Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
2,063
datasets available to search
ShareScore release 0.9.0
Dataset results
2,063 results for “single cell transcriptomics”
Single cell transcriptomic representation of social dominance in prefrontal cortex and the influence of preweaning maternal and postweaning social environment
GEO Series GSE234726. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptome atlas of microenvironment in preovulation follicle
GEO Series GSE189960. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptomic analysis of human axioloids
GEO Series GSE199571. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptome analysis of distal adult murine lung airway epithelium
GEO Series GSE129937. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-nucleus transcriptomics of epicardial adipose tissue from female pigs reveals effects of exercise training on resident innate and adaptive immune cells
GEO Series GSE246709. Sus scrofa. 11 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome Atlas reveals protective characteristics of COVID-19 mRNA vaccine [bulk RNA-seq]
GEO Series GSE209615. Macaca mulatta. 7 samples. Type: Expression profiling by high throughput sequencing.
RNA-seq of Single-Cell Genotyping of Transcriptomes
GEO Series GSE117824. Homo sapiens; Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Standard and targeted single-cell transcriptomics of CD8+ T cell samples and targeted single-cell transcriptomics of B cell samples for systematic analysis
GEO Series GSE223704. Homo sapiens. 24 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics of Osr1 positive cells from mouse second heart field
GEO Series GSE309215. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
single cell transcriptome analysis of regulated transgenic GATA1 expression as a gene therapy for Diamond-Blackfan anemia
GEO Series GSE261450. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome profiling of mouse bone marrow-derived immune cells in response to trypanosome infection
GEO Series GSE234000. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Defining the Regulatory Logic of Breast Cancer Using Single-Cell Epigenetic and Transcriptome Profiling
GEO Series GSE243526. Homo sapiens. 40 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Transcriptomic dissection of an appendicularian larva at single cell resolution
GEO Series GSE255976. Oikopleura dioica. 19 samples. Type: Expression profiling by high throughput sequencing.
Single-cell joint analysis of DNA oxidative damage and transcriptome [Hela paired damage]
GEO Series GSE268554. Homo sapiens. 4 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing.
Single cell RNA analysis of the left-right organizer transcriptome reveals potential novel heterotaxy genes
GEO Series GSE212459. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Precursors of human CD4+ cytotoxic T lymphocytes identified by single-cell transcriptome analysis [scRNA-seq]
GEO Series GSE106540. Homo sapiens. 2244 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptomics of human and mouse lung cancers reveals conserved myeloid populations across individuals and species
GEO Series GSE127465. Homo sapiens; Mus musculus. 40 samples. Type: Expression profiling by high throughput sequencing.
Co-profiling of in situ RNA-protein interactions and transcriptome in single cells and tissues
GEO Series GSE278418. Mus musculus; Homo sapiens. 278 samples. Type: Expression profiling by high throughput sequencing; Other.
Comparative Single Cell Transcriptome Analysis of c-Met Receptor Expressing and Non-Expressing Projection Neurons in the Developing Frontal and Visual Cortices
GEO Series GSE276009. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptomics Links Loss of Human Pancreatic β-Cell Identity to ER Stress
GEO Series GSE263565. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.