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1,666
datasets available to search
ShareScore release 0.9.0
Dataset results
1,666 results for “human genome”
An integrated toolkit for human microglia functional genomics
GEO Series GSE244653. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide DNA Methylation Comparison between Live Human Brain and Peripheral Tissues within Individuals
GEO Series GSE111165. Homo sapiens. 147 samples. Type: Methylation profiling by genome tiling array.
Genome-wide chromatin accessibility data from cultured human fetal lung tip-derived organoids at different stages of lung development
GEO Series GSE178527. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A genome-wide analysis of open chromatin in human tracheal epithelial cells reveals novel candidate regulatory elements for lung function (DNase-hypersensitivity)
GEO Series GSE52179. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
High-resolution genome-wide dissection of transcriptional regulatory activity and function in human cells
GEO Series GSE104001. Homo sapiens. 11 samples. Type: Other; Expression profiling by high throughput sequencing.
Whole human genome expression analysis on left ventricular free wall heart tissue samples
GEO Series GSE84796. Homo sapiens. 17 samples. Type: Expression profiling by array.
Custom scripts used in the study "Nucleosome positioning stability is a modulator of germline mutation rate variation across the human genome"
<p>Custom scripts and associated data used in the study "Nucleosome positioning stability is a modulator of germline mutation rate variation across the human genome"</p>
Indexed hg38 human genome from NCBI
<p>Raw data obtained from https://www.ncbi.nlm.nih.gov/assembly/88331</p> <p>Processed using</p> <p>- bwa mem for indexing</p>
Data from: Genome-wide association studies in dogs and humans identify ADAMTS20 as a risk variant for cleft lip and palate
Cleft lip with or without cleft palate (CL/P) is the most commonly occurring craniofacial birth defect. We provide insight into the genetic etiology of this birth defect by performing genome-wide association studies in two species: dogs and humans. In the dog, a genome-wide association study of 7 CL/P cases and 112 controls from the Nova Scotia Duck Tolling Retriever (NSDTR) breed identified a significantly associated region on canine chromosome 27 (unadjusted p=1.1 x 10-13; adjusted p= 2.2 x 10-3). Further analysis in NSDTR families and additional full sibling cases identified a 1.44 Mb homozygous haplotype (chromosome 27: 9.29 – 10.73 Mb) segregating with a more complex phenotype of cleft lip, cleft palate, and syndactyly (CLPS) in 13 cases. Whole-genome sequencing of 3 CLPS cases and 4 controls at 15X coverage led to the discovery of a frameshift mutation within ADAMTS20 (c.1360_1361delAA (p.Lys453Ilefs*3)), which segregated concordant with the phenotype. In a parallel study in humans, a family-based association analysis (DFAM) of 125 CL/P cases, 420 unaffected relatives, and 392 controls from a Guatemalan cohort, identified a suggestive association (rs10785430; p =2.67 x 10-6) with the same gene, ADAMTS20. Sequencing of cases from the Guatemalan cohort was unable to identify a causative mutation within the coding region of ADAMTS20, but four coding variants were found in additional cases of CL/P. In summary, this study provides genetic evidence for a role of ADAMTS20 in CL/P development in dogs and as a candidate gene for CL/P development in humans.
Analysis of Human Genomic DNA in Embryo's Culture Media
ClinicalTrials.gov study NCT02359747. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Pivotal Assessment of the Effects of Bioactive on Health and Wellbeing. From Human Genome to Food Industry
ClinicalTrials.gov study NCT02702713. IPD Sharing: YES. Countries: 4. Publications: 0.
Analysis of Human Knee Joint Fluid Using Metabonomic, Genomic and Tribology Techniques
ClinicalTrials.gov study NCT02565160. IPD Sharing: NO. Countries: 1. Publications: 0.
Genomic DNA in Human Blastocoele Fluid
ClinicalTrials.gov study NCT01780415. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Genome Sequencing of Human Cancer Tissues
ClinicalTrials.gov study NCT02105545. IPD Sharing: NO. Countries: 1. Publications: 0.
Genome Analysis of Human Endogenous Retroviruses (HERVs)(COVID19)
ClinicalTrials.gov study NCT06775457. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Genomic Tools for Studying the Ecology of the Human Vaginal Microflora
ClinicalTrials.gov study NCT00576797. IPD Sharing: Not stated. Countries: 1. Publications: 0.
In Vivo Study of THC-induced Immune-genome Changes at Single Cell Solution in HIV-infected Humans
ClinicalTrials.gov study NCT04920539. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Comparative analysis of genomic features of human HIV-1 infection and primate models of SIV infection
GEO Series GSE28128. Homo sapiens. 79 samples. Type: Expression profiling by array.
Genome-wide analysis of the altered gene expression in the transgenic mice ectopically expressing the human SRY. [brain]
GEO Series GSE97843. Mus musculus. 6 samples. Type: Expression profiling by array.
Array-based assay detects genome-wide 5-methylcytosine and 5-hydroxymethlycytosine in non-human primates and mice
GEO Series GSE49177. Macaca mulatta; Homo sapiens; Pan troglodytes; Mus musculus. 61 samples. Type: Methylation profiling by genome tiling array.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.