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1,353
datasets available to search
ShareScore release 0.9.0
Dataset results
1,353 results for “single-cell transcriptomics”
Single-cell transcriptomics of human intestinal organoids infected with SARS-CoV-2
GEO Series GSE156760. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockad
GEO Series GSE300288. Mus musculus. 31 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome analysis of CD3+ T lymphocytes from prurigo nodularis lesional skin reveals Th17 polarization
GEO Series GSE213849. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic atlas reveals tissue architecture and deciphers pathological reprogramming during retinal ischemia in Macaca fascicularis
GEO Series GSE242229. Macaca fascicularis. 2 samples. Type: Expression profiling by high throughput sequencing.
Integrative single-cell and spatial transcriptomic analyses identify a pathogenic cholangiocyte niche and TNFRSF12A as therapeutic target for biliary atresia
GEO Series GSE176189. Homo sapiens. 36 samples. Type: Expression profiling by high throughput sequencing; Other.
SSN-seq: Multiplexed single-cell transcriptomic profiling via genetic barcoding with shielded small nucleotides
GEO Series GSE201647. Homo sapiens; Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell characterization of transcriptomic heterogeneity in lymphoblastoid cell lines
GEO Series GSE158275. human gammaherpesvirus 4; Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptomics of Epstein-Barr Virus and Human Herpesvirus 6 Coinfection
GEO Series GSE230239. human gammaherpesvirus 4; Human betaherpesvirus 6B; Homo sapiens; Human betaherpesvirus 6A. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis of the adult mouse spinal cord reveals fundamental molecular diversity of autonomic and skeletal motor neurons
GEO Series GSE161621. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Identification of genomic enhancers through spatial integration of single-cell transcriptomics and epigenomics [ATACseq]
GEO Series GSE141573. Drosophila melanogaster. 29 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell transcriptomics of adult gd T-cell lineage commitment highlights its TCR-instructive nature II
GEO Series GSE184544. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Next Generation Sequencing analysis at single-cell level of normal and degenerated nucleus pulposus cells transcriptomes
GEO Series GSE167931. Homo sapiens. 9 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Single-Cell Transcriptomic Analysis of Cellular Composition and Signaling Pathways in Cerebral Cavernous Malformation
GEO Series GSE294555. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptomic Analysis of Human Lung Reveals Complex Multicellular Changes During Pulmonary Fibrosis II
GEO Series GSE122960. Homo sapiens. 17 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic landscape reveals the differences in cell differentiation and immune microenvironment of papillary thyroid carcinoma between male and female patients
GEO Series GSE158291. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome atlas of mammalian hair cells uncovers the molecular mechanisms underlying tonotopic differences
GEO Series GSE194089. Mus musculus. 139 samples. Type: Expression profiling by high throughput sequencing.
Multiplexed single-cell transcriptomics reveals diverse phenotypic outcomes for pathogenic SHP2 variants
GEO Series GSE300865. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptomics Reveals FXR1 as an Actionable Target for siRNA Therapy in Ovarian Cancer
GEO Series GSE292799. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell analysis of adipose tissue T cells in diabetic persons with HIV reveals high proportions of clonally expanded CMV-like CD4+ T cells with cytotoxic RNA transcriptomes
GEO Series GSE159759. Homo sapiens. 69 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome analysis reveals subtype-specific clonal evolution and microenvironmental changes in liver metastasis of pancreatic adenocarcinoma and their clinical implications
GEO Series GSE263733. Homo sapiens. 218 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.