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Digitized, corrected and supplemented data on net zooplankton of the Far East seas and adjacent Pacific Ocean waters from five rare reference books published in Russian in limited editions
<p>Data on plankton collected by the Juday net in 1984-2013 in the Far Eastern seas and the north-western Pacific containing the species composition, occurrence and abundance of zooplankton in the surveyed area. The data is aggregated by species, developmental stages, size fractions, regions, vertical layers of water, light and dark time of day, four seasons of the year and perennial periods. It is accompanied shape-files with polygons of the regions by which data is summarized with information about surface areas and water volumes in each of them. The scope of application of this data is fundamental to the management of marine resources, aquaculture development, nature conservation, and assessment of the damage of various anthropogenic factors on nature.</p>
Data and scripts for figures for "The modeled seasonal cycles of land biosphere and ocean N2O fluxes and atmospheric N2O"
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FIGURE 36. Parmotrema reunionicum. A in Small island but great diversity: thirty six species of Parmotrema (Parmeliaceae, lichenized Ascomycota), including sixteen new species, on Réunion (Mascarenes), with additional data from the Western Indian Ocean
FIGURE 36. Parmotrema reunionicum. A: Distribution on Réunion (UTM 2×2 km grid system); B: Bioclimatic characteristics of collection site (abbreviations and threshold values for thermotype and ombrotype horizons from Rivas-Martínez et al. 2011: 17–18); C: Sorediate lobes with marginal soralia, at first ± linear interrupted or at the tip of very short laciniae, then coalescent and forming ± rounded clusters (holotype); D: Sorediate lobe with some subcapitate submarginal soralia (holotype); E: Gross morphology of thallus (holotype). Scale bars: A = 10 km; C = 3 mm; D = 2 mm; E = 10 mm.
FIGURE 30. Parmotrema occultum. A in Small island but great diversity: thirty six species of Parmotrema (Parmeliaceae, lichenized Ascomycota), including sixteen new species, on Réunion (Mascarenes), with additional data from the Western Indian Ocean
FIGURE 30. Parmotrema occultum. A: Distribution on Réunion (UTM 2×2 km grid system); B: Bioclimatic characteristics of collection sites (abbreviations and threshold values for thermotype and ombrotype horizons from Rivas-Martínez et al. 2011: 17–18); C: Transverse sections of mature apothecia of P. crinitum (left, Masson 974.5107) and P. occultum (right, holotype), stained in lactic cotton blue, showing the cupulate proper exciple clearly thicker in P. occultum; D: Isidiate lobe with ciliate, simple to coralloid-branched isidia (Masson 974.4269); E: Gross morphology of thallus (holotype). Scale bars: A = 10 km; C = 100 µm; D = 3 mm; E = 10 mm.
FIGURE 7. Parmotrema aurantioreagens. A in Small island but great diversity: thirty six species of Parmotrema (Parmeliaceae, lichenized Ascomycota), including sixteen new species, on Réunion (Mascarenes), with additional data from the Western Indian Ocean
FIGURE 7. Parmotrema aurantioreagens. A: Distribution on Réunion (UTM 2×2 km grid system); B: Bioclimatic characteristics of collection site (abbreviations and threshold values for thermotype and ombrotype horizons from Rivas-Martínez et al. 2011: 17–18); C: Upper surface of lobes with marginal cilia unevenly distributed (holotype); D: Sorediate lobe with marginal soralia at the tip of short laciniae, and margin of lower surface mottled with ivory white (holotype); E: Gross morphology of thallus (holotype). Scale bars: A = 10 km; C = 5 mm; D = 4 mm; E = 10 mm.
FIGURE 9. Parmotrema brachyblepharum. A in Small island but great diversity: thirty six species of Parmotrema (Parmeliaceae, lichenized Ascomycota), including sixteen new species, on Réunion (Mascarenes), with additional data from the Western Indian Ocean
FIGURE 9. Parmotrema brachyblepharum. A: Distribution on Réunion (UTM 2×2 km grid system); B: Bioclimatic characteristics of collection site (abbreviations and threshold values for thermotype and ombrotype horizons from Rivas-Martínez et al. 2011: 17–18); C: Type locality, a disturbed submontane Pandanus wet thicket crossed by a track; D: Sorediate lobe with marginal, linear discontinuous soralia and subgranulose soredia (Masson 974.4443); E: Gross morphology of thallus (holotype). Scale bars: A = 10 km; D = 1 mm; E = 10 mm.
FIGURE 5 in Small island but great diversity: thirty six species of Parmotrema (Parmeliaceae, lichenized Ascomycota), including sixteen new species, on Réunion (Mascarenes), with additional data from the Western Indian Ocean
FIGURE 5. Frequency of the 36 Parmotrema species reported from Réunion according to the number of UTM 1×1 km grid cells where they have been collected at least once.
FIGURE 13. Parmotrema cooperi. A in Small island but great diversity: thirty six species of Parmotrema (Parmeliaceae, lichenized Ascomycota), including sixteen new species, on Réunion (Mascarenes), with additional data from the Western Indian Ocean
FIGURE 13. Parmotrema cooperi. A: Distribution on Réunion (UTM 2×2 km grid system); B: Bioclimatic characteristics of collection sites (abbreviations and threshold values for thermotype and ombrotype horizons from Rivas-Martínez et al. 2011: 17–18); C: Gross morphology of thallus (Masson 974.5071); D: Sorediate lobes with marginal and submarginal soralia at revolute apices (Masson 974.5071). Scale bars: A = 10 km; C = 10 mm; D = 5 mm.
FIGURE 11. Parmotrema cetratum. A in Small island but great diversity: thirty six species of Parmotrema (Parmeliaceae, lichenized Ascomycota), including sixteen new species, on Réunion (Mascarenes), with additional data from the Western Indian Ocean
FIGURE 11. Parmotrema cetratum. A: Distribution on Réunion (UTM 2×2 km grid system); B: Bioclimatic characteristics of collection site (abbreviations and threshold values for thermotype and ombrotype horizons from Rivas-Martínez et al. 2011: 17–18); C: Gross morphology of thallus (Kalb & Kalb 33714); D: Laciniate and ciliate lobes, with ± reticulate white-maculate upper surface (K. & A. Kalb 33714). Scale bars: A = 10 km; C = 10 mm; D = 4 mm.
FIGURE 15. A in Small island but great diversity: thirty six species of Parmotrema (Parmeliaceae, lichenized Ascomycota), including sixteen new species, on Réunion (Mascarenes), with additional data from the Western Indian Ocean
FIGURE 15. A: Comparison of the average thickness (± SE) of the cupular exciple of mature apothecia of 10 specimens of P. crinitum and one specimen of P. occultum. Means and standard errors were calculated from 5–12 measurements taken on a mature apothecium from each specimen of P. crinitum, and on two different mature apothecia from the same thallus of P. occultum (Masson 974.4966); B: Scatter plot of mean ascospore width versus mean ascospore length for 10 specimens of P. crinitum, two of which were also genetically analysed. For each sample, 30 randomly selected ascospores from a single well-developed apothecium were measured.
Suomi-NPP VIIRS Regional Ocean Color (OC) - Near Real Time (NRT) Data, version R2022.0
The Ocean Biology DAAC produces near real-time (quicklook) products using the best-available combination of ancillary data from meteorological and ozone data. As such, the inputs and the calibration used are less than optimal. Quicklook products provide a snapshot of the data during a short time period within a single orbit.
Sentinel-3B OLCI Level-2 Regional Earth-observation Full Resolution (EFR) Ocean Color (OC) - Near Realtime Data, version R2022.0
The Ocean Biology DAAC produces near real-time (quicklook) products using the best-available combination of ancillary data from meteorological and ozone data. As such, the inputs and the calibration used are less than optimal. Quicklook products provide a snapshot of the data during a short time period within a single orbit.
NOAA-20 VIIRS Regional Ocean Color (OC) - Near Real Time (NRT) Data, version R2022.0
The Ocean Biology DAAC produces near real-time (quicklook) products using the best-available combination of ancillary data from meteorological and ozone data. As such, the inputs and the calibration used are less than optimal. Quicklook products provide a snapshot of the data during a short time period within a single orbit.
GLAS/ICESat L2 Ocean Altimetry Data (HDF5) V034
GLAH06 is used in conjunction with GLAH05 to create the Level-2 altimetry products. Level-2 altimetry data provide surface elevations for ice sheets (GLAH12), sea ice (GLAH13), land (GLAH14), and oceans (GLAH15). Data also include the laser footprint geolocation and reflectance, as well as geodetic, instrument, and atmospheric corrections for range measurements. The Level-2 elevation products, are regional products archived at 14 orbits per granule, starting and stopping at the same demarcation (± 50° latitude) as GLAH05 and GLAH06. Each regional product is processed with algorithms specific to that surface type. Surface type masks define which data are written to each of the products. If any data within a given record fall within a specific mask, the entire record is written to the product. Masks can overlap: for example, non-land data in the sea ice region may be written to the sea ice and ocean products. This means that an algorithm may write the same data to more than one Level-2 product. In this case, different algorithms calculate the elevations in their respective products. The surface type masks are versioned and archived at NSIDC, so users can tell which data to expect in each product. Each data granule has an associated browse product.
NOAA-21 VIIRS Regional Ocean Color (OC) - Near Real Time (NRT) Data, version R2022.0
The Ocean Biology DAAC produces near real-time (quicklook) products using the best-available combination of ancillary data from meteorological and ozone data. As such, the inputs and the calibration used are less than optimal. Quicklook products provide a snapshot of the data during a short time period within a single orbit.
OrbView-2 SeaWiFS Regional Global Area Coverage (GAC) Ocean Color (OC) Data, version R2022.0
The SeaWiFS instrument was launched by Orbital Sciences Corporation on the OrbView-2 (a.k.a. SeaStar) satellite in August 1997, and collected data from September 1997 until the end of mission in December 2010. SeaWiFS had 8 spectral bands from 412 to 865 nm. It collected global data at 4 km resolution, and local data (limited onboard storage and direct broadcast) at 1 km. The mission and sensor were optimized for ocean color measurements, with a local noon (descending) equator crossing time orbit, fore-and-aft tilt capability, full dynamic range, and low polarization sensitivity.
Sentinel-3A OLCI Level-2 Regional Earth-observation Full Resolution (EFR) Ocean Color (OC) - Near Realtime Data, version R2022.0
The Ocean Biology DAAC produces near real-time (quicklook) products using the best-available combination of ancillary data from meteorological and ozone data. As such, the inputs and the calibration used are less than optimal. Quicklook products provide a snapshot of the data during a short time period within a single orbit.
Terra MODIS Regional Ocean Color (OC) - Near Real Time (NRT) Data, version R2022.0
The Ocean Biology DAAC produces near real-time (quicklook) products using the best-available combination of ancillary data from meteorological and ozone data. As such, the inputs and the calibration used are less than optimal. Quicklook products provide a snapshot of the data during a short time period within a single orbit.
OrbView-2 SeaWiFS Regional Merged Local Area Coverage (MLAC) Ocean Color (OC) Data, version R2022.0
The SeaWiFS instrument was launched by Orbital Sciences Corporation on the OrbView-2 (a.k.a. SeaStar) satellite in August 1997, and collected data from September 1997 until the end of mission in December 2010. SeaWiFS had 8 spectral bands from 412 to 865 nm. It collected global data at 4 km resolution, and local data (limited onboard storage and direct broadcast) at 1 km. The mission and sensor were optimized for ocean color measurements, with a local noon (descending) equator crossing time orbit, fore-and-aft tilt capability, full dynamic range, and low polarization sensitivity.
GLAS/ICESat L2 Ocean Altimetry Data (HDF5) V034
GLAH06 is used in conjunction with GLAH05 to create the Level-2 altimetry products. Level-2 altimetry data provide surface elevations for ice sheets (GLAH12), sea ice (GLAH13), land (GLAH14), and oceans (GLAH15). Data also include the laser footprint geolocation and reflectance, as well as geodetic, instrument, and atmospheric corrections for range measurements. The Level-2 elevation products, are regional products archived at 14 orbits per granule, starting and stopping at the same demarcation (± 50° latitude) as GLAH05 and GLAH06. Each regional product is processed with algorithms specific to that surface type. Surface type masks define which data are written to each of the products. If any data within a given record fall within a specific mask, the entire record is written to the product. Masks can overlap: for example, non-land data in the sea ice region may be written to the sea ice and ocean products. This means that an algorithm may write the same data to more than one Level-2 product. In this case, different algorithms calculate the elevations in their respective products. The surface type masks are versioned and archived at NSIDC, so users can tell which data to expect in each product. Each data granule has an associated browse product.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.