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CloudButton Serverless Benchmarks results (June 2022)
<p>Results of the <strong>CloudButton Serverless Benchmark</strong>. It includes plots with results of the <strong>Flops benchmark</strong> and the <strong>Storage benchmark</strong>. The first one evaluates compute power and scalability of cloud providers by running multiple compute intensive tasks concurrently. The second one evaluates the throughput of read and write operations to the object storage services of different cloud providers by running such operations in many tasks and concurrently.</p> <p>The benchmark has been run on 6 FaaS services (IBM Cloud Functions, AWS Lambda, Microsoft Azure Functions, Google Cloud Functions, Google Cloud Run, and Alibaba Aliyun Function Compute) and 5 Object Storage services (IBM Cloud Object Storage, AWS S3, Microsoft Azure Blob, Google Storage, Alibaba Aliyun Object Storage Service).</p>
Simulation results for ProSSE and datafile for case study
<p>This repository includes the data files for the simulation study and the case study in the publication.</p> <p>The simulation_result.Rdata is an R data file that stores simulated data and results. The data is used to generate Figures 2-7, S1, and S2.</p> <p>The casestudy_trees.Rdata is an R data file that stores the posterior samples of the species tree of the Australian rainbow skinks and the model fitting on these trees. The data file is used to generate Figure 8.</p>
Waveforms and results of seismic attenuation in Sumatra subduction zone, Indonesia
<p>Datasets for the manuscript:</p> <p>Styawan, Y., Kuo, C.-H., Huang, B.-S., Wen, K.-L., Haridhi, H. A., Sianipar, D., Characteristics of seismic attenuation in Sumatra subduction zone, Indonesia (submitted)</p> <p>The attached files include:</p> <p>1) 0.2 Hz Highpass filtered waveforms for Z and T components.</p> <p>2) Results (α, event, station, t*, Q, corner frequency, Ω0, SNR, component (Z or T), category (forearc, mountain, or backarc), and Qp/Qs).</p> <p>3) Additional data (information on events and stations).</p> <p>4) site amplification factors (P and S of all stations in different α).</p>
Results of ultrasound measurements of sea-ice cores sampled during the Southern oCean seAsonal Experiment (SCALE) winter cruise in 2019
<p>This dataset details the results of testing sea ice cores collected during the SCALE 2019 Winter Cruise using ultrasound techniques. </p>
Results of SPOT surveys for tourists, residents and entrepreneurs in the case studies - dataset
<p>This is a dataset of three surveys conducted within the scope of the SPOT project. The purpose of this dataset is to provide the results of the surveys for tourists, residents and entrepreneurs of the fifteen participating case studies. </p>
Data and morphometric results from a physical experiment simulating washover deposition
<p>This portfolio includes two sets of data, used and explained in Lazarus, Williams & Goldstein (preprint: <a href="https://doi.org/10.31223/X5JH1X">https://doi.org/10.31223/X5JH1X</a>):</p> <ol> <li>washover morphometry measured from a physical experiment to simulate washover deposition, conducted at the Total Environment Simulator (TES) at the University of Hull ('TES_washover_morphometry.csv');</li> <li>the terrestrial laser-scan data in which those morphometric characteristics of washover were measured ('Run01.zip' – 'Run22.zip'), with a table of experimental conditions for each trial (run).</li> </ol> <p> </p> <p><strong>Washover morphometry dataset</strong></p> <p><em><strong>TES_washover_morphometry.csv</strong></em> – Washover morphometry from the 22 experimental trials in the TES at Hull. Dataset includes: deposit ID, throat width (m), deposit width (m), intrusion length (m), deposit area (m<sup>2</sup>), deposit volume (m<sup>3</sup>), deposit perimeter (m), built fraction, forcing mode ("inundation" or "wave-driven"), and a dataset label ("TES").</p> <p> </p> <p><strong>Table of experimental conditions</strong></p> <p><em><strong>TES_parameters_trial_log_full_v2.pdf</strong></em> – Table of experimental conditions for each trial (run).</p> <p> </p> <p><strong>Data folders</strong></p> <p>These folders contain terrestrial laser-scan data from washover experiments at the Total Environment Simulator (TES) at the University of Hull. These files were used to identify and measure the individual washover deposits in each experimental trial.</p> <p>Each folder (Run01–Run22) contains data (in 'e57' file format) for a specific trial, and includes the following:</p> <p><em><strong>RunX_DOD.e57</strong></em> – This is a point cloud of the difference between the Pre_Processed and Post_Processed files. This is produced by subtracting the 'post' values from the 'pre' values.</p> <p><em><strong>RunX_Post_Processed.e57</strong></em> – This is a point cloud of the topography at the end of the experimental run, created from the raw data file by trimming out extraneous points.</p> <p><em><strong>RunX_Post_Raw.e57</strong></em> – This is a point cloud of the topography at the end of the experimental run, created in FARO Scene to merge two individual point clouds (covering the entire interior of the TES) into a non-proprietary file format.</p> <p><em><strong>RunX_Pre_Processed.e57</strong></em> – This is a point cloud of the topography prior to the experimental run, created from the raw data file by trimming out extraneous points.</p> <p><em><strong>RunX_Pre_Raw.e57</strong></em> – This is a point cloud of the topography prior to the experimental run, created in FARO Scene to merge two individual point clouds (covering the entire interior of the TES) into a non-proprietary file format.</p>
Results of Investigation of a Molecular Plasma From Its Acoustic Response
<p>Result data set of the publication "Investigation of a Molecular Plasma From Its Acoustic Response"</p>
Segmentation models and experimental results on segmenting slide scans of diatom preparations from river Menne
<p>This archive contains the models and the results of the deep learning experiments published in Kloster et al. 2022: Improving deep learning-based segmentation of diatoms in gigapixel-sized virtual slides by object-based tile positioning and object integrity constraint.</p> <p>The folders contain models and results of each of the 24 training runs, the files “metrics.experiments.pt[prediction score threshold].csv contain segmentation score thresholds the models obtained on unknown evaluation data.</p> <p>The data pertaining to each model is stored in a separate folder. Its name follows the convention “experiment.[model architecture].[tiling method].[dataset size].[timestamp]”. Please note that the naming of the tiling method differs from the manuscript; “fixed” refers to fixed-stride tiling, “objectcentred” object-based positioning, and “objectcentred_with_cropped” to object-based positioning + object integrity constraint. Dataset size “10p” refers to a 10% subsample of the complete training data set, “25p” to a 25% subsample and so on.</p> <p>Each folder contains the best performing model of the corresponding training run as pth (Mask R-CNN, PyTorch) or h5 (U-Net, Tensorflow/Keras) file, along with a files describing setup and conduction of the training. Subfolders “test_images_segmented*” contain the segmentation predicted by the models on the evaluation data. These are supplied as 1.) mask image either with the intensity value representing the prediction score (score 0.0 – 1.0 = intensities 0 – 255) or thresholded by the prediction score threshold given in the folder name; 2.) input image overlayed with ground truth (red) and segmentation mask (green), resulting in TP marked in yellow; 3.) a CSV file giving info on the filenames and the segmentation performance metrics.</p> <p>Please refer to the manuscript for further details.</p>
Dataset for "Imaging of Small-Scale Heterogeneity and Absorption Using Adjoint Envelope Tomography: Results from Laboratory Experiments"
<p>The codes for Monte-Carlo simulation, scripts used to calculate the misfit kernels, and the processed data of the laboratory experiment.</p>
Variability due to climate and chemistry in observations of oxygenated Earth-analogue exoplanets: Simulations and results
<p>The Great Oxidation Event was a period during which Earth's atmospheric oxygen (O<sub>2</sub>) concentrations increased from ~10<sup>−5</sup> times its present atmospheric level (PAL) to near modern levels, marking the start of the Proterozoic geological eon 2.4 billion years ago. Using WACCM6, an Earth System Model, we simulate the atmosphere of Earth-analogue exoplanets with O<sub>2</sub> mixing ratios between 0.1% and 150% PAL. Using these simulations, we calculate the reflection/emission spectra over multiple orbits using the Planetary Spectrum Generator. We highlight how observer angle, albedo, chemistry, and clouds affect the simulated observations. We show that inter-annual climate variations, as well as short-term variations due to clouds, can be observed in our simulated atmospheres with a telescope concept such as LUVOIR or HabEx. Annual variability and seasonal variability can change the planet's reflected flux (including the reflected flux of key spectral features such as O<sub>2</sub> and H<sub>2</sub>O) by up to factors of 5 and 20, respectively, for the same planetary phase. This variability is best observed with a high-throughput coronagraph. For example, HabEx (4 m) with a starshade performs up to a factor of two times better than a LUVOIR B (6 m) style telescope. The variability and signal-to-noise ratio of some spectral features depends non-linearly on atmospheric O<sub>2</sub> concentration. This is caused by temperature and chemical column depth variations, as well as generally increased liquid and ice cloud content for atmospheres with O<sub>2</sub> concentrations of <1% PAL.</p>
Text-fig. 4. Charred grass from diatomite of Saint-Bauzile. a: Overview of diatomite slab with one larger specimen of charred grass (left) and several smaller, lath-shaped charcoal fragments; SM.B 22260; scale bar = 1 cm. b: Detail of vein exhibited on split grass blade, with stomata oriented parallel to vein. c: Stomata oriented in rows and bands parallel to veins exposed on split grass blade. d: Surface of grass leaf with rectangular, elongated cells with strongly undulating margins in an intercostal area. in Evidence For Wildfires During Deposition Of The Late Miocene Diatomites Of The Konservat-Lagerstätte Lake Saint-Bauzile (Ardèche, France) - Preliminary Results
Text-fig. 4. Charred grass from diatomite of Saint-Bauzile. a: Overview of diatomite slab with one larger specimen of charred grass (left) and several smaller, lath-shaped charcoal fragments; SM.B 22260; scale bar = 1 cm. b: Detail of vein exhibited on split grass blade, with stomata oriented parallel to vein. c: Stomata oriented in rows and bands parallel to veins exposed on split grass blade. d: Surface of grass leaf with rectangular, elongated cells with strongly undulating margins in an intercostal area.
Text-fig. 2. Charred fern from diatomite of Saint-Bauzile. a: Overview of diatomite slab with large fragment of charred fern; SM.B 22258; scale bar = 1 cm. b: SEM overview image of charred fern pinnule. c: Enlargement of (b) showing details of undulating anticlinal walls of the epidermis. in Evidence For Wildfires During Deposition Of The Late Miocene Diatomites Of The Konservat-Lagerstätte Lake Saint-Bauzile (Ardèche, France) - Preliminary Results
Text-fig. 2. Charred fern from diatomite of Saint-Bauzile. a: Overview of diatomite slab with large fragment of charred fern; SM.B 22258; scale bar = 1 cm. b: SEM overview image of charred fern pinnule. c: Enlargement of (b) showing details of undulating anticlinal walls of the epidermis.
Text-fig. 1. a: Map of France showing geographic position of Saint-Bauzile (source: http://d-maps.com/m/europa/france/france/ france09.gif). b: Overview of the active diatomite quarry at the Montagne d'Andance, photograph taken in 2017. c: SEM image of a frustule of pennate diatom (cf. Navicula sp.) from Saint-Bauzile. d) SEM image of frustules forming a colony of centric diatoms (cf. Diatoma sp.) from Saint-Bauzile. in Evidence For Wildfires During Deposition Of The Late Miocene Diatomites Of The Konservat-Lagerstätte Lake Saint-Bauzile (Ardèche, France) - Preliminary Results
Text-fig. 1. a: Map of France showing geographic position of Saint-Bauzile (source: http://d-maps.com/m/europa/france/france/ france09.gif). b: Overview of the active diatomite quarry at the Montagne d'Andance, photograph taken in 2017. c: SEM image of a frustule of pennate diatom (cf. Navicula sp.) from Saint-Bauzile. d) SEM image of frustules forming a colony of centric diatoms (cf. Diatoma sp.) from Saint-Bauzile.
Text-fig. 1. Modern vegetation proxies as delivered by the Drudge 1 and 2 tools for Parschlug. Left column results from KovarEder et al. (2021) based on the floristic spectrum published by Kovar-Eder et al. (2004). The other three columns result from three variants using the enlarged floristic spectrum herein. Differences between variants 1–3 from this study are caused by differences in assignment of some taxa and morphotypes (see Appendix 1). European vegetation formations: Formation C – Subarctic, boreal and nemoral-montane open woodlands as well as subalpine and oro-Mediterranean vegetation; Formation D – Mesophytic and hygromesophytic coniferous and mixed broad-leaved-coniferous forests; Formation F – Mesophytic broadleaved deciduous and mixed broadleaved/conifer forests; Formation G – Thermophilous mixed deciduous broadleaved forests; Formation J – Mediterranean sclerophyllous forests and scrub; Formation K – Xerophytic coniferous forests, coniferous woodland and scrub. East Asian vegetation types: MCF China, Japan – Montane Coniferous Forests China, Honshu, Yakushima; BLDF N and NE Provinces, China – Broad-leaved Deciduous Forests of the Northern and Northeastern Provinces (China); BLDF Upper Yangtze, Honshu – Broad-leaved Deciduous Forest, Upper Yangtze Provinces, Mt. Emei, and Honshu; MMF China – Mixed Mesophytic Forest, Lower Yangtze Provinces; BLEF China, Japan – Broad-leaved Evergreen Forests, China, Japan; Meili Snow Mt. high altitude SCL and BLF, China – Meili Snow Mt., Sclerophyllous and broad-leaved forest zone (2,580-3,650 m alt.). (Designations of European vegetation formations follow Bohn et al. (2004) and Asian ones follow Kovar-Eder et al. (2021). in Floristic, Vegetation And Climate Assessment Of The Early/Middle Miocene Parschlug Flora Indicates A Distinctly Seasonal Climate
Text-fig. 1. Modern vegetation proxies as delivered by the Drudge 1 and 2 tools for Parschlug. Left column results from KovarEder et al. (2021) based on the floristic spectrum published by Kovar-Eder et al. (2004). The other three columns result from three variants using the enlarged floristic spectrum herein. Differences between variants 1–3 from this study are caused by differences in assignment of some taxa and morphotypes (see Appendix 1). European vegetation formations: Formation C – Subarctic, boreal and nemoral-montane open woodlands as well as subalpine and oro-Mediterranean vegetation; Formation D – Mesophytic and hygromesophytic coniferous and mixed broad-leaved-coniferous forests; Formation F – Mesophytic broadleaved deciduous and mixed broadleaved/conifer forests; Formation G – Thermophilous mixed deciduous broadleaved forests; Formation J – Mediterranean sclerophyllous forests and scrub; Formation K – Xerophytic coniferous forests, coniferous woodland and scrub. East Asian vegetation types: MCF China, Japan – Montane Coniferous Forests China, Honshu, Yakushima; BLDF N and NE Provinces, China – Broad-leaved Deciduous Forests of the Northern and Northeastern Provinces (China); BLDF Upper Yangtze, Honshu – Broad-leaved Deciduous Forest, Upper Yangtze Provinces, Mt. Emei, and Honshu; MMF China – Mixed Mesophytic Forest, Lower Yangtze Provinces; BLEF China, Japan – Broad-leaved Evergreen Forests, China, Japan; Meili Snow Mt. high altitude SCL and BLF, China – Meili Snow Mt., Sclerophyllous and broad-leaved forest zone (2,580-3,650 m alt.). (Designations of European vegetation formations follow Bohn et al. (2004) and Asian ones follow Kovar-Eder et al. (2021).
Text-fig. 7. Stereomicroscope microphotographs of plant remains sieved out of a sediment bulk sample (C3X) from bed GLA10 of Govone. a: Tetraclinis salicornioides (UNGER) KVAČEK, shoot fragment, MGPT-PU141083). b: Toddalia latisiliquata (R.LUDW.) H.-J. GREGOR, seed, MGPT-PU141084. c: Toddalia rhenana H.-J.GREGOR, seed, MGPT-PU141085. d: Eurya stigmosa (R.LUDW.) MAI, small seed with piths filled by organic remains and sediment, MGPT-PU141086. e: Eurya stigmosa (R.LUDW.) MAI, fragmentary seed, MGPT-PU141087. f: Visnea germanica MENZEL, fruit from two opposite sides, MGPT-PU141088. g: Symplocos casparyi R.LUDW., endocarp in lateral view from two opposite sides, MGPT-PU141089. Scale bar 1 mm. in Remains Of A Subtropical Humid Forest In A Messinian Evaporitebearing Succession At Govone, Northwestern Italy - Preliminary Results
Text-fig. 7. Stereomicroscope microphotographs of plant remains sieved out of a sediment bulk sample (C3X) from bed GLA10 of Govone. a: Tetraclinis salicornioides (UNGER) KVAČEK, shoot fragment, MGPT-PU141083). b: Toddalia latisiliquata (R.LUDW.) H.-J. GREGOR, seed, MGPT-PU141084. c: Toddalia rhenana H.-J.GREGOR, seed, MGPT-PU141085. d: Eurya stigmosa (R.LUDW.) MAI, small seed with piths filled by organic remains and sediment, MGPT-PU141086. e: Eurya stigmosa (R.LUDW.) MAI, fragmentary seed, MGPT-PU141087. f: Visnea germanica MENZEL, fruit from two opposite sides, MGPT-PU141088. g: Symplocos casparyi R.LUDW., endocarp in lateral view from two opposite sides, MGPT-PU141089. Scale bar 1 mm.
Text-fig. 5. Plant fragments from Govone with evidence of preserved cuticle. a: Decussate pair of leaves of "Thuja" saviana (C.T.GAUDIN) C.T.GAUDIN with a window (arrow) opened in the brownish cuticle, showing the yellowish mesophyll cells and some possible resin canals (dark), MGPT-PU141094. b: Angiosperm leaf fragment (from sample MGPT-PU141017) under the stereomicroscope, showing the blackish compressed mesophyll on the right and patches of cleaned, yellowish cuticle at the top (arrow). Scale bar 1 mm. in Remains Of A Subtropical Humid Forest In A Messinian Evaporitebearing Succession At Govone, Northwestern Italy - Preliminary Results
Text-fig. 5. Plant fragments from Govone with evidence of preserved cuticle. a: Decussate pair of leaves of "Thuja" saviana (C.T.GAUDIN) C.T.GAUDIN with a window (arrow) opened in the brownish cuticle, showing the yellowish mesophyll cells and some possible resin canals (dark), MGPT-PU141094. b: Angiosperm leaf fragment (from sample MGPT-PU141017) under the stereomicroscope, showing the blackish compressed mesophyll on the right and patches of cleaned, yellowish cuticle at the top (arrow). Scale bar 1 mm.
Text-fig. 4. Laminated silts with almost complete leaves at the top of bed GLA20: Dicotylophyllum sp. 3 (left: MGPTPU141032) and Laurophyllum sp. 2 (right: MGPT-PU141082). Scale bar 10 mm. in Remains Of A Subtropical Humid Forest In A Messinian Evaporitebearing Succession At Govone, Northwestern Italy - Preliminary Results
Text-fig. 4. Laminated silts with almost complete leaves at the top of bed GLA20: Dicotylophyllum sp. 3 (left: MGPTPU141032) and Laurophyllum sp. 2 (right: MGPT-PU141082). Scale bar 10 mm.
Text-fig. 6. Transmitted light microphotographs of permineralized wood from Govone. a, b: cf. Cupressinoxylon sp., radial section, MGPT-PU141105, a – nodular end of ray parenchyma (arrow), b – thick and pitted horizontal walls of ray parenchyma (arrow). c–f: Pinaceae gen. et sp. indet., MGPT-PU141107, c – abnormal discoloration due to ecological disruptions (radial section), d – rays up to 10 cells high, uniseriate, partly biseriate (black arrow), intercellular spaces observed (white arrows) (tangential section), e – large, thick-walled axial resin canal with more than 9 epithelial cells observed, axial resin canal diameter>60 Μm (transverse section), f – spiral thickenings due to compression (white arrow) (radial section). in Remains Of A Subtropical Humid Forest In A Messinian Evaporitebearing Succession At Govone, Northwestern Italy - Preliminary Results
Text-fig. 6. Transmitted light microphotographs of permineralized wood from Govone. a, b: cf. Cupressinoxylon sp., radial section, MGPT-PU141105, a – nodular end of ray parenchyma (arrow), b – thick and pitted horizontal walls of ray parenchyma (arrow). c–f: Pinaceae gen. et sp. indet., MGPT-PU141107, c – abnormal discoloration due to ecological disruptions (radial section), d – rays up to 10 cells high, uniseriate, partly biseriate (black arrow), intercellular spaces observed (white arrows) (tangential section), e – large, thick-walled axial resin canal with more than 9 epithelial cells observed, axial resin canal diameter>60 Μm (transverse section), f – spiral thickenings due to compression (white arrow) (radial section).
Text-fig. 3. a: Panoramic reconstruction of the portion of the Govone outcrop from intervals GLA10 to GLA20 in condition of low river level. b: Transported leaf assemblage in the bottom part of bed GLA20. c: Detail of the outcrop of the leaf-bearing bed GLA20 and the underlying wood-rich layer GLA19. in Remains Of A Subtropical Humid Forest In A Messinian Evaporitebearing Succession At Govone, Northwestern Italy - Preliminary Results
Text-fig. 3. a: Panoramic reconstruction of the portion of the Govone outcrop from intervals GLA10 to GLA20 in condition of low river level. b: Transported leaf assemblage in the bottom part of bed GLA20. c: Detail of the outcrop of the leaf-bearing bed GLA20 and the underlying wood-rich layer GLA19.
Text-fig. 2. Stratigraphic column of the Govone section with a detail of the sampled intervals on the right. CCS – Cassano Spinola Conglomerates; Gm and Gg – sedimentary cycles, respectively marl-dominated or gypsum-dominated; MES – Messinian Erosional Surface; MSC – Messinian Salinity Crisis; PLG – Primary Lower Gypsum; RLG – Resedimented Lower Gypsum. in Remains Of A Subtropical Humid Forest In A Messinian Evaporitebearing Succession At Govone, Northwestern Italy - Preliminary Results
Text-fig. 2. Stratigraphic column of the Govone section with a detail of the sampled intervals on the right. CCS – Cassano Spinola Conglomerates; Gm and Gg – sedimentary cycles, respectively marl-dominated or gypsum-dominated; MES – Messinian Erosional Surface; MSC – Messinian Salinity Crisis; PLG – Primary Lower Gypsum; RLG – Resedimented Lower Gypsum.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.