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8,537 results for “Openness”
Hippocampal RNA-seq in mice selectively bred for high and low open-field activity (OFA)
GEO Series GSE200043. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
Elucidation of the open chromatin regions in the bronchial lymph nodes of dairy calves experimentally challenged with bovine respiratory syncytial virus, using ATAC-Seq
GEO Series GSE148056. Bos taurus. 18 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
SALP, a new NGS library construction method especially useful for the high-throughput characterization of chromatin openness states
GEO Series GSE104162. Homo sapiens. 11 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Pilot open label clinical trial of oral ruxolitinib in patients with alopecia areata
GEO Series GSE80342. Homo sapiens. 31 samples. Type: Expression profiling by array.
Oct4 differentially regulates chromatin opening and enhancer transcription in pluripotent stem cells
GEO Series GSE174774. Mus musculus. 64 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Histone variant H3.3 facilitates open chromatin at promoters [CUT&TAG]
GEO Series GSE213039. Mus musculus. 28 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Circadian ribosome profiling reveals a role for the Period2 upstream opening reading frame in sleep.
GEO Series GSE231820. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Treatment of advanced liver fibrosis in HIV- and HCV-infected adults with simtuzumab, a monoclonal antibody against lysyl oxidase-like 2: Results of a 6-month open-label safety trial
GEO Series GSE73634. Homo sapiens. 48 samples. Type: Expression profiling by array.
Open Chromatin and HIF-binding in renal tubular cells
GEO Series GSE101064. Homo sapiens. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Open Chromatin and HIF-binding in renal tubular cells [FAIRE-seq]
GEO Series GSE101062. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
COCD: Catalog of Open Cluster Data First Extension
This table contains a list of 130 Galactic open clusters, found in the All-Sky Compiled Catalogue of 2.5 Million Stars (ASCC-2.5) and not included in the original Catalog of Open Cluster Data (COCD): it is known as the 1st Extension of the COCD (COCD-1). For these new clusters, the authors determined a homogeneous set of astrophysical parameters such as size, membership, motion, distance and age. In their previous work (the Browse table COCD based on the <a href="https://cdsarc.cds.unistra.fr/ftp/cats/J/A+A/438/1163">CDS Cat. J/A+A/438/1163</a>), 520 already-known open clusters out of a sample of 1700 clusters from the literature were confirmed in the ASCC-2.5 using independent, objective methods. Using these same methods, the whole sky was systematically screened for new clusters. The newly detected clusters show the same distribution over the sky as the known ones. It is found that without the a priori knowledge about existing clusters the authors' search lead to clusters which are, on average, brighter, have more members and cover larger angular radii than the 520 previously-known ones. On the basis of data on about 6,200 possible members (including about 2,200 most probable ones) and homogeneous methods of cluster parameter determination, the angular sizes of cluster cores and coronae, cluster heliocentric distances, colour-excesses, mean proper motions, and ages of 130 clusters and mean radial velocities of 69 clusters were established and collected in the COCD-1. Clusters in the catalogue are numbered in order of increasing J2000.0 Right Ascension. The 1st Extension of the Open Cluster Diagrams Atlas (OCDA-1) presents a set of open cluster diagrams used for the determination of parameters of the 130 newly discovered open clusters, and is intended to illustrate the quality of the constructed cluster membership, and the accuracy of the derived cluster parameters. Every diagram presents relations between various stellar data from the all sky catalog ASCC-2.5(Kharchenko, 2001, CDS Cat. <I/280>) in the area of the specific cluster. There are five diagrams provided for every cluster in the Atlas: the area map, the density profile, the vector point diagram, the "magnitude equation" (proper motion in each coordinate versus V magnitude) diagram, and the color-magnitude diagram. The 130 OCDA-1 PostScript plots (one file per cluster) are available as a remote data product for all of the entries in this table. This table was created by the HEASARC in May 2011 based on <a href="https://cdsarc.cds.unistra.fr/ftp/cats/J/A+A/440/403/">CDS Catalog J/A+A/440/403/</a> files cluster.dat and notes.dat. This is a service provided by NASA HEASARC .
ARC Code TI: Inference Kernel for Open Static Analyzers (IKOS)
IKOS is a C++ library designed to facilitate the development of sound static analyzers based on Abstract Interpretation. Specialization of a static analyzer for an application or family of applications is critical for achieving both precision and scalability. Developing such an analyzer is arduous and requires significant expertise in Abstract Interpretation.
The impact of deep space radiation on cognitive performance: From biological sex to biomarkers to countermeasures (Elevated Plus Maze, Novel Object Recognition, Open Field, Radial Arm Water Maze, and Three Chamber Social Isolation/Interaction)
In the coming decade, astronauts will travel back to the moon in preparation for future Mars missions. Exposure to galactic cosmic radiation (GCR) is a major obstacle for deep space travel. Using multivariate principal components analysis, we found sex dimorphic responses in mice exposed to accelerated charged particles to simulate GCR (GCRsim); males displayed impaired spatial learning, whereas females did not. Mechanistically, these GCRsim induced learning impairments corresponded with chronic microglia activation and synaptic alterations in the hippocampus. Temporary microglia depletion shortly after GCRsim exposure mitigated GCRsim induced deficits measured months after the radiation exposure. Furthermore, blood monocyte levels measured early after GCRsim exposure were predictive of the late learning deficits and microglia activation measured in the male mice. Our findings (i) advance our understanding of charged particle induced cognitive challenges, (ii) provide evidence for early peripheral biomarkers for identifying late cognitive deficits, and (iii) offer potential therapeutic strategies for mitigating GCR induced cognitive loss. This study derives results from the behavior assays Elevated Plus Maze, Novel Object Recognition, Open Field, Radial Arm Water Maze, and Three Chamber Social Isolation/Interaction. These data are related to the Flow Cytometry data in OSD-776 (blood), OSD-777 (Microglia), and OSD-778 (Synapse).
Lynga Open Clusters Catalog
This is a catalog of open cluster data, as compiled by Gosta Lynga, Lund Observatory. The aim of this catalog is to give salient data for all known open star clusters in our galaxy. As far as possible only published data values have been quoted; for some of the parameters, these values have been slected from references which can be obtained from the HEASARC. This data in part results from the merging of the data resulting from a joint project between K. Janes, C. Duke and Lynga, herein refered to as JDL data. The aim of that project was to discuss properties of the open cluster system by using existing data and by taking their accuracy into proper regard. Thus the data were assessed, mostly by Janes, weight assigned and weighted mean values derived of reddenings, turn-off colors and distances. This is a service provided by NASA HEASARC .
Wind 3DP SST Open Proton Energy-Angle Distributions
Proton energy-angle distributions 70 keV - 6.8 MeV, often at 24 sec, SST Open, Wind 3DP - R. Lin (UC Berkeley)
COCD: Catalog of Open Cluster Data
The Catalog of Open Cluster Data (COCD) is a result of studies of the wide neighborhoods of 513 open clusters and 7 compact associations carried out in the high-precision homogeneous All-Sky Compiled Catalog of 2.5 Million Stars (ASCC-2.5, Kharchenko 2001, <a href="https://cdsarc.cds.unistra.fr/ftp/cats/I/280">CDS Cat. <I/280></a>). On the basis of data on about 33,000 possible members (including about 10,000 most probable ones) and homogeneous methods of cluster parameter determination, the angular sizes of cluster cores and coronae, cluster heliocentric distances, mean proper motions, mean radial velocities and ages were established and collected in the COCD. These include cluster distances for 200 clusters, average cluster radial velocities for 94 clusters, and cluster ages for 195 clusters derived for the first time. Clusters in the catalogue are sequenced in their Right Ascension J2000 order. The Open Cluster Diagrams Atlas (OCDA) presents a set of open cluster diagrams used for the determination of parameters of the 513 open clusters and 7 compact associations, and is intended to illustrate the quality of the constructed cluster membership (Kharchenko et al. 2004, CDS Cat. <J/AN/325/740>), and the accuracy of the derived cluster parameters. Every diagram presents relation between various stellar data from the ASCC-2.5 in the area of the specific cluster. There are five diagrams provided for every cluster in the Atlas: the area map, the density profile, the vector point diagram, the magnitude equation diagram and the color-magnitude diagram. The OCDA PostScript plots (one file per cluster) are available as a remote data product for entries in this table. This table was created by the HEASARC in May 2011 based on <a href="https://cdsarc.cds.unistra.fr/ftp/cats/J/A+A/438/1163">CDS Catalog J/A+A/438/1163</a> files cocd.dat and notes.dat. This is a service provided by NASA HEASARC .
New Optically Visible Open Clusters and Candidates Catalog
This is a new catalog of open clusters in the Galaxy which updates the previous catalogs of Lynga (1987, <a href="https://cdsarc.cds.unistra.fr/ftp/cats/VII/92">CDS Cat. VII/92</a>, the HEASARC Browse table now called LYNGACLUST) and of Mermilliod (1995, in Information and On-Line Data in Astronomy, ed. D. Egret & M. A. Albrecht (Dordrecht: Kluwer), 127) (included in the WEBDA database, <a href="http://www.univie.ac.at/webda/">http://www.univie.ac.at/webda/</a>). New objects and new data, in particular, data on kinematics (proper motions) that were not present in the old catalogs, have been included. Virtually all of the clusters presently known are included, which represents a large increase in the number of objects (almost 1,000) relative to the Lynga Catalog. In total, 99.7% of the objects have estimates of their apparent diameters, and 74.5% have distance, E(B-V) and age determinations. Concerning the data on kinematics, 54.7% have their mean proper motions listed, 25% their mean radial velocities, and 24.2% have both information simultaneously. Acknowledgments: Extensive use has been made by the authors of the SIMBAD and WEBDA databases. This project is supported by FAPESP (grant number 03/12813-4) and CAPES (CAPES-GRICES grant number 040/2008). This database table was originally created by the HEASARC in September 2002 based on the CDS version of the catalog. In March 2006, the HEASARC updated the table to use instead the following file obtained from the authors' web site: <a href="http://www.astro.iag.usp.br/ocdb/file/clusters.txt">http://www.astro.iag.usp.br/ocdb/file/clusters.txt</a>. In August 2017, the HEASARC reverted to using the CDS version of this catalog, available as the file clusters.dat at <a href="http://cdsarc.u-strasbg.fr/ftp/cats/B/ocl/">http://cdsarc.u-strasbg.fr/ftp/cats/B/ocl/</a>. This is a service provided by NASA HEASARC .
Alpha Per Open Cluster XMM-Newton X-Ray Source Catalog
This table contains results from the analysis of an archival XMM-Newton observation of part of the Alpha Persei open cluster. The authors detected 102 X-ray sources in the energy band from 0.3 to 8.0 keV, of which 39 of them are associated with the cluster as evidenced by their appropriate magnitudes and colors from Two Micron All Sky Survey (2MASS) photometry. In the reference paper, the authors extend the X-ray luminosity distribution (XLD) of the Alpha Persei cluster for M dwarfs, to add to the XLD found for hotter dwarfs from spatially extensive surveys of the whole cluster by ROSAT. Some of the hotter stars are identified as a background, possible slightly older group of stars at a distance of approximately 500 pc. Alpha Per is a young open cluster, found to be 50 Myr old from its upper main sequence turnoff morphology (Meynet et al. 1993, A&AS, 98, 477). More recently, Stauffer et al. (1999, ApJ, 527, 219) have found an age of 90 Myr from the low mass lithium depletion boundary. In addition to being relatively nearby (170 pc; Randich et al. 1996, A&A, 305, 785), the Alpha Per cluster is also lightly reddened (E(B - V ) = 0.09 mag; Meynet et al. 1993), making the data interpretation relatively robust. A fraction of the Alpha Per cluster was observed by XMM-Newton as part of the Mission Scientist Guaranteed Time (Pallavicini et al., 2004, MmSAI, 75, 434). A 60-ks observation was obtained on 2000 September 5 using the EPIC MOS and PN cameras on board XMM-Newton with a pointing centered at RA: 3<sup>h</sup> 26<sup>m</sup> 16<sup>s</sup> and Dec: 48<sup>o</sup> 50<sup>m</sup> 29<sup>s</sup> (J2000.0). This table was created by the HEASARC in June 2014 based on <a href="https://cdsarc.cds.unistra.fr/ftp/cats/J/AJ/145/143">CDS Catalog J/AJ/145/143</a> files table1.dat and table2.dat. This is a service provided by NASA HEASARC .
Open Source And General Resource Software
This dataset lists out all software in use by NASA
MKAD (Open Sourced Code)
The Multiple Kernel Anomaly Detection (MKAD) algorithm is designed for anomaly detection over a set of files. It combines multiple kernels into a single optimization function using the One Class Support Vector Machine (OCSVM) framework. Any kernel function can be combined in the algorithm as long as it meets the Mercer conditions, however for the purposes of this code the data preformatting and kernel type is specific to the Flight Operations Quality Assurance (FOQA) data and has been integrated into the coding steps. For this domain, discrete binary switch sequences are used in the discrete kernel, and discretized continuous parameter features are used to form the continuous kernel. The OCSVM uses a training set of nominal examples (in this case flights) and evaluates test examples for anomaly detection to determine whether they are anomalous or not. After completing this analysis the algorithm reports the anomalous examples and determines whether there is a contribution from either or both continuous and discrete elements.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.