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FIG. 5 in Resampling Bouché's historical localities reveals three new species and helps identifying a new genus of earthworms (Oligochaeta, Hormogastridae and Lumbricidae) in Southeastern France
FIG. 5. — Distribution of newly described Lumbricidae species, Flabellodrilus luberonensis Gérard, Decaëns & Marchán, n. gen., n. sp. and Allolobophora delitescens Gérard, Decaëns & Marchán, n. sp. (stars), and their closest relatives (circles) in Southern France. All species within the genus Flabellodrilus Gérard, Decaëns & Marchán, n. gen. are represented. Credits: Google 2022.
APPENDIX 1 in Resampling Bouché's historical localities reveals three new species and helps identifying a new genus of earthworms (Oligochaeta, Hormogastridae and Lumbricidae) in Southeastern France
APPENDIX 1. — Full multilocus phylogenetic tree focused on Allolobophora-related Lumbricidae genera. The tree was obtained from Bayesian inference based on the concatenated sequences of the COI-16S-ND1-12S- 28S molecular markers. Posterior probability values are shown beside nodes.
FIG. 8 in Resampling Bouché's historical localities reveals three new species and helps identifying a new genus of earthworms (Oligochaeta, Hormogastridae and Lumbricidae) in Southeastern France
FIG. 8. — Distribution of Vignysa callasensis Gérard, Decaëns & Marchán, n. sp. (star) and its closest relatives (circles) in Southern France. All species of the genus Vignysa Bouché, 1970 are represented. Credits: Google 2022.
Figs 1–8 in Three New Microthoracids (Ciliophora, Nassophorea) from Austria and Venezuela
Figs 1–8. Drepanomonas minuta (1–6) and Drepanomonas revoluta (7, 8) from life (1–3, 7, 8) and after protargol impregnation (4–6). 1, 2 – right and left side view of a representative specimen, length 20 µm, showing the flat cortex and the crenellations along the somatic kineties. This species has only 1 or 2 extrusomes and several non-ciliated basal bodies (arrowheads) in kineties 6 and 7; 3 – dorsal view showing the slightly convex right and left side; 4 – ventral view of a paratype specimen, showing the ventral ciliary pattern and the postoral complex. The anterior portion of kinety 2 is blended by the deeply impregnated macronucleus; 5, 6 – right and left side view of holotype specimen, length 20 µm. The kinetids of kinety 6 form widely spaced pairs; 7, 8 – Drepanomonas revoluta, right and left side view (from Foissner 1987). Note the deep furrow on the left side and the widely spaced kinetids of the postoral complex. E – extrusomes, K1–9 – somatic kineties, M – adoral membranelles, MA – macronucleus, MI – micronucleus, PC – postoral complex, PO(1–3) – preoral kineties, R – cortical ridges. Scale bars: 10 µm.
Figs 33–40 in Three New Microthoracids (Ciliophora, Nassophorea) from Austria and Venezuela
Figs 33–40. Drepanomonas multidentata from life (33–36) and after protargol impregnation (37–40). 33–36 – left side views of different specimens at four focal planes, showing the two conspicuous spines left and posterior of the oral opening, the left side ridges each forming an anterior spine, and the two anterior spines of the tridentate pattern; 37, 38 – right and left side view of holotype and of a paratype specimen, showing the ciliary and nuclear pattern. The posterior portion of kinety 9 is either absent or in line with kinety 2. The posterior cilium of kinety 6 appears slightly thickened in the basal portion (arrowhead); 39 – ventral view of a paratype specimen, showing the oblique preoral kineties and the postoral complex; 40 – ventral view of a late divider, showing that kineties 8 and 9 consist of two and three segments, respectively, of which the posterior segment of kinety 9 will possibly align with kinety 2 (see Fig. 37). The left segment of the postoral complex consists of four ciliated monokinetids. A – anterior body end, K1–9 – somatic kineties, LAS – left anterior spines, LVS – left ventro-lateral spines, M – adoral membranelles, MA – macronucleus, MI – micronucleus, NK – nasse kinetosomes, PC – postoral complex, PO(1–3) – preoral kineties, R – ridges, T – excretory tube, TP – spines of the tridentate pattern. Scale bars: 15 µm (Figs 33–36) and 10 µm (Figs 37–40).
Figs 9–15 in Three New Microthoracids (Ciliophora, Nassophorea) from Austria and Venezuela
Figs 9–15. Drepanomonas minuta after protargol (9–13) and Klein-Foissner silver nitrate impregnation (14, 15). 9, 10 – right and left side view of the holotype and a paratype specimen, showing the kinetid pattern and the nuclear apparatus; 11 – ventral view of a paratype specimen, showing the obliquely arranged preoral kineties and the postoral complex; 12, 13 – right and left side view of paratype specimens, showing the slenderly semi-ellipsoidal body and the characteristic posterior extrusome; 14, 15 – right and left side view, showing the kinetid pattern and the cytopyge. CY – cytopyge, E – extrusomes, K1–9 – somatic kineties, M – adoral membranelles, MA – macronucleus, MI – micronucleus, PC – postoral complex, PO(1–3) – preoral kineties. Scale bars: 10 µm.
Figs 16–24 in Three New Microthoracids (Ciliophora, Nassophorea) from Austria and Venezuela
Figs 16–24. Drepanomonas multidentata (16–21) and D. dentata (22–24) from life (16, 17, 22–24) and after protargol impregnation (18–21). 16, 17 – right and left side view of a representative specimen, length 45 µm, showing the crescentic body and the cortical ridges. The right side ridges form an obfalcate plate with a subapical spine and a shallow concavity in the posterior portion (asterisk); the two left side ridges, each with a spine anteriorly, produce a tridentate pattern posteriorly. Note the three highly characteristic ventro-lateral spines in the surrounding of the oral opening. 18, 19 – right and left side view of holotype specimen, length 35 µm, showing the kinetid pattern and the nuclear apparatus; 20 – ventral view of a paratype specimen, showing the obliquely arranged preoral kineties, the circumoral basal bodies, and the postoral complex. The posterior segment of somatic kinety 1 cannot be seen in this specimen because it is over the deeply impregnated macronucleus (outline dotted); 21 – in dividing specimens, three adoral membranelles are recognizable both in proter and opisthe. The arrowheads mark the ventro-lateral spines; 22–24 – D. dentata (22, 23, from Fresenius 1858; 24, from Kreutz 1998), showing the crescentic body, the tooth-like projection on the ventral side (triangle), the serrate dorsal (arrows) and ventral (arrowhead) margin, and the cortical ridges. A – anterior body end, K(1–9) – somatic kineties, LAS – left anterior spines, LVS – left ventro-lateral spines, M(1–3) – adoral membranelles, MA – macronucleus, MI – micronucleus, NK – nasse kinetosomes, P – posterior body end, PC – postoral complex, PO(1–3) – preoral kineties, R – ridges, RVS – right ventro-lateral spine, SAS – subapical spine, T – excretory tube of contractile vacuole, TP – spines of the tridentate pattern. Scale bars: 10 µm.
Figs 7-12 in Three new Colletes species from Iran (Hymenoptera, Colletidae)
Figs 7-12: Colletes rayensis KUHLMANN nov.sp., Holotype male (7) lateral view; (8) metasoma; (9) metasomal terga T1-T2; (10) metasomal tergum T7; (11) gonostylus; (12) metasomal sternum S7.
Figs 13-18 in Three new Colletes species from Iran (Hymenoptera, Colletidae)
Figs 13-18: Colletes sirjanensis KUHLMANN nov.sp., Holotype male (13) lateral view; (14) dorsal view; (15) metasoma; (16) metasomal terga T1-T2; (17) gonostylus; (18) metasomal sternum S7.
Figs 1-6 in Three new Colletes species from Iran (Hymenoptera, Colletidae)
Figs 1-6: Colletes lutensis KUHLMANN nov.sp., Holotype male (1) lateral view; (2) dorsal view; (3) metasomal tergum T7; (4) metasoma; (5) gonostylus; (6) metasomal sternum S7.
Fig. 3 in Sphecid wasps of the genus Cerceris LATREILLE, 1802 from Oman, with description of three new species (Hymenoptera, Apoidea, Crabronidae)
Fig. 3. Cerceris pseudovittata DOLLFUSS nov.sp. male: (a) clypeus; (b) clypeus lateral view; (c) flagellum; (d) petiolus; (e) pygidial plate; (f) genitalia dorsal view; (g) gonostylus lateral view.
Fig. 1 in Sphecid wasps of the genus Cerceris LATREILLE, 1802 from Oman, with description of three new species (Hymenoptera, Apoidea, Crabronidae)
Fig. 1. Cerceris mahdaensis DOLLFUSS nov.sp. male: (a) clypeus; (b) clypeus lateral view; (c) flagellum; (d) pygidial plate; (e) petiolus; (f) genitalia dorsal view; (g) gonostylus lateral view.
Fig. 2 in Sphecid wasps of the genus Cerceris LATREILLE, 1802 from Oman, with description of three new species (Hymenoptera, Apoidea, Crabronidae)
Fig. 2. Cerceris omaniensis DOLLFUSS nov.sp. female: (a) clypeus; (b) clypeus lateral view; (c) flagellum; (d) pygidial plate; (e) petiolus.
Application of Close-Range SfM Photogrammetry on three bases of Etruscan Bronze Candelabra from Spina Necropolises
<p>Application of Close-Range SfM Photogrammetry on three bases of Etruscan Bronze Candelabra from Spina Necropolises. </p> <p>This dataset contains the photogrammetry made 3D models of three Etruscan Bronze Candelabra found at Spina, dated to the 4th cent. BC, kept in the Archaeological Museum of Ferrara.</p> <p>The models were made through Agisoft Metashape from previously taken RAW photos, at the National Archaeological Museum of Ferrara, for master thesis purposes. Some minor issues of the meshes were solved using Blender before texturing the models.</p> <p>The folders are divided according to the tombs of provenance of the candelabra (T. 545, T. 1122, T. Unknown) and every folder contain:</p> <ul> <li>The OBJ</li> <li>The texture</li> <li>An additional folder with the reports generated from Agisoft Metashape</li> </ul>
Data and code associated with the manuscript: Three centuries of snowpack decline at an Alpine pass revealed by cosmogenic paleothermometry and luminescence photochronometry
<p>This dataset contains the data as well as the Matlab codes needed to reproduce the results in the following manuscript:</p> <p>Guralnik, B., Tremblay, M.M., Phillips, M., Sellwood, E.L., Gribenski, N., Presl, R., Haberkorn, A., Sohbati, R., Shuster, D.L., Valla, P., Jain, M., Schindler, K., Wallinga, J., and Hippe, K., Three centuries of snowpack decline at an Alpine pass revealed by cosmogenic paleothermometry and luminescence photochronometry. </p> <p>Briefly, this manuscript presents novel datasets of cosmogenic paleothermometery (quartz He-3) and luminescence photochronometery (feldspar IRSL), whose pairing constrains the temperature and insolation history of three bedrock outcrops at the Gotthard Pass in Switzerland over the last ~15,000 years. </p> <p>The data include (1) measured concentrations of cosmogenic Be-10, C-14, and He-3 in quartz, (2) stepwise degassing experiments on proton irradiated quartz grains that are used to determine sample-specific He-3 diffusion kinetics, (3) best-fit multiple diffusion domain (MDD) models to the proton-induced He-3 diffusion experiments, (5) Natural radioactivity and calculated feldspar infrared stimulated luminescence (ISRL) dose rates, (6) feldspar ISRL depth profiles, and (7) high-resolution microrelief surface scans and analysis.</p> <p>The code includes scripts necessary to reproduce the figures and results associated with this manuscript. The code is organized by figure into subfolders, and any data needed to reproduce a figure should be included in that folder. All original codes are distributed under the GNU General Public License. Codes written by others and utilized here are redistributed under their original license according to the terms and conditions therein, and are provided in the folder 'external.'</p> <p>Any questions about original Matlab codes published here should be directed to Benny Guralnik, benny.guralnik@gmail.com.</p>
Water depth influences survival and predator-specific patterns of nest loss in three secretive marsh bird species
<p>Wetlands have become increasingly rare in the United States, negatively influencing wetland-dependent birds, and many remaining wetlands are intensively managed through seasonal dewatering mimicking historic flood pulses during spring and summer. However, water around nests may provide protection from terrestrial predators, and lowering water levels during the breeding season of wetland birds may increase predation risk and exacerbate marsh bird population declines. Understanding interactions between water depth, nesting marsh birds, and nest predators is critical to aid managers in developing a multi-species management approach in emergent wetlands. During the 2020 and 2021 breeding seasons, we examined nest survival of 148 marsh bird nests (American Coot, <em>Fulica americana</em>, <em>n</em> = 1; Common Gallinule, <em>Gallinula galeata</em>, <em>n</em> = 64; and Least Bittern; <em>Ixobrychus exilis</em>, <em>n</em> = 83) and installed cameras at 78 nests to identify predators at a large, restored floodplain wetland in Illinois where the primary management technique is seasonal water removal to stimulate germination of moist soil plants. We found nest predation of, and abandonment by, Least Bittern and Common Gallinule were related to shallower water, and early season, high volume dewatering. Least Bitterns nested more commonly along wetland edges and nests farther from the shore were more likely to survive. Similarly, we found mammalian depredation of nests and nest abandonment decreased when deeper water was present around nests. Alternatively, snake predation was observed earlier in the year prior to water removal from inundated emergent vegetation. Our results demonstrate water depth may be an important deterrent of nest predators, especially mammals, during the breeding season. Further, we recommend managers delay dewatering until after the nesting season at sites where management for conservation-priority marsh birds is a focus.</p>
Figure 8. – Eleotris valadei n in Eleotris (Teleostei: Eleotridae) of the Indian Ocean: an overview with the description of three new species
Figure 8. – Eleotris valadei n. sp., MNHN-IC-2020-0065, paratype, Nouvelle-Découverte River, Praslin, Seychelles Islands (tag 12584) (© M.I. Mennesson, P. Keith).
Figure 3 in Eleotris (Teleostei: Eleotridae) of the Indian Ocean: an overview with the description of three new species
Figure 3. – Eleotris pellegini, Grand St Louis River, Mahe, Seychelles Islands (tag 12592) (© M.I. Mennesson, P. Keith).
Figure 2 in SYNOPSIS OF BEGONIA (BEGONIACEAE) FROM THE NORTHERN ARM OF SULAWESI AND SANGIHE ISLAND, INDONESIA, INCLUDING THREE NEW SPECIES
Figure 2. Distribution maps of Begonia species occurring on the northern arm of Sulawesi. Distribution points are from georeferenced collections from major herbarium collections (B, BO, E, K, KRB, L, SING), the Begonia Resource Centre (Hughes et al., 2015–) and the Sulawesi Begonia Data Portal (Thomas et al., 2013, continuously updated).
Figure 12. Begonia rieckei. A in SYNOPSIS OF BEGONIA (BEGONIACEAE) FROM THE NORTHERN ARM OF SULAWESI AND SANGIHE ISLAND, INDONESIA, INCLUDING THREE NEW SPECIES
Figure 12. Begonia rieckei. A, Habit, reddish leaves with white dots along the margin and between the veins; B, inflorescence; C, male flowers; D, female flower; E and F, infructescence; G, ovary (crosssection of middle part). A from W.H. Ardi WI410; B, D and F from W.H. Ardi WI207; C, E and G from W.H. Ardi WI391. Photographs: W. H. Ardi.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.