Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
11,105
datasets available to search
ShareScore release 0.9.0
Dataset results
11,105 results for “single cells”
Transcriptome profiling of single HEK293 cells with UMIs on Ion Torrent Proton (Run 20160225)
GEO Series GSE89235. Homo sapiens. 76 samples. Type: Expression profiling by high throughput sequencing.
Human lineage tracing enabled by mitochondrial mutations and single cell genomics [Colonies_scRNA]
GEO Series GSE115214. Homo sapiens. 1016 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA sequencing analysis reveals Greater Epithelial Ridge cells degeneration during postnatal development of cochlea in Rats
GEO Series GSE170810. Rattus norvegicus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell and spatial transcriptomics of vulvar lichen sclerosus reveal multi-compartmental alterations in gene expression and signaling cross-talk
GEO Series GSE274068. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Efficient combinatorial targeting of RNA transcripts in single cells with Cas13 RNA Perturb-seq
GEO Series GSE213957. Mus musculus; Homo sapiens. 55 samples. Type: Expression profiling by high throughput sequencing.
Analysis of individual patient pathway coordination in a cross-species single-cell kidney atlas
GEO Series GSE291551. Homo sapiens; Mus musculus. 11 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell RNAsequencing of Human Naïve Pluripotent Stem Cells to Trophoblast Stem Cells with and without EZH2 inhibition.
GEO Series GSE176173. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
10X Genomics single-cell RNA-Seq data set of CreER mice
GEO Series GSE162713. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-sequencing of Mettl14 conditional knock-out retinas and matched controls
GEO Series GSE206013. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA sequencing of human fallopian tubes from benign donors
GEO Series GSE139079. Homo sapiens. 1857 samples. Type: Expression profiling by high throughput sequencing.
Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics [Aged 1]
GEO Series GSE219014. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Reference component analysis of single-cell transcriptomes elucidates cellular heterogeneity in human colorectal tumors
GEO Series GSE81861. Homo sapiens. 1220 samples. Type: Expression profiling by high throughput sequencing.
Single Cell RNAseq to identify subpopulations of glial progenitors in iPSC-derived oligodendroglial lineage cultures
GEO Series GSE292412. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNAseq analysis of peripheral blood and tumor infiltration immune cells in glioblastoma
GEO Series GSE247824. Homo sapiens. 37 samples. Type: Expression profiling by high throughput sequencing.
single-cell RNA-seq profile of microglia under acute Csf1r inhibition and early repopulation in adult brain
GEO Series GSE150169. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA-seq of brain cells in mice lacking Notch3
GEO Series GSE192510. Mus musculus. 2254 samples. Type: Expression profiling by high throughput sequencing.
Spatiotemporal single-cell analysis of gene expression in the mouse suprachiasmatic nucleus
GEO Series GSE118403. Mus musculus. 82 samples. Type: Expression profiling by high throughput sequencing.
Single cell gene expression profile of cells isolated from human aortic valve leaflets.
GEO Series GSE273980. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptomics resolves basophil differentiation trajectory and identifies pre-basophils
GEO Series GSE206631. Mus musculus. 52 samples. Type: Expression profiling by high throughput sequencing.
A single cell atlas of the human liver tumor microenvironment
GEO Series GSE146409. Homo sapiens. 151 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.