.
FIGURE. Bayesian MCMC phylogram of Gliophorus spp. based on ITS sequences. Rooted to Hygrophorus pudorinus. Bar = estimated changes/nucleotide. Support values above or below branches: Bayesian posterior probability/maximum likelihood bootstrap. in New and interesting species of Agaricomycetes from Panama
FIGURE. Bayesian MCMC phylogram of Gliophorus spp. based on ITS sequences. Rooted to Hygrophorus pudorinus. Bar = estimated changes/nucleotide. Support values above or below branches: Bayesian posterior probability/maximum likelihood bootstrap.
The Dataset of the PhD thesis titled "Operationalizing Values in Mobile Applications: A Mixed-Methods Empirical Study on Agriculture Apps for Bangladeshi Female Farmers"
<p>This package includes the survey (PVQ) questionnaire, demographic questions, focus groups questionnaire, interview questionnaire, and member checking summary used in this thesis.</p>
◂Fig. 2 Maximum likelihood trees. A Tree obtained when analysing 18S data set. B Tree obtained when analysing 28S data set. C Tree obtained when analysing COI data set. D Tree obtained when analysing 16S data set. Bootstrap support values below nodes. Syllis and Typosyllis species as they were originally described in Ramisyllis kingghidorahi n. sp., a new branching annelid from Japan
◂Fig. 2 Maximum likelihood trees. A Tree obtained when analysing 18S data set. B Tree obtained when analysing 28S data set. C Tree obtained when analysing COI data set. D Tree obtained when analysing 16S data set. Bootstrap support values below nodes. Syllis and Typosyllis species as they were originally described
FIGURE. Phylogenetic tree of specimens on Poaceae and related host plants constructed by MP method based on ITS+28S regions of rDNA. Bootstrap values of MP and ML are followed by the Bayesian posterior probabilities (Bpp) on the nodes in the topology. Asterisk (*) represents bootstrap values or Bpp less than 50% in the topology. Sample data are shown with voucher specimen number or GenBank accession number, and host plant. Sequence data determined in this study are shown in color. Teliospore shapes are shown in each clade detected, and new species are shown by asterisk (*) on clades. 0, I: Spermogonial and aecial host genus. Asterisk (*) on host plants: Spermogonial and aecial host plants. in Phylogenetic approach for identification and life cycles of Puccinia (Pucciniaceae) species on Poaceae from northeastern China
FIGURE. Phylogenetic tree of specimens on Poaceae and related host plants constructed by MP method based on ITS+28S regions of rDNA. Bootstrap values of MP and ML are followed by the Bayesian posterior probabilities (Bpp) on the nodes in the topology. Asterisk (*) represents bootstrap values or Bpp less than 50% in the topology. Sample data are shown with voucher specimen number or GenBank accession number, and host plant. Sequence data determined in this study are shown in color. Teliospore shapes are shown in each clade detected, and new species are shown by asterisk (*) on clades. 0, I: Spermogonial and aecial host genus. Asterisk (*) on host plants: Spermogonial and aecial host plants.
Restoration priorities for Caatinga dry forests: landscape resilience, connectivity and biodiversity value
<p>1. Restoration actions can halt biodiversity loss and rescue its services. However, in order to be effective, priority areas for restoration should be chosen based on objective large-scale restoration planning. Here, a multi-criteria graph theory (GT) framework is proposed to indicate priority areas for active restoration, based on landscape resilience, landscape connectivity, and biodiversity conservation value, focusing on threatened endemic plant species.</p> <p>2. We applied this GT framework to 10,406 catchment basins of the Brazilian Caatinga, the largest seasonally dry tropical forest of the New World. Vegetation cover and within-catchment connectivity were used to identify catchments of intermediate landscape resilience, which in principle offer more effective opportunities for restoration. Then, such catchments were independently classified into (i) three classes according their value for between-catchment connectivity and (ii) three classes of biodiversity conservation value, based on richness of threatened, endemic plant species. By the integration of landscape resilience, landscape connectivity and biodiversity conservation values, three priority classes for restoration were generated.</p> <p>3. The multi-criteria framework generated several restoration priority cut-offs. Prioritization based on landscape resilience selected 36% of the Caatinga catchments as high priority for restoration. By independently adding landscape connectivity and biodiversity conservation value, only 12% and 3% of the catchments, respectively, were considered high priority. By combining all three criteria, 9% of the catchments were selected as high priority and less than 1% as top priority for restoration.</p> <p>4. Synthesis and applications: The multicriteria GT framework for restoration prioritization, which maximizes the effectiveness of restoration actions, landscape connectivity for climate change adaptation and conservation of threatened species, can be applied worldwide under different budged limitations and spatial scales, being useful for private, state, and federal initiatives.</p>
FIGURE. Phylogenetic analysis of Chrysosporium spp. based on ITS sequences. Statistical support values (≥50 %) are shown at nodes, and presented as ML bootstrap support/Bayesian posterior probabilities. Names in black bold are the strains isolated in this study, the coloured names are the new species. in Morphological and phylogenetic characterisations reveal nine new species of Chrysosporium (Onygenaceae, Onygenales) in China
FIGURE. Phylogenetic analysis of Chrysosporium spp. based on ITS sequences. Statistical support values (≥50 %) are shown at nodes, and presented as ML bootstrap support/Bayesian posterior probabilities. Names in black bold are the strains isolated in this study, the coloured names are the new species.
The dataset of the paper titled "Investigating End-Users' Values for Agriculture Mobile Applications Development: A Mixed-Methods Empirical Study on Bangladeshi Female Farmers"
<p>This package includes a survey questionnaire, demographic questions, focus groups questionnaire, interview questionnaire, and 10 main values with corresponding attributes and the referred names used in this paper submitted to IST.</p>
The dataset of the paper titled "Investigating End-Users' Values in Agriculture Mobile Applications Development: An Empirical Study on Bangladeshi Female Farmers"
<p>This package includes a survey questionnaire, demographic questions, and 10 main values with corresponding attributes and the referred names used in this paper submitted to JSS.</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.