Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

2,614

datasets available to search

ShareScore release 0.9.0

Reset

Dataset results

2,614 results for “RNA-seq analysis”

Learn how ShareScore rates datasets ↗
geo24/100

RNA-seq analysis of gene transcripts during callus formation from the basal part of young rice leaf explants

GEO Series GSE86869. Oryza sativa Japonica Group. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2016View details →
geo24/100

Time course analysis of the effect of embedded metal on skeletal muscle gene expression [RNA-seq]

GEO Series GSE157929. Rattus norvegicus. 150 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2020View details →
geo24/100

Temporal RNA-seq analysis of human skeletal myotubes synchronized in vitro

GEO Series GSE109825. Homo sapiens. 100 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2018View details →
geo24/100

Single cell RNA-seq analysis of novel splenic DC

GEO Series GSE158200. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenDec 2021View details →
geo24/100

RNA-Seq analysis comparing transcriptome of MYB117 overexpression transgenic and wild hybrid poplar grown in the greenhouse

GEO Series GSE165376. Populus tremula x Populus tremuloides. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2021View details →
geo24/100

Single cell RNA-seq analysis of feeder-free iPSC-derived gliogenic NS/PCs and neurogenic NS/PCs

GEO Series GSE138302. Homo sapiens. 241 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2020View details →
geo24/100

RNA-Seq analysis on the liver of mice treated with high-fat diet and liraglutide

GEO Series GSE168937. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2021View details →
geo24/100

RNA-seq analysis of Escherichia coli str. K-12 substr. MG1655

GEO Series GSE45443. Escherichia coli str. K-12 substr. MG1655. 54 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2013View details →
geo24/100

Bulk RNA-seq analysis of the macrophage response to Salmonella enterica subsp. Typhimurium (SL1344) exposure

GEO Series GSE65530. Mus musculus. 20 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2015View details →
geo24/100

Functional Genomics and Tumor Microenvironment Analysis Reveal Prognostic Biological Subtypes in Mantle Cell Lymphoma [RNA-seq]

GEO Series GSE271664. Homo sapiens. 51 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2025View details →
geo24/100

RNA-seq analysis after MIR4435-2HG knockdown in HemECs

GEO Series GSE236203. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2023View details →
geo24/100

RNA-seq analysis of mammary tissue reveals persistent changes in gene expression profiles dependent upon the level of folic acid intake in C56BL/6 mice.

GEO Series GSE153732. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2020View details →
geo24/100

RNA-seq analysis of mouse hearts over-expressing PTBP1 using an AAV9 vector

GEO Series GSE150831. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2022View details →
geo24/100

RNA-Seq analysis of mouse small intestine enteroendocrine cells

GEO Series GSE61250. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2015View details →
geo24/100

RNA-Seq: assessment of transcript level analysis tools [seq]

GEO Series GSE71802. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2016View details →
geo24/100

Analysis of the transcriptome and DNA methylome in response to acute and recurrent low glucose in human primary astrocytes (RNA-Seq)

GEO Series GSE166847. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2021View details →
geo24/100

Application of RNA-seq for single nucleotide variation identification patients with hereditary diseases: analysis of trasncriptomic data and perspective use

GEO Series GSE273325. Homo sapiens. 54 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2025View details →
geo24/100

Comparative analysis of cellular heterogeneity in the LAM lung using bulk RNA-seq and scRNA-seq

GEO Series GSE139819. Homo sapiens; Mus musculus. 34 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2020View details →
geo24/100

Analysis of the bovine monocyte-derived macrophage response to Mycobacterium avium subspecies paratuberculosis infection using RNA-seq

GEO Series GSE62048. Bos taurus. 35 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2015View details →
geo24/100

RNA-Seq analysis identifies to GATA3-AS1 as a lncRNA associated with resistance to neoadjuvant chemotherapy in locally advanced breast cancer patients

GEO Series GSE159448. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2021View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record