Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
5,436
datasets available to search
ShareScore release 0.9.0
Dataset results
5,436 results for “phylogenetic species”
Fig. 9 in Phylogenetic and morphological analysis of Gloydius himalayanus (Serpentes, Viperidae, Crotalinae), with the description of a new species
Fig. 9. The habitat of Gloydius chambensis sp. nov. in Chamba District, Himachal Pradesh, India (elevation = 1700 m). Photo by V. Santra.
Fig. 8 in Phylogenetic and morphological analysis of Gloydius himalayanus (Serpentes, Viperidae, Crotalinae), with the description of a new species
Fig. 8. Gloydius himalayanus (Günther, 1864). a–c. Male specimen (Great Himalayan National Park, Himachal Pradesh, India; Specimen Number: 18.30). a. Whole body. b–c. Close-up views of the dorsal (b) and lateral (c) head. d. Specimen 17.v03 (Palampur, Kangra), whole body in-situ. Photos provided by J.B. Owens and V. Santra.
Fig. 10 in Phylogenetic and morphological analysis of Gloydius himalayanus (Serpentes, Viperidae, Crotalinae), with the description of a new species
Fig. 10. Examples of bites from Gloydius chambensis sp. nov. a. Female victim bitten on the little toe of her left foot, while walking through long grass to collect drinking water, with visible swelling. b–c. Elderly woman, bitten on the ring finger of her right hand while cutting long grass for cattle fodder, with swelling, localized pain, and tenderness immediately after the bite. After 24 hours, there were signs of infection at the bite site with reduced swelling. The substances on the leg of the first victim and the white substance on the hand of the second victim were applied by a local faith healer.
FIG. 5. — Rhytidhysteron subrufulum X.-L in Multigene phylogenetic support for novel Rhytidhysteron Speg. species (Hysteriaceae) from Sichuan Province, China
FIG. 5. — Rhytidhysteron subrufulum X.-L. Xu & C.-L. Yang, sp. nov. (holo-, SICAU19-0010): A, appearance of apothecia on host; B, C, ascomata; D, vertical section of hysteriothecium; E, exciple; F, G, pseudoparaphyses; H-M, asci; N, ocular chamber; O-S, ascospores; T, germinated ascospores; U, colonies on PDA for five days. Scale bars: A, 1 mm; B, C, 0.5 mm; D, 200 μm; E, 50 μm; F-M, 20 μm; N-T, 10 μm.
FIG. 4. — Rhytidhysteron sichuanensis X.-L in Multigene phylogenetic support for novel Rhytidhysteron Speg. species (Hysteriaceae) from Sichuan Province, China
FIG. 4. — Rhytidhysteron sichuanensis X.-L. Xu & C.-L. Yang, sp. nov. (holo-, SICAU 19-0004): A, appearance of apothecia on host; B, C, ascomata; D, vertical section of hysteriothecium; E, exciple; F, pseudoparaphyses; G-K, asci; L, ocular chamber; M-P, ascospores; Q, germinated ascospores; R, colonies on PDA for six days. Scale bars: A, B, 1 mm; C, 0.5 mm; D, 200 μm; E-K, 20 μm; L-Q, 10 μm.
FIG. 3. — Rhytidhysteron ligustrum X.-L in Multigene phylogenetic support for novel Rhytidhysteron Speg. species (Hysteriaceae) from Sichuan Province, China
FIG. 3. — Rhytidhysteron ligustrum X.-L. Xu & C.-L. Yang, sp. nov. (holo-, SICAU 20-0004): A, appearance of apothecia on host; B, C, ascomata; D, vertical section of hysteriothecium; E, exciple; F, pseudoparaphyses; G-K, asci; L, ocular chamber; M, germinated ascospores; N-Q, ascospores; R, colonies on PDA for five days. Scale bars: A, 1 mm; B, C, 0.5 mm; D, 100 μm; E-K, 20 μm; L-Q, 10 μm.
FIG. 1 in Multigene phylogenetic support for novel Rhytidhysteron Speg. species (Hysteriaceae) from Sichuan Province, China
FIG. 1. — Phylogram generated from RAxML analyses based on combined LSU, SSU, ITS and tef-1α sequence dataset within the genus Rhytidhysteron Speg. The tree is rooted to Hysterographium fraxini (Pers.) De Not. (CBS 109.43 and MFLU 15-3681). ML ≥70% and BYPP ≥0.95 are defined as ML/BYPP above or below the nodes. The type strains are in bold and the newly generated sequences are highlighted in red.
FIG. 2 in Multigene phylogenetic support for novel Rhytidhysteron Speg. species (Hysteriaceae) from Sichuan Province, China
FIG. 2. — Rhytidhysteron hongheense Wanas (SICAU 19-0006): A, appearance of apothecia on host; B, C, ascomata; D, vertical section of hysteriothecium; E, F, exciple; G, pseudoparaphyses; H-K, asci; L, M, ocular chamber; N-P, ascospores; Q, germinated ascospores; R, colonies on PDA for four days. Scale bars: A, B, 1 mm; C, 0.5 mm; D, 200 μm; E-K, 20 μm; L-Q, 10 μm.
FIG. 6 in Septonema lohmanii G. Delgado & O. Koukol, sp. nov., a new species in Mytilinidiales (Dothideomycetes) and the phylogenetic position of S. fasciculare (Corda) S. Hughes
FIG. 6. — Septonema fasciculare (Corda) S. Hughes (MUCL 8886) in culture (MEA): A, colonies after 1 month. Herbarium specimen; B, colonies on natural substrate; C, D, conidiophores, conidiogenous cells and conidia; E, F, conidia. Ibid. (IMI 84944a); G, colonies on natural substrate; H, J, conidia; I, conidiophores, conidiogenous cells and conidia. Septonema secedens (IMI 9939); K, colonies on natural substrate. L, M, conidia. Ibid. (IMI 25538a); N, conidiophore, branches and conidia. Scale bars: B, G, 200 μm; K, 500 μm; C-F, H-J, L-M, 10 μm; N, 20 μm.
FIG. 5 in Septonema lohmanii G. Delgado & O. Koukol, sp. nov., a new species in Mytilinidiales (Dothideomycetes) and the phylogenetic position of S. fasciculare (Corda) S. Hughes
FIG. 5. — Septonema fasciculare (Corda) S. Hughes (MUCL 8886, herbarium specimen): A, conidiophores, ramoconidia and conidia in chains; B, conidia. Scale bar: 20 μm.
FIG. 3. — Septonema lohmanii G. Delgado & O in Septonema lohmanii G. Delgado & O. Koukol, sp. nov., a new species in Mytilinidiales (Dothideomycetes) and the phylogenetic position of S. fasciculare (Corda) S. Hughes
FIG. 3. — Septonema lohmanii G. Delgado & O. Koukol,sp.nov.(BPI 910175, holotype = CBS 141174).On natural substrate:A, conidiophores,branches and conidia.In culture (MEA); B, colony after 21 days; C, D, conidiophores,branches and conidia; E, hyphal segment showing warts.Ibid. (PRC 4117,paratype); F, colony on natural substrate; G, conidiophores, branches and conidia; H, conidia. Scale bars: A, 20 μm; C-E, G-H, 10 μm; F, 200 µm.
FIG. 2. — Septonema lohmanii G. Delgado & O in Septonema lohmanii G. Delgado & O. Koukol, sp. nov., a new species in Mytilinidiales (Dothideomycetes) and the phylogenetic position of S. fasciculare (Corda) S. Hughes
FIG. 2. — Septonema lohmanii G. Delgado & O. Koukol, sp. nov. (BPI 910175, holotype): A, conidiophores, branches and conidia; B, acute apices of young co- nidiophores and branches. Scale bars: 20 μm.
FIG. 4 in Septonema lohmanii G. Delgado & O. Koukol, sp. nov., a new species in Mytilinidiales (Dothideomycetes) and the phylogenetic position of S. fasciculare (Corda) S. Hughes
FIG. 4. — Phylogenetic tree inferred from Bayesian and ML analyses of concatenated ITS-LSU sequence data showing the placement of Septonema fasciculare (Corda) S. Hughes within the family Venturiaceae (Venturiales, Dothideomycetes). Numbers above branches represent Bayesian posterior probabilities PP>0.95 followed by ML bootstrap support values BS≥90 %. The studied strain MUCL 8886 is highlighted in bold.
FIG. 1 in Septonema lohmanii G. Delgado & O. Koukol, sp. nov., a new species in Mytilinidiales (Dothideomycetes) and the phylogenetic position of S. fasciculare (Corda) S. Hughes
FIG. 1. — Phylogenetic tree inferred from Bayesian and ML analyses of concatenated LSU-EF1-α sequence data showing the placement of Septonema lohmanii G. Delgado & O. Koukol, sp. nov. within Mytilinidiales and related orders in Dothideomycetes. Numbers above branches represent Bayesian posterior probabilities PP>0.95 followed by ML bootstrap support values BS≥90%. Strains belonging to the new taxon are highlighted in bold.
FIG. 11. — Russula shoreae D.Chakr., A.Ghosh, K in Three new species of genus Russula Pers. from Sal dominated forests of tropical India based on morphotaxonomy and multigene phylogenetic analysis
FIG. 11. — Russula shoreae D.Chakr., A.Ghosh, K.Das & Buyck, sp. nov. (from holotype): A-C, fresh and dissected basidiomata in the field and basecamp; D, E, transverse section through pileipellis showing elements; F, transverse section through lamellae showing basidia; G, H, transverse section through lamellae showing hymenial cystidia near the lamellae edges; I-M, transverse section through lamellae showing hymenial cystidia near the lamellae sides. Scale bars: A, B, 20 mm; D, 20 μm; E-M, 10 μm.
FIG. 9. — Russula pseudoflavida A in Three new species of genus Russula Pers. from Sal dominated forests of tropical India based on morphotaxonomy and multigene phylogenetic analysis
FIG. 9. — Russula pseudoflavida A.Ghosh, Hembrom, I.Bera & Buyck, sp. nov. (from holotype): A, basidiospore; B, basidia; C, hymenial gloeocystidia near the lamellae edges; D, hymenial gloeocystidia near the lamellae sides; E, marginal cells; F, elements of the pileipellis near the pileus margin: hyphal terminations; G, elements of the pileipellis near the pileus centre: hyphal terminations; H, doubtfull primordial hyphae. Scale bars: 10 µm.
FIG. 4 in Three new species of genus Russula Pers. from Sal dominated forests of tropical India based on morphotaxonomy and multigene phylogenetic analysis
FIG. 4. — Phylogram generated by Maximum Likelihood analysis based on nrITS sequence data of Russula boddingii Hembrom, D.Chakr., A.Ghosh & K.Das, sp. nov. and allied species. Maximum Likelihood bootstrap support values (MLbs) ≥ 70% are shown on the left of "/" and Bayesian Posterior Probabilities (BPP) ≥ 0.95 are shown on the right above or below the branches at nodes. Russula boddingii Hembrom, D.Chakr., A.Ghosh & K.Das, sp. nov. is placed in red font to highlight its phylogenetic position in the tree.
FIG. 2 in Three new species of genus Russula Pers. from Sal dominated forests of tropical India based on morphotaxonomy and multigene phylogenetic analysis
FIG. 2. — SEM micrographs of basidiospores: A, B, Russula boddingii Hembrom, D.Chakr., A.Ghosh & K.Das, sp. nov.; C, D, R. pseudoflavida A.Ghosh, Hembrom, I.Bera & Buyck, sp. nov.; E, F, R. shoreae D.Chakr., A.Ghosh, K.Das & Buyck, sp. nov. Scale bars: A-C, E, F, 2 μm; D, 1 μm.
FIG. 6 in Three new species of genus Russula Pers. from Sal dominated forests of tropical India based on morphotaxonomy and multigene phylogenetic analysis
FIG. 6. — Russula boddingii Hembrom, D.Chakr., A.Ghosh & K.Das, sp. nov. (from holotype): A, basidiospore; B, hymenial gloeocystidia near the lamellae edges; C, elements of the pileipellis near the pileus centre: hyphal terminations; D, basidia; E, hymenial gloeocystidia near the lamellae sides; F, elements of the pileipellis near the pileus margin: hyphal terminations. Scale bars: 10 µm.
FIG. 8. — Russula pseudoflavida A in Three new species of genus Russula Pers. from Sal dominated forests of tropical India based on morphotaxonomy and multigene phylogenetic analysis
FIG. 8. — Russula pseudoflavida A.Ghosh, Hembrom, I.Bera & Buyck, sp. nov. (from holotype): A-C, fresh and dissected basidiomata in the field and basecamp; D-F, transverse section through pileipellis showing elements; G, primordial hyphae in carbolfuchsine; H-J, transverse section through lamellae showing hymenial gloeocystidia near the lamellae sides; K, transverse section through lamellae showing hymenial gloeocystidia near the lamellae edges. Scale bars: A, B, 20 mm; D, E, G, 20 μm; F, H-K, 10 μm.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.