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2,063
datasets available to search
ShareScore release 0.9.0
Dataset results
2,063 results for “single cell transcriptomics”
Single-cell transcriptomic profiles of CD45-positive cells from Mx1-Cre x Adam10f/f Rag2KO mice
GEO Series GSE180405. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Rapid nutritional regulation of oligodendrocytes of the adult hypothalamic median eminence revealed by single-cell transcriptomic analysis
GEO Series GSE133890. Mus musculus. 32 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptomic data from MGE-derived interneurons purified from postnatal day 18-21 frontal cortex and hippocampus of wild type and MGE-specific GRIN1-knockout mice.
GEO Series GSE156201. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptome profiling for hidradenitis suppurativa
GEO Series GSE154775. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome profiling of single HEK293 cells with UMIs sequenced on Ion Torrent Proton (Run 20151215)
GEO Series GSE79130. Homo sapiens. 47 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic atlas of human donor muscle tissue
GEO Series GSE143704. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Single-cell Transcriptome Analysis of Chronic Antibody-mediated Rejection after Renal Transplantation
GEO Series GSE190329. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptome for three Drosophila intestinal derived cell lines
GEO Series GSE295099. Drosophila melanogaster. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome analysis reveals T-cell exhaustion in denosumab-treated giant cell tumor of bone
GEO Series GSE212341. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Cross-species single-cell transcriptomic analysis reveals divergence of cell composition and functions in mammalian ileum epithelium [scRNA-seq_Macaque]
GEO Series GSE196658. Macaca mulatta. 1 samples. Type: Expression profiling by high throughput sequencing.
Tracing the temporal-spatial transcriptomic landscapes of the human fetal digestive tract by single cell RNA-seq analysis [adult tissues]
GEO Series GSE103154. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.
Single-cell nuclear transcriptome sequencing and cross-species analysis reveal tree shrew retina Age-associated cellular profiles and specific markers
GEO Series GSE227524. Tupaia belangeri. 15 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptomics reveals opioid usage evokes widespread suppression of antiviral gene program
GEO Series GSE128879. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Common Mitochondrial Deletions in RNA-Seq: Evaluation of Bulk, Single-Cell and Spatial Transcriptomic Datasets
GEO Series GSE226663. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing; Other.
Single cell transcriptome of ESCs upon MLL1 inhibition/deletion
GEO Series GSE127943. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic profile at single cell level of splenic NK cells from Reg-1fl/fl and Reg-1ΔNK mice [CITE-Seq]
GEO Series GSE237639. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-Cell Transcriptomics and Fate Mapping of Ependymal Cells Reveals an Absence of Neural Stem Cell Function
GEO Series GSE100320. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics of spinal microglia from Cx3cr1-Cre-YFP x flxRunx1 mice
GEO Series GSE123064. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell Transcriptome Landscape and Cell Fate Decoding in Human Brain Organoids after Transplantation
GEO Series GSE243015. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics and in vitro lineage tracing reveals differential susceptibility of human iPSC-derived midbrain dopaminergic neurons in a cellular model of Parkinson’s disease.
GEO Series GSE249360. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.