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4,144 results for “ITS barcode”
FIGURES 12–16 in A new black fly species from Brazil, closely related to Simulium guianense Wise (Diptera, Simuliidae), revealed by morphology and DNA barcoding
FIGURES 12–16. Female of Simulium litobranchium n. sp. (Diptera: Simuliidae). 12. Cercus and anal lobe in situ, ventral view. 13. Cercus and anal lobe, mounted between slide and coverslip, lateral view. 14. Hypogynial valves, ventral view. 15. Genital fork. 16. Cuticular microspines of spermatheca.
FIGURES 51–56 in A new black fly species from Brazil, closely related to Simulium guianense Wise (Diptera, Simuliidae), revealed by morphology and DNA barcoding
FIGURES 51–56. Pupal gill filaments and apex of gills. Figs 51–52. Simulium litobranchium n. sp. (Diptera: Simuliidae). Figs 53–54. Simulium guianense. Figs 55–56. Simulium duodenicornium.
FIGURES 26–32 in A new black fly species from Brazil, closely related to Simulium guianense Wise (Diptera, Simuliidae), revealed by morphology and DNA barcoding
FIGURES 26–32. Male of Simulium litobranchium n. sp. (Diptera: Simuliidae). 26. Wing base. 27. Antenna. 28. Maxillary palp. 29. Median sclerite. 30. Aedeagal membrane and paramere. 31. Gonocoxite and gonostylus, mounted between slide and coverslip, lateral view. 32. Spinule at the apex of gonostylus.
FIGURE 77. A Kimura 2 in A new black fly species from Brazil, closely related to Simulium guianense Wise (Diptera, Simuliidae), revealed by morphology and DNA barcoding
FIGURE 77. A Kimura 2-parameter neighbor-joining tree for 4 nominal species of Neotropical black flies S. (Thyrsopelma) subgenus. Scale bar = 2%
FIGURE 9 in Description and DNA barcoding assessment of the new species Deutonura gibbosa (Collembola: Neanuridae: Neanurinae), a common springtail of Alps and Jura
FIGURE 9. Neighbor joining tree (K2P) of five species of the phlegraea group of the genus Deutonura based on the COI 5' 'barcoding fragment'. Bootstrap support values showed on the branches. The upper and lower side of the triangle represent respectively the maximum and minimum of genetic distances within the species.
FIGURES 7–8 in Description and DNA barcoding assessment of the new species Deutonura gibbosa (Collembola: Neanuridae: Neanurinae), a common springtail of Alps and Jura
FIGURES 7–8. Arrangement of tubercles and chaetae on the tergite of Abd. V–VI in a paratype of Deutonura deficiens sylvatica (Fig. 7) and in a paratype of D. gibbosa sp. nov. (Fig. 8, Abd. VI not visible in dorsal view); 1, 2, 3: chaetae Di1, Di2 and Di3 on Abd. V.
FIGURES 2–6 in Description and DNA barcoding assessment of the new species Deutonura gibbosa (Collembola: Neanuridae: Neanurinae), a common springtail of Alps and Jura
FIGURES 2–6. Deutonura gibbosa sp. nov.: 2, dorsal chaetotaxy and tubercles (represented by their undercuticular reticulations); 3, labrum; 4, labium (l—lateral chaeta of labrum); 5, tibiotarsus and claw of leg I (dotted line: limit of secondary granules on dorsal side); 6, ventral chaetotaxy of abdomen. Muscular insertions as punctuated areas; pp: pseudopora.
FIGURE 1 in Description and DNA barcoding assessment of the new species Deutonura gibbosa (Collembola: Neanuridae: Neanurinae), a common springtail of Alps and Jura
FIGURE 1. Distribution map of Deutonura gibbosa sp. nov. (triangles, Alps and southern border of Jura) and D. deficiens sylvatica (circles, western France, northwestern Spain and Sardinia)). Large triangle and large circle: type localities; only localities from which we have examined specimens are represented for Sardinia.
FIGURES 15–18 in Taxonomic decision as a compromise: Acasis appensata (Eversmann, 1832) in Central Italy—a case of conflicting evidence between DNA barcode and morphology (Lepidoptera: Geometridae)
FIGURES 15–18. Female genitalia of Acasis. 15, A. appensata appensata (Eversmann), slide G 1459; 16, A. appensata callaina ssp. nov., paratype, slide G 1456; 17, ditto, paratype, slide G 1458; 18, A. viretata (Hübner), slide G 1463.
FIGURES 7–14 in Taxonomic decision as a compromise: Acasis appensata (Eversmann, 1832) in Central Italy—a case of conflicting evidence between DNA barcode and morphology (Lepidoptera: Geometridae)
FIGURES 7–14. Male genitalia of Acasis. 7–8, A. appensata appensata (Eversmann), slide G 1460; 9–10, A. appensata callaina ssp. nov., paratype, slide G 1464; 11–12, ditto, paratype, slide G 1461; 13–14, A. viretata (Hübner), slide G 1462.
FIGURES 1–6 in Taxonomic decision as a compromise: Acasis appensata (Eversmann, 1832) in Central Italy—a case of conflicting evidence between DNA barcode and morphology (Lepidoptera: Geometridae)
FIGURES 1–6. Adults of Acasis. 1–2, A. appensata appensata (Eversmann); 3–4, A. appensata callaina ssp. nov.; 5–6, A. viretata (Hübner).
FIGURES 33–40. Tanytarsus larvae mandibles with accessory dorsal teeth. 33 in Exploring unknown life stages of Arctic Tanytarsini (Diptera: Chironomidae) with DNA barcoding
FIGURES 33–40. Tanytarsus larvae mandibles with accessory dorsal teeth. 33: T. lugens, 34: T. bathophilus, 35: T. mancospinosus, 36: T. minutipalpus, 37: T. gracilentus, 38: T. lapponicus, 39: T. recurvatus, 40: T. heliomesonyctios.
FIGURES 27–32. Tanytarsus heliomesonyctios. 28 in Exploring unknown life stages of Arctic Tanytarsini (Diptera: Chironomidae) with DNA barcoding
FIGURES 27–32. Tanytarsus heliomesonyctios. 28: premandible, 29–30: mentum, 31: mouthparts ventral view, 32: mandible.
FIGURES 2–16 in Exploring unknown life stages of Arctic Tanytarsini (Diptera: Chironomidae) with DNA barcoding
FIGURES 2–16. Tanytarsini of Svalbard, association of adult male hypopygia with larval head capsules and posterior parapods. Columns from left to right: Tanytarsus heliomesonyctios (2, 7, 12), Paratanytarsus austriacus (3, 8, 13), Micropsectra radialis (2, 9, 14), Micropsectra insignilobus (5, 10, 15) and Micropsectra logani (6, 11, 16). Scale bar for hypopygia = 300 µm, for head capsules and parapods = 100 µm.
FIGURE 1 in Exploring unknown life stages of Arctic Tanytarsini (Diptera: Chironomidae) with DNA barcoding
FIGURE 1. Neighbour joining ID-tree based on partial COI-sequences (DNA barcodes) and the Kimura 2-parameter substitution model. Values above branches are bootstrap support. DNA barcodes enabled association of different life stages.
FIGURES 17–26. Larvae. 17–21 in Exploring unknown life stages of Arctic Tanytarsini (Diptera: Chironomidae) with DNA barcoding
FIGURES 17–26. Larvae. 17–21: Micropsectra insignilobus. 17: spur of antennal pedestal, 18: antenna, 19: pecten epipharyngis, 20: mentum, 21: mandible. 22–26: Micropsectra radialis. 22: antennal pedestal, 23–24: premandible, 25: mentum, 26: mandible.
FIGURE 3. Afropictinus species, habitus. A in Monophyly, review, six new species and DNA barcode of micropterous Afromontane Afropictinus (Heteroptera: Aradidae)
FIGURE 3. Afropictinus species, habitus. A: A. hylas sp. nov., specimen 5771, male, 3.20 mm, not DNA bardcoded; B: A. hylas sp. nov., specimen 3976, male, 3.75 mm, not DNA barcoded; C: A. hylas sp. nov., specimen 3983, female, 3.90 mm; D: A. hylas sp. nov., specimen 5774, female, 3.80 mm; E: A. idas sp. nov., holotype, specimen 3804, male, 3.55 mm; F: A. idas sp. nov., paratype, specimen 3820, female, 4.00 mm; G: A. idas sp. nov., specimen 3911, male, 3.70 mm, not DNA barcoded; H: A. kahuzianus sp. nov., holotype, male, 4.10 mm, not DNA barcoded; I: A. kahuzianus sp. nov., specimen BIOUG02096-A01, female, 4.40 mm; J: A. kahuzianus sp. nov., paratype, female, 4.10 mm, not DNA barcoded; K: A. nauplius sp. nov., holotype, specimen 5721, male, 4.20 mm; L: A. nauplius sp. nov., paratype, specimen 5719, male, 4.20 mm.
FIGURE 4 in Monophyly, review, six new species and DNA barcode of micropterous Afromontane Afropictinus (Heteroptera: Aradidae)
FIGURE 4. Maximum Likelihood inference phylogram of Afropictinus flat bugs (the ingroup is in black, the outgroup is in grey). The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. Afropictinus terminal labels consist of a taxonomic name, followed by the BOLD Sample ID, then by locality, then by sample number. Digits at internodes are bootstrap values. Terminals marked with an eye symbol have their habitus illustrated on Figs. 2 and 3. Clades marked with a mount symbol are those geographically different that their sister-group. Holotypes are marked by "HT". Habitus on the plate is that of a male of the type species.
FIGURE 2. Afropictinus species, habitus. A in Monophyly, review, six new species and DNA barcode of micropterous Afromontane Afropictinus (Heteroptera: Aradidae)
FIGURE 2. Afropictinus species, habitus. A: A. castor sp. nov., holotype, specimen 5749, male. 3.45 mm; B: A. castor sp. nov., specimen 5761, male, 3.05 mm; C: A. castor sp. nov., specimen 5725, male, 3.25 mm; D: A. castor sp. nov., specimen 5735, female, 3.65 mm; E: A. congoensis, male (Nyakabuye), 3.35 mm, not DNA barcoded; F: A. congoensis, female (Nyakabuye), 4.35 mm, not DNA barcoded; G: A. congoensis, female (Nyakabuye), 3.90 mm, not DNA barcoded; H: A. nabu sp. nov., holotype, specimen 8860, male, 3.90 mm; I: A. hylas sp. nov., holotype, specimen 3882, male, 3.05 mm; J: A. hylas sp. nov., paratype, specimen 3884, female, 3.60 mm; K: A. hylas sp. nov., specimen 5773, female, 3.80 mm; L: A. hylas sp. nov., specimen 3969, male, 3.25 mm.
FIGURES 63–66 in Unravelling cryptic species diversity in eastern Nearctic paper wasps, Polistes (Fuscopolistes), using male genitalia, morphometrics and DNA barcoding, with descriptions of two new species (Hymenoptera: Vespidae)
FIGURES 63–66. Median expansion of aedeagus, ventrolateral view: 63. Polistes fuscatus (MD, Anne Arundel Co.), 64. P. metricus (MD, Anne Arundel Co.), 65. P. hirsuticornis sp. nov. (MD, Anne Arundel Co.), 66. P. parametricus sp. nov. (MD, Prince George's Co.).
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.