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855 results for “model system”
HCC-derived SNU cell lines as model systems to study HBV life cycle
GEO Series GSE298154. Homo sapiens. 13 samples. Type: Expression profiling by high throughput sequencing.
Whole organism snRNA-seq reveals systemic peripheral changes in Alzheimer’s Disease fly models
GEO Series GSE261656. Drosophila melanogaster. 28 samples. Type: Expression profiling by high throughput sequencing.
Phenotypic Plasticity in Aggressive Triple-Negative Breast Cancer: Human Biology is Recapitulated by a Novel Model System
GEO Series GSE33167. Homo sapiens. 15 samples. Type: Expression profiling by array.
A common epigenetic mechanism across different cellular origins underlies systemic immune dysregulation in an idiopathic autism mouse model
GEO Series GSE197618. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Overexpression of dn-p21ras as a model system for severe dilated cardiomyopathy
GEO Series GSE760. Mus musculus. 6 samples. Type: Expression profiling by array.
A systems approach identifies progeroid Ercc1[-/Δ] mice as a model system for kidney aging.
GEO Series GSE43061. Mus musculus. 21 samples. Type: Expression profiling by array.
Gene expression analysis in T cells from spleens of mice that provide a model for systemic lupus erythematosus
GEO Series GSE27591. Mus musculus; Homo sapiens. 48 samples. Type: Expression profiling by array.
TARGET: Cancer Model Systems (MDLS): Cell Lines and Xenografts (including PPTP)
As part of the TARGET initiative, some disease projects characterized tumor cell lines or xenografts, with or without matched normal comparators, as well as some normal non-involved tissues. MDLS includes acute leukemia cell lines and xenografts with matched primary and/or relapsed tumor information, neuroblastoma cell line and xenografts with matched controls, kidney tumor cell lines, normal brain tissues and embryonic stem cell lines. Additionally, in partnership with TARGET, 131 cell lines and xenografts from the NCI's Pediatric Preclinical Testing Program (now under the PIVOT program) received next generation sequencing of the whole exome.
A System Dynamics model of the rural socio-environmental system of the SW Messinia and Gialova lagoon
<p>This System Dynamics model describes interactions between different sectors of the rural social ecological system and the land sea interactions of Southwest Messinia and Gialova coastal lagoon, in Greece. The model allows simulation of the current situation as well as scenario projections and possible policy solutions identified through a participatory process with stakeholders from all involved sectors. Model output is presented as impacts on multiple Key Performance Indicators of sustainability including environmental, social and economic aspects. Through these simulations, the model aims to support integrated planning and better informed decision making.<br> The structure of the System Dynamics model was co-developed through a series of consecutive workshops with representatives from all sectors, which fostered shared learning and validation throughout the development process Throughout the participatory process which also included, expert interviews and questionnaires between 2018 and 2022, representatives from all sectors identified the main interactions between sectors and developed a vision for the area that could help stir the SW Messinia into a sustainable and resilient pathway. The Mental maps of the interactions between sectors that were developed during this participatory process formed the starting point for the System Dynamics model and can be found <a href="https://zenodo.org/record/7176064#.Y0MRHkxBxPZ">here</a>. </p>
Modeling the Impact of Secondary Ice Production on the Charge Structure of a Mesoscale Convective System: Dataset
<p>radar reflectivity image</p>
Human CD4 cytotoxic T lymphocytes mediate potent tumor control via tumor cell HLA 2 class II expression in a humanized immune system mouse model
GEO Series GSE223026. Homo sapiens; Mus musculus. 22 samples. Type: Expression profiling by high throughput sequencing.
Matlab code associated with publication "Mathematical model of the multi-amino acid multi-transporter system predicts uptake flux in CHO cells"
<p>Matlab code associated with publication "Mathematical model of the multi-amino acid multi-transporter system predicts uptake flux in CHO cells" </p> <p>Published version : Ashley Sreejan, Mugdha Gadgil, Chetan J. Gadgil, Mathematical model of the multi-amino acid multi-transporter system predicts uptake flux in CHO cells, Journal of Biotechnology, Volume 344, 2022, Pages 40-49, ISSN 0168-1656</p> <p>Published version available at https://doi.org/10.1016/j.jbiotec.2021.12.003</p> <p>One version of the manuscript is available at doi:10.1101/2021.04.26.441392</p>
Measured data presented in: Domes and Semi-Capsules as Model Systems for Infrared Microspectroscopy of Biological Cells
<p>The data is the measured presented in the article: Domes and Semi-Capsules as Model Systems for Infrared Microspectroscopy of Biological Cells.</p> <p>It contains the following:</p> <ul> <li>Measured spectra and AFM measurement of lung cancer cell</li> <li>Matrigle spectra</li> <li>Measured spectra of 3D printed samples</li> </ul>
The molecular raw data of microbial communities associated with fish gut - in vitro model system using 16S rRNA Illumina amplicon sequencing approach.
<p>This data on the microbial communities and its diversity associated with fish gut. The samples were obtained from fish gut - in vitro model system using 16S rRNA Illumina amplicon sequencing approach.</p>
TARGET: Cancer Model Systems (MDLS): Cell Lines and Xenografts (including PPTP)
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.