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zenodo32/100

FIGURE 1 in A practical approach to revise the Oxynoemacheilus bergianus species group (Teleostei: Nemacheilidae)

FIGURE 1. Maximum likelihood estimation of the phylogenetic relationships based on the mitochondrial COI barcode region (GTR model, discrete Gamma distribution for rate differences with 5 categories +G parameter = 0.1781). Nucleotide positions with less than 98% site coverage were eliminated, resulting in 581 analysed positions. Numbers of major nodes indicate bootstrap values above 80 from 1000 pseudoreplicates from the ML, MP and NJ method. Solid black bars right to the specimen labels indicate species demarcation results from PTP followed by the results of the mPTP approach as dashed bars and the ASAP partitions in grey. Note that the dashed bar left extends to the right side including O. parvinae. The tree is drawn to scale (except to the outgroup) with branch lengths depicting number of substitutions per site.

opennotspecifiedApr 2022View details →
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FIGURE 8 in A practical approach to revise the Oxynoemacheilus bergianus species group (Teleostei: Nemacheilidae)

FIGURE 8. Oxynoemacheilus bergianus from Tigris drainage described as O. longipinnis; not preserved, about 45 mm SL; Iran: Changole River. Photo: Hamed Mousavi-Sabet.

opennotspecifiedApr 2022View details →
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FIGURE 4 in A practical approach to revise the Oxynoemacheilus bergianus species group (Teleostei: Nemacheilidae)

FIGURE 4. Oxynoemacheilus bergianus, left, from top: not preserved, about 60 mm SL; Iran: Qara Chai in Lake Namak basin, photo: Kai Borkenhagen; not preserved, about 60 mm SL; Iran: Lake Urmia basin, photo: Kiavash Golzarianpour; FSJF 2561, 63 mm SL; Turkey: stream Eğri; FSJF 2547, 67 mm SL; Turkey stream Malcılı, both Euphrates drainage; right, from top: FSJF 3429, 71 mm SL; Turkey: stream Arkaçayırlar; not preserved, about 60 mm SL; Turkey: stream west of Eleşkirt; not preserved, about 45 mm SL; same data as FSJF 3180; Turkey: stream 4 km south of Kandilli; FSJF 3674, 59 mm SL; Turkey: stream Kaleli, all from Euphrates drainage.

opennotspecifiedApr 2022View details →
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FIGURE 2 in A practical approach to revise the Oxynoemacheilus bergianus species group (Teleostei: Nemacheilidae)

FIGURE 2. Records of species of the O. bergianus group. Different colours indicate different molecular groups within species. Grey circles indicate records of O. simavicus without assignment to a molecular group.

opennotspecifiedApr 2022View details →
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FIGURE 11 in A practical approach to revise the Oxynoemacheilus bergianus species group (Teleostei: Nemacheilidae)

FIGURE 11. Oxynoemacheilus bergianus, ventral view of bony swim bladder capsules. Upper row, from left: FSJF 3216, 57 mm SL, 56 mm SL, 47 mm SL, 39 mm SL, Sefid drainage, Iran; middle row, from left: ZM-CBSU 1163, 57 mm SL; ZM-CBSU 1166, 43 mm SL; FSJF 4056, 53 mm SL, 56 mm SL (= O. longipinnis); lower row, from left: FSJF 4053, 70 mm SL, 70 mm SL, 51 mm SL, 55 mm SL (= O. parvinae).

opennotspecifiedApr 2022View details →
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FIGURE 7 in A practical approach to revise the Oxynoemacheilus bergianus species group (Teleostei: Nemacheilidae)

FIGURE 7. Oxynoemacheilus bergianus from Seyhan (FSJF 2983) and Kızılırmak drainages (O. samanticus); left, from top: FSJF 2983, 77 mm SL; 60 mm SL; Turkey: stream Zamantı; FSJF 2880, 62 mm SL; Turkey: stream Yıldız; right, from top: FSJF 3150, 68 mm SL; Turkey: stream Devrez; FSJF 3155, 53 mm SL; Turkey: stream Terme; FSJF 3137, 66 mm SL; Turkey: stream Hamamözü.

opennotspecifiedApr 2022View details →
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FIGURE 10. Oxynoemacheilus bergianus from the upper Tigris, FSJF 2923 61 in A practical approach to revise the Oxynoemacheilus bergianus species group (Teleostei: Nemacheilidae)

FIGURE 10. Oxynoemacheilus bergianus from the upper Tigris, FSJF 2923 61 mm SL; Turkey: stream Sason; FSJF 2873 1, 56 mm SL; Turkey: Tigris 5 km north of Maden.

opennotspecifiedApr 2022View details →
zenodo32/100

Practical Canopy for New York City - Data Layer and Summarized Results

<p><strong>Summary:</strong></p> <p>The files available here include a spatial data layer that represents the output of an analysis of opportunity for additional tree canopy in New York City (NYC) that considers factors that influence where trees can be planted and where canopy can grow, &#39;practical canopy,&#39; as well as summaries of this data layer by NYC Borough, Community District, City Council District, and Neighborhood Tabulation Area. Links to a preprint and peer-reviewed paper describing the methods and context for this work are available below. The practical canopy layer is the result of a spatial model, and is thus an approximation based on available data and assumptions. See the associated materials for full discussion of limits and potential uses of this work.</p> <p>If you do not find what you are looking for here, contact Michael Treglia, Lead Scientist with The Nature Conservancy in New York, Cities Program, at michael.treglia@tnc.org.</p> <p>&nbsp;</p> <p><strong>Terms of Use</strong></p> <p>&copy; The Nature Conservancy. This material is provided as-is, without warranty under a Creative Commons Attribution-NonCommercial-ShareAlike License as set forth in our Conservation Gateway Terms of Use (available at: <a href="http://conservationgateway.org/Pages/Terms-of-Use.aspx">http://conservationgateway.org/Pages/Terms-of-Use.aspx</a>)</p> <p>If using these data, please cite the both the <a href="https://www.frontiersin.org/articles/10.3389/frsc.2022.944823/full">peer-reviewed paper</a> and this set of data, based on the following recommended citations:</p> <p>Treglia, M. L., Piland, N. C., Leu, K., Van Slooten, A., &amp; Maxwell, E. N. (2022). Understanding opportunities for urban forest expansion to inform goals: working toward a virtuous cycle in New York City. <em>Frontiers in Sustainable Cities</em>. 4:944823. doi: 10.3389/frsc.2022.944823</p> <p>Treglia, M. L., Piland, N. C., Leu, K., Van Slooten, A., &amp; Maxwell, E. N. (2022). Practical Canopy for New York City&mdash;Data Layer and Summarized Results [Data set]. <em>Zenodo</em>. doi: 10.5281/zenodo.6547492</p> <p>&nbsp;</p> <p>The manuscript for this work is also available in a <a href="https://www.preprints.org/manuscript/202206.0106/v1">preprint</a>, with the following citation:</p> <p>Treglia, M. L., Piland, N. C., Leu, K., Van Slooten, A., &amp; Maxwell, E. N. (2022). Understanding opportunities for urban forest expansion to inform goals: working toward a virtuous cycle in New York City. <em>Preprints</em>.&nbsp;2022060106. doi: 10.20944/preprints202206.0106.v1</p> <p>&nbsp;</p> <p><strong>Contents</strong></p> <p><em><strong>nyc_practicalcanopy_datalayer.zip</strong></em> - Zipped folder with the practical canopy data layer that resulted from the work described in the associated preprint, as both GeoPackage (.gpkg) and Esri File Geodatabase (.gdb) files, with Data Dictionary files in .docx and .html formats. Both the .gpkg and .gdb files are zipped within the .zip file to save space, such that users may uncompress the format they prefer to use. The uncompressed .gdb file is nearly 3 gb; the uncompressed .gpkg file is about 10 gb.</p> <p><em><strong>nyc_practicalcanopy_summary_results.zip</strong></em> - Zipped folder summarized results of the practical canopy analysis by NYC Borough, Community District, City Council District, and Neighborhood Tabulation Area. Data are available as non-spatial .csv files and as both GeoPackage (.gpkg) and Esri File Geodatabase (.gdb) files; Data Dictionaries are included in both .docx and .html formats.</p>

opencc-by-nc-3.0Jun 2022View details →
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Supplementary material 2 from: Sturm U, Heyne E, Herrmann E, Arends B, Dieter A-L, Dorfman E, Drauschke F, Heller N, Kahn R, Kaiser K, Koch G, Kramar N, Mansilla Sánchez A, Mauelshagen F, Nadim T, Pell R, Petersen M, Schmidt-Loske K, Scholz H, Sterling C, Trischler H, Wagner S (2022) Anthropocenic Objects. Collecting Practices for the Age of Humans. Research Ideas and Outcomes 8: e89446. https://doi.org/10.3897/rio.8.e89446

Flyer: How to collect, store and curate objects in the Anthropocene? On participatory and digital collections.

opencc-zeroJul 2022View details →
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Supplementary material 1 from: Sturm U, Heyne E, Herrmann E, Arends B, Dieter A-L, Dorfman E, Drauschke F, Heller N, Kahn R, Kaiser K, Koch G, Kramar N, Mansilla Sánchez A, Mauelshagen F, Nadim T, Pell R, Petersen M, Schmidt-Loske K, Scholz H, Sterling C, Trischler H, Wagner S (2022) Anthropocenic Objects. Collecting Practices for the Age of Humans. Research Ideas and Outcomes 8: e89446. https://doi.org/10.3897/rio.8.e89446

Flyer: What is an Anthropocenic Object? Transdisciplinary Perspectives on Natural, Cultural and Hybrid Objects

opencc-zeroJul 2022View details →
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Supplementary material 4 from: Sturm U, Heyne E, Herrmann E, Arends B, Dieter A-L, Dorfman E, Drauschke F, Heller N, Kahn R, Kaiser K, Koch G, Kramar N, Mansilla Sánchez A, Mauelshagen F, Nadim T, Pell R, Petersen M, Schmidt-Loske K, Scholz H, Sterling C, Trischler H, Wagner S (2022) Anthropocenic Objects. Collecting Practices for the Age of Humans. Research Ideas and Outcomes 8: e89446. https://doi.org/10.3897/rio.8.e89446

Keynote Exhibiting the Anthropocene - and the Technosphere - means breaking away from established knowledge orders

opencc-zeroJul 2022View details →
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FIGURE 5 in Diversity of Cichlid Fishes (Cichliformes: Cichlidae) in Chiapas, Mexico: A practical identification key with updated distribution maps

FIGURE 5. Geographic distribution of species cichlids of Chiapas (continuation). The symbols indicate the locations of distribution within Chiapas.

opennotspecifiedAug 2022View details →
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FIGURE 4 in Diversity of Cichlid Fishes (Cichliformes: Cichlidae) in Chiapas, Mexico: A practical identification key with updated distribution maps

FIGURE 4. Geographic distribution of species cichlids of Chiapas. The symbols indicate the locations of distribution within Chiapas.

opennotspecifiedAug 2022View details →
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FIGURE 1 in Diversity of Cichlid Fishes (Cichliformes: Cichlidae) in Chiapas, Mexico: A practical identification key with updated distribution maps

FIGURE 1. Main largest basins in Chiapas and main bodies of water in the state (represented with the symbol ♦) and neighboring regions (represented with the symbol ♦). I (Chixoy River), II (Lacantún River), III (Montebello Lagoons), IV (Tzendales River), V (Lacanjá River), VI (Usumacinta River), VII (Catazajá Lagoons), VIII (Tulijá River), IX (Pichucalco River), X (Mezcalapa River), XI (Grande River), XII (La Venta River), XIII (Santo Domingo River), XIV (Zanatenco River), XV (Margaritas River), XVI (Chantuto-Panzacola estuarine lagoon system), and XVII (Suchiate River), XVIII (Coatzacoalcos River), XIX (Tonalá River), XX (Ostuta River), XXI (Candelaria River), XXII (Champotón River), XXIII (Izabal Lake), XXIV (Polochic River) and XXV (Motagua River).

opennotspecifiedAug 2022View details →
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FIGURE 3 in Diversity of Cichlid Fishes (Cichliformes: Cichlidae) in Chiapas, Mexico: A practical identification key with updated distribution maps

FIGURE 3. Cichlids that are distributed in Chiapas (continuation). *Non-native species. A. Tthorichthys helleri. B. T. meeki. C. T. pasionis. D. T. salvini. E. Vieja bifasciata. F. V. breidohri. G. V. guttulata. H. V. hartwegi. I. V. melanurus. J. V. zonata. K. Wajpamheros nourissati. *L. Coptodon zillii. *M. Oreochromis aureus. *N. O. mossambicus. *O. O. niloticus. *P. Parachromis managuensis. Photograph of T. socolofi is not included, (there is a photo of specimen in life published in Ceballos et al. (2016)).

opennotspecifiedAug 2022View details →
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FIGURE 2 in Diversity of Cichlid Fishes (Cichliformes: Cichlidae) in Chiapas, Mexico: A practical identification key with updated distribution maps

FIGURE 2. Cichlids that are distributed in Chiapas. A. Amphilophus trimaculatus. B. Astatheros macracanthus. C. Chiapaheros grammodes. D. Cincelichthys pearsei. E. Chuco intermedium. F. Cribroheros robertsoni. G. Kihnichthys ufermanni. H. Maskaheros argenteus. I. M. regani. J. Mayaheros urophthalmus. K. Oscura heterospila. L. Parachromis multifasciatus. M. Paraneetroplus gibbiceps. N. Petenia splendida. O. Rheoheros coeruleus. P. R. lentiginosus. Q. Rocio octofasciata. R. Theraps irregularis. Photograph of R. ocotal is not included (there is a photo of the fixed specimen in the original description proposed by Schmitter-Soto (2007a)).

opennotspecifiedAug 2022View details →
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FIGURE 2 in Characterization of the nutlet morpho-anatomical features of 12 Stachys taxa (Lamiaceae) from Turkey and its systematic practice

FIGURE 2. The micro-morphological structures of nutlets of the studied Stachys taxa; 7: S. viscosa var. viscosa, 8: S. viscosa var. odontophylla, 9: S. sivasica, 10: S. tundjeliensis, 11: S. laetivirens and 12: S. subnuda.

opennotspecifiedAug 2022View details →
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FIGURE 2 in Characterization of the nutlet morpho-anatomical features of 12 Stachys taxa (Lamiaceae) from Turkey and its systematic practice

FIGURE 2. The micro-morphological structures of nutlets of the studied Stachys taxa; 1: S. mardinensis, 2: S. megalodonta subsp. megalodonta, 3: S. megalodonta subsp. mardinensis, 4: S. baytopiorum, 5: S. benthamiana and 6: S. siirtensis.

opennotspecifiedAug 2022View details →
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FIGURE 1 in Characterization of the nutlet morpho-anatomical features of 12 Stachys taxa (Lamiaceae) from Turkey and its systematic practice

FIGURE 1. Nutlets of the studied Stachys taxa; 1: S. mardinensis, 2: S. megalodonta subsp. megalodonta, 3: S. megalodonta subsp. mardinensis, 4: S. baytopiorum, 5: S. benthamiana, 6: S. siirtensis, 7: S. viscosa var. viscosa, 8: S. viscosa var. odontophylla, 9: S. sivasica, 10: S. tundjeliensis, 11: S. laetivirens and 12: S. subnuda (The first picture is the dorsal surface, the second is the ventral surface for each taxon, Scale bars=1mm).

opennotspecifiedAug 2022View details →
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FIGURE 3 in Characterization of the nutlet morpho-anatomical features of 12 Stachys taxa (Lamiaceae) from Turkey and its systematic practice

FIGURE 3. The pericarp structures of nutlets of the studied Stachys taxa; 1: S. mardinensis, 2: S. megalodonta subsp. megalodonta, 3: S. megalodonta subsp. mardinensis, 4: S. baytopiorum, 5: S. benthamiana, 6: S. siirtensis, 7: S. viscosa var. viscosa, 8: S. viscosa var. odontophylla, 9: S. sivasica, 10: S. tundjeliensis, 11: S. laetivirens and 12: S. subnuda (ex= exocarp, me= mesocarp, nt= nonglandular trichome, c= crystal, en= endocarp, sr= scleranchymatic region, scale bars= 100 µm).

opennotspecifiedAug 2022View details →

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Allen Brain Atlas

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allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

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behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

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neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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