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5,371 results for “Flow”
Flow cytometry data (Clone triplets experiment)
<p>Flow cytometry data of publication:</p> <blockquote> <p>Stelzer, C.P., M. Pichler, P. Stadler, Genome streamlining and clonal erosion in nutrient-limited environments: a test using genome-size variable populations, <em>Evolution</em>, Volume 77, Issue 11, November 2023, Pages 2378–2391, <a href="https://doi.org/10.1093/evolut/qpad144">https://doi.org/10.1093/evolut/qpad144</a></p> </blockquote> <p>Please cite this study if you use the data.</p> <p> </p> <p>Experiments with three clones differing in genome size</p> <p>First Run (05.07.2017-09.08.2017)</p> <p>Second Run (17.08.2017-27.09.2017)</p>
Experimental study on the benefits of nature-based solutions for debris-flow mitigation via synergistic eco-geotechnical measures
<p>This supporting information provides the supplementary data (Raw data and videos) which were used to describe the effects of integrated eco-geotechnical measures on debris flow severity, flow rate, velocity, and particle size by various small-scale flume experiments.</p>
Male dispersal drives gene flow in Timber Rattlesnakes (Crotalus horridus)
<p class="MsoNormal">Threatened across much of their range, timber rattlesnakes (<em>Crotalus horridus</em>) exhibit patterns in movement and genetic diversity that are shaped by many aspects of their environments in ways that may foster or constrain conservation. We combine movement data with nuclear and mitochondrial population genetic data to understand the population structure of snakes in four overwintering sites (hibernacula) in central Pennsylvania. Our analyses support the conclusion that hibernacula separated by only a few kilometers can represent genetically distinct populations. In addition, as the first dataset to compare nuclear and mitochondrial patterns in<em> C. horridus</em>, we provide novel evidence for how likely asymmetry in gene flow (with males responsible for inter-hibernaculum matings) shapes timber rattlesnake population genetics.</p>
Modeling liquid transport in the Earth's mantle as two-phase flow: Effect of an enforced positive porosity on liquid flow and mass conservation
<p>These data files include the raw data for the figures shown in Lee et al. titled as 'Modeling liquid transport in the Earth’s mantle as two-phase flow: Effect of an enforced positive porosity on liquid flow and mass conservation'. <br> </p>
Psycho-physio-neurological correlates of qualitative attention, emotion and flow experiences in a close-to-real-life extreme sports situation: low- and high-altitude slackline walking
<p>It has been indicated that extreme sport activities, despite providing fear, stress and anxiety, also result in a highly rewarding experience. Studies have related this experience to the concept of flow, a positive feeling that individuals undergo when they are completely immersed in an activity. However, little is known about the exact nature of these experiences, and, there are still no empirical results to characterize the brain dynamics during extreme sport practice. This work aimed at investigating changes in psychological responses while recording physiological (heart rate – HR, and breathing rate – BR) and neural (electroencephalographic – EEG) data of eight volunteers, during outdoors slackline walking in a mountainous environment at two different altitude conditions (1 m – low-walk – and 45 m – high-walk – from the ground). Low-walk showed a higher score on flow scale, while high-walk displayed a higher score in the negative affect aspects, which together point to some level of flow restriction during high-walk. The order of task performance was shown to be relevant for the physiological and neural variables. The brain behavior during flow, mainly considering attention networks, displayed the stimulus-driven ventral attention network – VAN, regionally prevailing (mainly at the frontal lobe), over the goal-directed dorsal attention network – DAN. Therefore, we suggest an interpretation of flow experiences as an opened attention to more changing details in the surroundings, i.e., configured as a ‘task-constantly-opened-to-subtle-information experience’, rather than a ‘task-focused experience’.</p>
Psycho-physio-neurological correlates of qualitative attention, emotion and flow experiences in a close-to-real-life extreme sports situation: low- and high-altitude slackline walking
<p>It has been indicated that extreme sport activities, despite providing fear, stress and anxiety, also result in a highly rewarding experience. Studies have related this experience to the concept of flow, a positive feeling that individuals undergo when they are completely immersed in an activity. However, little is known about the exact nature of these experiences, and, there are still no empirical results to characterize the brain dynamics during extreme sport practice. This work aimed at investigating changes in psychological responses while recording physiological (heart rate – HR, and breathing rate – BR) and neural (electroencephalographic – EEG) data of eight volunteers, during outdoors slackline walking in a mountainous environment at two different altitude conditions (1 m – low-walk – and 45 m – high-walk – from the ground). Low-walk showed a higher score on flow scale, while high-walk displayed a higher score in the negative affect aspects, which together point to some level of flow restriction during high-walk. The order of task performance was shown to be relevant for the physiological and neural variables. The brain behavior during flow, mainly considering attention networks, displayed the stimulus-driven ventral attention network – VAN, regionally prevailing (mainly at the frontal lobe), over the goal-directed dorsal attention network – DAN. Therefore, we suggest an interpretation of flow experiences as an opened attention to more changing details in the surroundings, i.e., configured as a ‘task-constantly-opened-to-subtle-information experience’, rather than a ‘task-focused experience’.</p>
Is my model fit for purpose? Validating a population model for predicting freshwater fish responses to flow management
<p>Models based on ecological processes ("process-explicit models") are often used to predict ecosystem responses to environmental changes or management scenarios. However, models are imperfect and need to be validated, ideally by testing their assumptions and outputs against independent empirical data sets. Examples of validation of process-explicit models are rare. Recently, stochastic population models have been developed to predict the likely responses (over 10-120 years) of a riverine fish (golden perch, Macquaria ambigua) to flow management in the Murray-Darling Basin (MDB) in eastern Australia, one of the world's most regulated river basins. Declines of golden perch (and other species) are a direct consequence of altered hydrology, and managers require information to predict how fish will respond to possible future hydrological conditions to guide the substantial investments in flow management. Here, we use two independent field data sets to validate our population model. We compared model predictions to observed trends to ask: (1) how do predicted population sizes and growth rates compare to observed data? (2) does the correlation between predicted and observed population sizes and growth rates vary among populations? (3) does the correlation between predicted and observed population sizes and growth rates vary across observed hydrological conditions? and (4) how do modelled and observed fish movement rates compare? We found reasonable correlations between fish population sizes and growth rates as predicted by the model and observed in independent data sets for several populations (Aim 1) but the strength of these correlations varied among populations (Aim 2) and hydrological conditions (Aim 3). Predicted and observed fish movement rates were strongly correlated (Aim 4). Population models are frequently used in conservation decision-making but are rarely validated. We demonstrate that: (1) validation can identify model strengths and weaknesses; (2) observed data sets often have inherent limitations that can preclude robust validations; (3) validation is likely be more common if appropriate observed data sets are available; and (4) validation should consider the purpose of modelling. Wider consideration of these messages would contribute to more critical examinations of models so they can be most appropriately used in conservation decision-making.</p>
Data for reconstruction of planar flow field
<p>The zip file consists of four subfolders. Refer to "Synopsis.pdf" for detailed explanations on contents in each subfolder.</p>
Tara Nutrient and Flow Cytometry Data
<p>"Tara Oceans systematically collected ~35,000 samples for morphological, genetic, and environmental analyses using standardized protocols across multiple depths at global scale, aiming to facilitate a holistic study on how environmental factors and biogeochemical cycles affect oceanic life. ... Tara Oceans collected seawater samples within the epipelagic layer, both from the surface water and the deep chlorophyll maximum (DCM) layers, as well as the mesopelagic zone." (1)<br> Data provided for time, lat, and lon are mean values based on CTD casts that matched closest in location and depth of the actual sampling locations. This dataset includes environmental, nutrient, diversity, and flow cytometry data associated with samples found in the Tara Eukaryote Annotated 18s OTU Counts and Tara Prokaryote Annotated 16s OTU Counts datasets.</p> <p>(1) https://www-science-org.offcampus.lib.washington.edu/doi/full/10.1126/science.1261359</p>
COMSOL - Pumping well under high Reynolds number flow conditions
<p>This is a coupled multiphysics model that describes non-Darcy flow in porous media and turbulent flow in a wellbore during a pumping event. The numerical model was developed and constructed in COMSOL Multiphysics® 6.0, a commercial finite element analysis and solver software. See <a href="https://www.comsol.com/">https://www.comsol.com/</a>.</p> <p>Simulation data is provided. A 1D finite-difference approach is also developed on MATLAB to directly solve for the behavior of nonlinear flow in a pumping system. MAT file is provided.</p>
Digital Elevation Models (DEMs) after the Shovi (Caucasus) debris flow, 13 August 2023
<p>===========================</p> <p>Introduction</p> <p>On 4 August 2023, a large debris flow struck the mountain resort town of Shovi in Georgia. More on this event here : <a href="https://eos.org/thelandslideblog/the-4-august-2023-debris-flow-at-shovi-in-georgia">https://eos.org/thelandslideblog/the-4-august-2023-debris-flow-at-shovi-in-georgia</a></p> <p>Two Pléiades stereo images were acquired after the event on 13 August 2023, thanks to the activation of the CIEST² (<a href="https://www.poleterresolide.fr/ciest-2-nouvelle-generation-2/">https://www.poleterresolide.fr/ciest-2-nouvelle-generation-2/</a>) scheme. 2023-08-13a covers the lower part, 2023-08-13b the upper/source area.</p> <p>We share here the Pléiades DEMs derived from these images. The collection includes four files:</p> <p>Shovi_2023-08-13a_DEM_2m.tif</p> <p>Shovi_2023-08-13a_DEM_20m.tif</p> <p>Shovi_2023-08-13b_DEM_2m.tif</p> <p>Shovi_2023-08-13b_DEM_20m.tif</p> <p> </p> <p>===========================</p> <p>Methods</p> <p>The Pléiades stereo-images were processed using the Ames Stereo Pipeline (ASP, Beyer et al., 2018), yielding a DEM in 2x2m and 20x20 m GSD and an orthoimage in 0.5x0.5m GSD. The processing was done using as only input the stereo-images and their orientation information, as Rational Polynomial Coefficients (RPCs). The parallel_stereo routine performs all the steps needed in the correlation of the stereo-images, yielding a pointcloud which is then interpolated using the routine point2dem. We used the block matching algorithm and the set of processing parameters from Marti et al. (2016)</p> <p>Beyer, R. A., Alexandrov, O., and McMichael, S.: The Ames Stereo Pipeline: NASA’s Open Source Software for Deriving and Processing Terrain Data, Earth and Space Science, 5, 537–548, https://doi.org/10.1029/2018EA000409, 2018.</p> <p>Marti, R. et al.: Mapping snow depth in open alpine terrain from stereo satellite imagery, The Cryosphere, 10(4), 1361–1380, doi:10.5194/tc-10-1361-2016, 2016.</p> <p> </p> <p>===========================</p> <p>Data Specifications:</p> <p>Cartographic projection: UTM zone 38N (EPSG:32638)</p> <p>Origin of Elevation: meters above WGS84 ellipsoid</p> <p>Raster data format: GeoTIFF</p> <p>NoData value : -9999</p> <p>Pléiades dataset includes only DEMs because a licence needs to be signed with CNES to access Pléiades imagery. Please contact the authors for further information on this.</p> <p> </p> <p>===========================</p> <p>Acknowledgements:</p> <p>Pléiades images were provided under the CIEST² initiative (CIEST2 is part of ForM@Ter (https://en.poleterresolide.fr/) (Pléiades © CNES 2023, distribution AIRBUS DS)</p> <p> </p> <p>===========================</p> <p>Dataset Attribution:</p> <p>This dataset is licensed under a Creative Commons CC BY-NC 4.0 International License (Attribution-NonCommercial).</p> <p> </p> <p>===========================</p> <p>Citation:</p> <p>Please cite this repository as :</p> <p>Berthier E. (2023). Digital Elevation Models (DEMs) after the Shovi flood (Caucasus), 13 August 2023, Dataset distributed on Zenodo: 10.5281/zenodo.8252339</p>
Physiology of the widespread pulsating soft coral Xenia umbellata is affected by food sources, but not by water flow
<p>Coral energy and nutrient acquisition strategies are complex and sensitive to environmental conditions such as water flow. While high water flow can enhance feeding in hard corals, knowledge about the effects of water flow on the feeding of soft corals, particularly those pulsating, is still limited. In this study, we thus investigated the effects of feeding and water flow on the physiology of the pulsating soft coral <em>Xenia</em> <em>umbellata</em>. We crossed three feeding treatments i) no feeding, ii) particulate organic matter [POM] as phytoplankton, and iii) dissolved organic carbon [DOC] as glucose, with four water volume exchange rates (200, 350, 500 and 650 Lh<sup>-1</sup>) over 15 days. Various ecophysiological parameters were assessed including pulsation rate, growth rate, isotopic and elemental ratios of carbon (C) and nitrogen (N) as well as photo-physiological parameters of the Symbiodiniaceae (cell density, chlorophyll-<em>a</em> and mitotic index). Water flow had no significant effect but feeding had a substantial impact on the physiology of the <em>X. umbellata </em>holobiont. In the absence of food, corals exhibited significantly lower pulsation rates, lower Symbiodiniaceae cell density, and lower mitotic indices compared to the fed treatments, yet significantly higher chlorophyll-<em>a</em> per cell and total N content. Differences were also observed between the two feeding treatments, with significantly higher pulsation rates and lower chlorophyll-a per cell in the DOC treatment, but higher C and N content in the POM treatment. Our findings suggest that the <em>X. umbellata</em> holobiont can be viable under different trophic strategies, though favouring mixotrophy. Additionally, the physiology of the <em>X. umbellata</em> may be regulated through its own pulsating behaviour without any positive nor negative effects from different water flow. Thus, this study contributes to our understanding of soft coral ecology, particularly regarding the competitive success and widespread distribution of <em>X. umbellata</em>.</p>
Data underpinning "Unraveling long-time quantum dynamics using flow equations"
<p>The study of many-body quantum dynamics in strongly-correlated systems is extremely challenging. To date few numerical methods exist which are capable of simulating the non-equilibrium dynamics of two-dimensional quantum systems, in part reflecting complexity theoretic obstructions. In this work, we present a new technique able to overcome this obstacle, by combining continuous unitary flow techniques with the newly developed method of scrambling transforms. We overcome the prejudice that approximately diagonalizing the Hamiltonian cannot lead to reliable predictions for relatively long times. To the contrary, we show that the method works well in both localized and delocalized phases, and makes reliable predictions for a number of quantities including infinite-temperature autocorrelation functions. We complement our findings with rigorous incremental bounds on the truncation error. This approach shows that in practice, the exploration of intermediate-scale time evolution may be more feasible than is commonly assumed, challenging near-term quantum simulators.</p>
Time series of flow measurement and water quality monitoring at a large combined sewer overflow in Berlin
<p>The table contains 3 years CSO monitoring time series, already split in 22 separated CSO events. All details about the monitoring set up in the papers and reports indicated below.</p> <p>Fields:</p> <ul> <li>evtID: event ID</li> <li>myDateTime; date/time</li> <li>v: m/s velocity</li> <li>Q: m³/s flow</li> <li>TSS: mg/l TSS concentration</li> <li>COD: mg/l COD concentration</li> <li>CODf: mg/l dissolved COD concentration</li> <li>EC: µS/cm electric conductivity</li> <li>NH4_N: mg/l NH4_N concentration</li> </ul> <p>TSS and COD have been measured with a spectrometer using a linear local calibration as presented in Lepot et al., 2016.</p> <p>ore information about the monitoring set up in </p> <p>Sandoval, S., Torres, A., Pawlowsky-Reusing, E., Riechel, M., Caradot, N. (2013): The evaluation of rainfall influence on CSO characteristics: the Berlin case study. Water Science & Technology Vol. 68 (12): 2683-2690 10.2166/wst.2013.524</p> <p>Caradot, N. (2012): Continuous Monitoring of Combined Sewer Overflows in the Sewer and the Receiving River: Return on Experience. Kompetenzzentrum Wasser Berlin gGmbH; MIA-CSO Project Report</p> <p>Riechel, M., Matzinger, A., Pawlowsky-Reusing, E., Sonnenberg, H., Uldack, M., Heinzmann, B., Caradot, N., von Seggern, D., Rouault, P. (2016): Impacts of combined sewer overflows on a large urban river - Understanding the effect of different management strategies. Water Research 105: 264-273 10.1016/j.watres.2016.08.017</p> <p>Caradot, N., Sonnenberg, H., Riechel, M., Matzinger, A., Rouault, P. (2013): The influence of local calibration on the quality of UV-VIS spectrometer measurements in urban stormwater monitoring. Water Practice & Technology Vol 8 (No 3-4): 417-425 10.2166/wpt.2013.042</p> <p>Lepot, M., Torres, A., Hofer, T., Caradot, N., Gruber, G., Aubin, J.-B., Bertrand-Krajewski, J.-L. (2016): Calibration of UV/Vis spectrophotometers: A review and comparison of different methods to estimate TSS and total and dissolved COD concentrations in sewers, WWTPs and rivers. Water Research 101 (15 September 2016): 519-534 10.1016/j.watres.2016.05.070</p>
Reactive Multiphase Flow in Porous Media at the Darcy Scale: a Benchmark proposal
<p>Description and data files for a "Reactive Two-phase flow Benchmark"</p> <p>Modeling reactive multiphase multicomponent flow in porous media leads to a highly nonlinear coupled system of degenerate partial differential equations and algebraic and/or ordinary differential equations, requiring special numerical treatment. The Benchmark consists of five test problems in total (both in 1D and in 2D), with varying degrees of difficulty, designed to verify the algorithms and<br> the codes dedicated to simulate coupled isothermal Hydro-Chemical processes during injection and storage of CO2 in the subsurface. It is intended to be used as a basis for comparing codes in order to better understand different couplings such as chemical reactions with two-phase flow, phase behavior with equilibrium reactions, dissolution and precipitation</p>
Data from: Contrasting sap flow characteristics between pioneer and late-successional tree species in secondary tropical montane forests of Eastern Himalaya, India
Abstract The interactive role of life-history traits and environmental forcing on plant-water relations is crucial for understanding species response to climate change but remains poorly understood in secondary tropical montane forests (TMFs). Comparing contrasting life-history traits (pioneer vs late-successional species) in a biodiverse Eastern Himalayan secondary TMF, we investigated sap flow responses in co-occurring pioneer species, Symplocos racemosa (n=5) and Eurya acuminata (n=5), and late-successional species, Castanopsis hystrix (n=3), using modified Granier's Thermal Dissipation probes. The fast-growing pioneers S. racemosa and E. acuminata) had 2.1- and 1.6-times higher sap flux density than the late-successional C. hystrix, respectively, and exhibited characteristics of long-lived pioneer species. Significant radial and azimuthal variability in sap flow (V) between species was observed and attributed to life history traits and the canopy's access to sunlight. Nocturnal V (1800-0500 hr) was 13.8 % of daily V and is attributed to stem recharge for evening V (1800-2300 hr) and to endogenous stomatal controls for pre-dawn V (0000-0500 hr). Both the shallow-rooted pioneer species exhibited midday depression in V attributed to photosensitivity and diel moisture stress response. In contrast, deep-rooted C. hystrix transpired unaffected across the dry season likely accessing groundwater. Thus, the secondary broadleaved TMFs, with the dominance of shallow-rooted pioneers, are more prone to the negative impacts of drier and warmer winters than primary forests, which are dominated by deep-rooted species. The study provides an empirical understanding of life-history traits and microclimate modulating plant-water use in widely distributed secondary TMFs in Eastern Himalaya and highlights their vulnerability against warmer winters and reduced snowfall due to climate change.
Data and Code for: Reproductive strategies and their consequences for divergence, gene flow, and genetic diversity in three taxa of Clarkia
<p><span>Differences in reproductive strategies can have important implications for macro- and micro-evolutionary processes. We used a comparative approach through a population genetics lens to evaluate how three distinct reproductive strategies shape patterns of divergence among as well as gene flow and genetic diversity within three closely related taxa in the genus <em>Clarkia</em>. One taxon is a predominantly autonomous self-fertilizer and the other two taxa are predominantly outcrossing but vary in the primary pollinator they attract. In genotyping populations using genotyping-by-sequencing and comparing loci shared across taxa, our results suggest that differences in reproductive strategies in part promote evolutionary divergence among these closely related taxa. Contrary to expectations, we found that the selfing taxon had the highest levels of heterozygosity but a low rate of polymorphism. The high levels of fixed heterozygosity for a subset of loci suggests this pattern is driven by the presence of structural rearrangements in chromosomes common in other <em>Clarkia </em>taxa. In evaluating patterns within taxa, we found a complex interplay between reproductive strategy and geographic distribution. Differences in the mobility of primary pollinators did not translate to a difference in rates of genetic diversity and gene flow within taxa – a pattern likely due to one taxon having a patchier distribution and a less temporally and spatially reliable pollinator. Taken together, this work advances our understanding of the factors that shape gene flow and the distribution of genetic diversity within and among closely related taxa.</span></p>
Results for trend and breakpoint analyses from: Losing flow in free-flowing, Mediterranean-climate streams
<p>Stream drying is happening globally, with significant ecological and social consequences. Most examples of stream drying come from systems influenced by dam operations or those with highly exploited aquifers. Stream drying is also thought to be happening due to climate change, but examples are surprisingly limited. We explored flow trends from the five Mediterranean-climate regions with a focus on unregulated streams with long-term gauge records. We found consistent evidence of decreasing discharge trends, increasing zero-flow days, and steeper downward discharge trends in smaller basins. Beyond directional trends, many systems recently shifted flow state, including some streams that shifted from perennial to intermittent flow states. Our analyses provide evidence of stream drying consistent with climate change, but also highlight knowledge gaps and challenges in empirically and statistically documenting flow regime shifts. We discuss the myriad consequences of losing flow and propose strategies for improving detection and adapting to flow change.</p>
Data from: Demographically explicit scans for barriers to gene flow using gIMble
<p>Identifying regions of the genome that act as barriers to gene flow between recently diverged taxa has remained challenging given the many evolutionary forces that generate variation in genetic diversity and divergence along the genome, and the stochastic nature of this variation. Here we implement a composite likelihood approach for the quantification of barriers to gene flow. This analytic framework captures background selection and selection against locally maladaptive alleles (i.e. genomic barriers) in a model of isolation with migration (IM) as heterogeneity in effective population size (Ne) and effective migration rate (me), respectively. Variation in both effective demographic parameters is estimated in sliding windows via pre-computed likelihood grids. We have implemented genomewide IM blockwise likelihood estimation (gIMble) as a modular tool, which includes modules for pre-processing/filtering of genomic data and performing parametric bootstraps using coalescent simulations. To demonstrate the new approach, we analyse data from a well-studied sister species pair of tropical butterflies with a known history of post-divergence gene flow: Heliconius melpomene and H. cydno. Our analysis uncovers both large effect barrier loci (including well-known wing-pattern genes) and a genome-wide signal of polygenic barrier architecture.</p>
Data for the paper: Drag, lift and torque correlations for axi-symmetric rod-like non-spherical particles in locally linear shear flows
<p>These are the data files for the paper:</p> <p>Drag, lift and torque correlations for axi-symmetric rod-like non-spherical particles in locally linear shear flows</p> <p>authored by: Victor Chéron, Fabien Evrard, and Berend van Wachem</p> <p>#Files<br> Temporally averaged drag, lift and torque coefficients are written in .txt files stored in the folder ResultsCoefficients.<br> Python scripts used to derive the correlations are stored in the folder PythonScripts.<br> Results of an example simulation are provided in the folder SimulationResults.<br> A Python script with the final correlations of the manuscript is also included.</p> <p>#ResultsCoefficients<br> The .txt files are split per coefficient, aspect ratio and shear rate, which can be identified by the name of the .txt file<br> The results obtained for the torque coefficient of the particle of aspect ratio 2.5 for a uniform flow configuration are given in the file:<br> ### Uniform-Torque-Angles-Size2-5.txt<br> The results obtained for the lift coefficient of the particle of aspect ratio 10 for a shear rate 0.2 configuration are given in the file:<br> ### Shear02-Lift-Angles-Size10.txt<br> In these files, the results are ordered per orientation angle and particle Reynolds number.</p> <p>#PythonScripts<br> The python scripts for processing the data are split among three main functions in two files:<br> - Getter.py (reads the .txt files storing the coefficients - separate functions for the drag, lift and torque coefficients - as well as fill up the missing points for spherical particles using the Kurose and Komori correlations)<br> - generalmain (calls the Getter.py function). The Getter.py is called from the generalmain.py file. (run python3<br> generalmain.py). This will return a 1D column vector ordering the variables used to derive the correlations:<br> - Coefficients<br> - Reynolds number<br> - Orientation Angle<br> - Shear rate<br> - Aspect ratio<br> - Additional coefficients.</p> <p>The Python script ManuscriptCorrelations.py has the correlations as derived in the manuscript. This routine can be used to query the correlations, for plotting them or using them in a simulation.</p> <p><br> #SimulationResults<br> Simulation results of one case are provided:<br> - Aspect ratio 2.5, particle Reynolds number 200, orientation angle 90, Shear rate 0.2<br> The fields and particles information are stored in hdf5 file format.<br> A .xmf wrapper file is provided to read the simulation results in paraview.<br> Data up to 40 seconds of real time are provided due to storage limits.</p> <p><br> This research was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) - Project-ID 448292913.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.