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2,063
datasets available to search
ShareScore release 0.9.0
Dataset results
2,063 results for “single cell transcriptomics”
Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.
GEO Series GSE266969. Mus musculus. 13 samples. Type: Other.
Single-cell transcriptomic landscapes of the otic neuronal lineage at multiple early embryonic ages
GEO Series GSE178931. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Spatially resolved single-cell analysis uncovers protein kinase Cδ-expressing microglia with anti-tumor activity in glioblastoma [Spatial Transcriptomics]
GEO Series GSE298689. Mus musculus. 1 samples. Type: Other.
devCellPy: A machine learning-enabled pipeline for automated annotation of complex multilayered single-cell transcriptomic data
GEO Series GSE184943. Homo sapiens; Mus musculus. 1186 samples. Type: Expression profiling by high throughput sequencing.
SUGAR-Seq enables simultaneous detection of glycans, epitopes and the transcriptome in single cells [3'RNA-seq]
GEO Series GSE166323. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
A single-cell transcriptomic analysis reveals precise pathways and regulatory mechanisms underlying hepatoblast differentiation
GEO Series GSE90047. Mus musculus. 547 samples. Type: Expression profiling by high throughput sequencing.
Single Nuclei Transcriptomics Delineates Complex Interactions Between Immune and Renal Cells Contributing to Kidney Graft Fibrosis
GEO Series GSE195718. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic and anatomic parcellation of 5-HT3AR expressing cortical interneuron subtypes revealed by single-cell RNA sequencing
GEO Series GSE90860. Mus musculus. 223 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome profiling reveals diverse immune cell populations and their responses to viral infection in the spleen of zebrafish
GEO Series GSE211396. Danio rerio. 3 samples. Type: Expression profiling by high throughput sequencing.
Systematic mapping of cell state trajectories, cell lineage, and perturbations in the zebrafish embryo using single cell transcriptomics
GEO Series GSE112294. Danio rerio. 18 samples. Type: Expression profiling by high throughput sequencing.
Joint single-cell transcriptomics and epigenomics analysis reveal key regulators of CAR T cell stemness and antitumor immunity
GEO Series GSE202543. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-Cell Transcriptomics Identifies TOX as a Key Transcriptional Regulator of Progenitor-Like CD8 T Cells in Chronic Infection [RNA-seq]
GEO Series GSE119942. Mus musculus. 34 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptome Analysis Maps the Developmental Track of the Human Heart
GEO Series GSE106118. Homo sapiens. 98 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomes combining with consecutive genomics reveal clonal evolution and gene regulatory networks in relapsed and refractory multiple myeloma
GEO Series GSE188632. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics - scRNAseq v3 with cell multiplexing
GEO Series GSE260800. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell RNA Sequencing and Spatial Transcriptomics Reveal Unique Subpopulations of Infiltrating Macrophages and Dendritic Cells Following AKI
GEO Series GSE289933. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing; Other.
Single cell transcriptomics defines human islet cell signatures and reveals cell-type-specific expression changes in type 2 diabetes [single cell]
GEO Series GSE86469. Homo sapiens. 638 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome analysis reveals CD34 as a marker of human sinoatrial node pacemaker cardiomyocytes [CITE-seq]
GEO Series GSE279632. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell Transcriptomics Reveals the Divergent Developmental Lineage Trajectories during Human Pituitary Development
GEO Series GSE142653. Homo sapiens. 89 samples. Type: Expression profiling by high throughput sequencing.
Integration of spatial and single cell transcriptomics localizes epithelial-immune cross-talk in kidney injury
GEO Series GSE171406. Homo sapiens; Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.