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1,491
datasets available to search
ShareScore release 0.9.0
Dataset results
1,491 results for “Ione”
Response of ECF sigma factor deletion mutants of Cupriavidus metallidurans to mixed metal ions (Co, Cu, Cd, Zn, Ni, 30 µM each)
GEO Series GSE115771. Cupriavidus metallidurans; Cupriavidus metallidurans CH34. 16 samples. Type: Expression profiling by array.
Multiscale profiling of tyrosine kinase inhibitor cardiotoxicity reveals mechanosensitive ion channel PIEZO1 as cardioprotective [bulk RNA-seq]
GEO Series GSE309795. Homo sapiens. 72 samples. Type: Expression profiling by high throughput sequencing.
A comparison of Illumina and Ion Torrent sequencing platforms in the context of differential gene expression
GEO Series GSE98562. Mus musculus. 20 samples. Type: Expression profiling by high throughput sequencing.
Ion transport and osmotic adjustment in E. coli in response to ionic and non-ionic osmotica
GEO Series GSE12190. Escherichia coli. 6 samples. Type: Expression profiling by array.
Potassium ion homeostasis modulates mitochondrial function I
GEO Series GSE314779. Saccharomyces cerevisiae. 6 samples. Type: Expression profiling by high throughput sequencing.
A novel peptide hydrogel of metal ion clusters for accelerating bone defect regeneration
GEO Series GSE212279. Rattus norvegicus. 9 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome analysis of Bacillus cereus B3711 during silver ion stress condition
GEO Series GSE26043. Bacillus cereus. 8 samples. Type: Expression profiling by array.
Potential toxicity of inorganic ions in the particulate matter: ion permeation in lung and disruption of cell metabolism
GEO Series GSE182629. Homo sapiens; Mus musculus. 42 samples. Type: Expression profiling by high throughput sequencing.
Efficient Identification of Multiple Pathways: RNA-Seq Analysis of Livers from 56Fe Ion Irradiated Mice
GEO Series GSE136165. Mus musculus. 30 samples. Type: Expression profiling by high throughput sequencing.
Kidney Hypothermic Perfusion with Mesenchymal Stromal Cells or Microvesicles Protects Rat Kidney from Ischemia By Upregulation of Cell Energy Metabolism and Ion Membrane Transport Key Genes
GEO Series GSE84563. Rattus norvegicus. 9 samples. Type: Expression profiling by array.
NRSF mediated epigenetic mechanisms of ion channel dysfunction in experimental temporal lobe epilepsy [Control vs. Kainate, NRSE ODNs]
GEO Series GSE22894. Rattus norvegicus. 8 samples. Type: Expression profiling by array.
Toxin-mediated downregulation of absorptive ion transporters NHE3, DRA, and SGLT1 in the colon contributes to diarrhea associated with Clostridioides difficile infection.
GEO Series GSE216919. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.
LET-dependent change in rice gene expression profile after heavy-ion beam irradiation [LET]
GEO Series GSE78994. Oryza sativa. 18 samples. Type: Expression profiling by array.
Supplementary data for: "The Venusian atmospheric oxygen ion escape: Extrapolation to the early Solar System"
<p>Supplementary data for paper "The Venusian atmospheric oxygen ion escape: Extrapolation to the early Solar System", submitted to Journal of Geophysical Research: Planets. See README file for description of the data in each file.</p>
Molecular absorption and evolution mechanisms of PM2.5 brown carbon revealed by electrospray ionization -Fourier-transform ion cyclotron resonance mass spectrometry during a severe winter pollution episode in Xi'an, China
<p>42 PM<sub>2<em>.</em>5</sub> samples were collected during a severe pollution episode in January 2017 over Xi’an, China for a comprehensive non-target and full scanning of Brown carbon molecules and their absorption properties using electrospray ionization–Fourier-transform ion cyclotron resonance mass spectrometry(FTICRMS). Here are the data sets of FTICRMS intensity, formula, organic carbon (OC) and absorption at 365nm of the 42 samples.</p>
One Ion, Many Facets: Efficient, Structurally and Thermally Sensitive Luminescence of Eu2+ in Binary and Ternary Strontium Borohydride Chlorides
<p>Dataset accompanying figures published in the publication DOI: 10.5281/zenodo.3748961</p>
Movie of metal ion cross-linked glycerol gels aged at different relative humidities
<p>Movie of metal ion cross-linked glycerol gels aged at different relative humidities (2x speed). See Seth Cazzell's 2020 MIT Thesis "Engineering gelation in metal ion cross-linked hydrogels."</p>
Inputs to calculate the solvation free energies of ECC ions in SPCE water
<p>Scripts and input files for the calculation of the solvation free energies of selected cations with the ECC model. The simulation box contains one cation and 800 water molecules. The ion topologies are from https://bitbucket.org/hseara/ions. Notably, before comparison with experimental values, the electronic solvation free energy contribution must be added to the result [1], as well as the correction due to the use of neutralizing charge density [2].</p> <p>In each folder, ./run.sh creates the folders representing different lambda values in the free energy perturbation approach and performs the respective calculation in each folder. There are a total of 31 windows (11 for electrostatics and 20 for Lennard-Jones). After running the script, the free energy can be extracted by</p> <p>gmx bar -f ?/md.xvg ??/md.xvg -temp 298 -o -b 100</p> <p>The results are reported in DOI: [ADD]</p> <p>[1] DOI: 10.1021/ct9005807</p> <p>[2] DOI: 10.1080/08927022.2015.1121544</p>
Simulations of the air-water interface at the presence of salt, ECC ions + OPC water model
<p>Simulations of a water–air interface. There are ~20000 water molecules with various concentrations of NaCl or CaCl_2 in a simulation box of 12*12*22 nm^3. The 4-point OPC water and the ions with scaled charges based on the electronic continuum correction (ECC) are used. The numbering in file names corresponds to the different concentrations. GROMACS-compatible inputs are provided: simulation parameters (md.mdp), topologies (top), and index (ndx) files. Initial structure can be extracted from the tpr file using gmx editconf. The run input (tpr) is provided, as are the outputs: energy file (edr), trajectory (xtc), and final structure (gro). Surface tensions can be extracted by gmx energy.</p> <p>These values are reported in DOI: [ADD].</p> <p>Data for these ECC ions with SPCE water is provided at DOI: 10.5281/zenodo.3888383 and for the full charge ions by Dang et al. in SPCE water at DOI: 10.5281/zenodo.3888436 .</p>
On the ion distributions at the separatrices during symmetric magnetic reconnection
<p>Simulation data used in the paper "On the ion distributions at the separatrices during symmetric magnetic reconnection", submitted to Physics of Plasmas.</p> <p>The directory contains the input file, output data and post-processing script from running iPIC3D for investigating the ion dynamics on the separatrices in magnetic reconnection, while the code iPIC3D is available on <a href="https://bitbucket.org/bopkth/ipic3d-klm">https://bitbucket.org/bopkth/ipic3d-klm</a>.</p> <p>The data of fields and current can be read through "post-processing.py". For data of particles, there are files describing the data format in each directory.</p> <p>The details are described in the paper.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.