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Text-fig. 37. Scanning electron microscope (SEM) images of "Stamen with tricolpate pollen sp. 1"; Catefica locality, Portugal. a) Stamen fragment showing the elongate, tetrasporangiate anther but with the base and apex poorly preserved; b–d) Pollen grains from stamen fragment in equatorial view showing the long colpi and well-developed, heterobrochate reticulum with very distinct large and small lumina; e) Detail of pollen wall showing orbicules with irregular projections; f) Detail of pollen wall showing smooth muri supported by short, densely spaced columellae. Specimen, Catefica 50-S170419 (a–f). Scale bars = 600 Μm (a), 6 Μm (b–d), 1.5 Μm (e, f). in The Early Cretaceous Mesofossil Flora Of Catefica, Portugal: Angiosperms
Text-fig. 37. Scanning electron microscope (SEM) images of "Stamen with tricolpate pollen sp. 1"; Catefica locality, Portugal. a) Stamen fragment showing the elongate, tetrasporangiate anther but with the base and apex poorly preserved; b–d) Pollen grains from stamen fragment in equatorial view showing the long colpi and well-developed, heterobrochate reticulum with very distinct large and small lumina; e) Detail of pollen wall showing orbicules with irregular projections; f) Detail of pollen wall showing smooth muri supported by short, densely spaced columellae. Specimen, Catefica 50-S170419 (a–f). Scale bars = 600 Μm (a), 6 Μm (b–d), 1.5 Μm (e, f).
Text-fig. 14. Scanning electron microscope (SEM) images of "Stamen with Asteropollis-type pollen sp. 1"; Catefica locality, Portugal. a) Stamen with pollen in situ; b–d) Pollen in situ in stamen in (a) showing poorly defined tetrachotomocolpate aperture and semitectate-reticulate tectum; e) Detail of pollen wall showing semitectate-reticulate tectum with long, scattered columellae supporting the narrow muri; note two irregular rows of minute verrucae ornamenting surface of muri. Specimen, Catefica 50- S170385 (a–e). Scale bars = 600 Μm (a), 20 Μm (b), 6 Μm (c, d), 1.5 Μm (e). in The Early Cretaceous Mesofossil Flora Of Catefica, Portugal: Angiosperms
Text-fig. 14. Scanning electron microscope (SEM) images of "Stamen with Asteropollis-type pollen sp. 1"; Catefica locality, Portugal. a) Stamen with pollen in situ; b–d) Pollen in situ in stamen in (a) showing poorly defined tetrachotomocolpate aperture and semitectate-reticulate tectum; e) Detail of pollen wall showing semitectate-reticulate tectum with long, scattered columellae supporting the narrow muri; note two irregular rows of minute verrucae ornamenting surface of muri. Specimen, Catefica 50- S170385 (a–e). Scale bars = 600 Μm (a), 20 Μm (b), 6 Μm (c, d), 1.5 Μm (e).
Text-fig. 11. Scanning electron microscope (SEM) images of isolated "Stamen fragment with Clavatipollenites-type pollen sp. 2"; Catefica locality, Portugal. a) Fragment of tetrasporangiate stamen with pollen in situ; b) Detail from stamen fragment showing distal and proximal surfaces of in situ pollen grains; c) Pollen grain in distal view showing short colpus with irregular margin and aperture membrane covered by irregular verrucae; d) Detail of pollen wall showing tiny spherical orbicules; e) Detail of pollen wall showing the semitectate-reticulate tectum and long, scattered columellae supporting the narrow muri with finely verrucate supratectal ornamentation. Specimen, Catefica 50-S170389 (a–e). Scale bars = 600 Μm (a), 20 Μm (b), 6 Μm (c), 3 Μm (d), 1.5 Μm (e). in The Early Cretaceous Mesofossil Flora Of Catefica, Portugal: Angiosperms
Text-fig. 11. Scanning electron microscope (SEM) images of isolated "Stamen fragment with Clavatipollenites-type pollen sp. 2"; Catefica locality, Portugal. a) Fragment of tetrasporangiate stamen with pollen in situ; b) Detail from stamen fragment showing distal and proximal surfaces of in situ pollen grains; c) Pollen grain in distal view showing short colpus with irregular margin and aperture membrane covered by irregular verrucae; d) Detail of pollen wall showing tiny spherical orbicules; e) Detail of pollen wall showing the semitectate-reticulate tectum and long, scattered columellae supporting the narrow muri with finely verrucate supratectal ornamentation. Specimen, Catefica 50-S170389 (a–e). Scale bars = 600 Μm (a), 20 Μm (b), 6 Μm (c), 3 Μm (d), 1.5 Μm (e).
Text-fig. 7. Scanning electron microscope (SEM, a–c, e, f) and synchrotron radiation X-ray tomographic microscopy (SRXTM, d) images of fruits and pollen grains of Hedyflora crystallifera; Catefica locality, Portugal. a, b) Lateral view of fruits showing the remains of apical tepals and remains of the hypanthium, which is thicker on the edges of the fruit in (b) (arrows); c) Detail of hypanthium surface between the thickenings on the edges of the fruit showing polygonal cells with a central papilla; d) Transverse section (orthoslice xy0600) of fruit and seed showing the finely crystalliferous endotesta (arrowhead) and sclerified outer tegmen (asterisk); e) Distal view of pollen grain from surface of fruit showing the poorly defined tetrachotomocolpate aperture (daggers indicating the four arms of the aperture) and semi-tectate, reticulate tectum; f) Detail of pollen wall showing narrow muri with indistinctly beaded surface ornamentation of minute verrucae in poorly defined rows and supported by long columellae. Specimens, Catefica 49-S172313 (a), Catefica 49-S153159 (b), Catefica 49-S172324 (c), Catefica 49-S172325 (d), Catefica 50-S170453 (e, f). Scale bars = 300 Μm (a, b), 100 Μm (d), 50 Μm (c), 6 Μm (e), 1.5 Μm (f). in The Early Cretaceous Mesofossil Flora Of Catefica, Portugal: Angiosperms
Text-fig. 7. Scanning electron microscope (SEM, a–c, e, f) and synchrotron radiation X-ray tomographic microscopy (SRXTM, d) images of fruits and pollen grains of Hedyflora crystallifera; Catefica locality, Portugal. a, b) Lateral view of fruits showing the remains of apical tepals and remains of the hypanthium, which is thicker on the edges of the fruit in (b) (arrows); c) Detail of hypanthium surface between the thickenings on the edges of the fruit showing polygonal cells with a central papilla; d) Transverse section (orthoslice xy0600) of fruit and seed showing the finely crystalliferous endotesta (arrowhead) and sclerified outer tegmen (asterisk); e) Distal view of pollen grain from surface of fruit showing the poorly defined tetrachotomocolpate aperture (daggers indicating the four arms of the aperture) and semi-tectate, reticulate tectum; f) Detail of pollen wall showing narrow muri with indistinctly beaded surface ornamentation of minute verrucae in poorly defined rows and supported by long columellae. Specimens, Catefica 49-S172313 (a), Catefica 49-S153159 (b), Catefica 49-S172324 (c), Catefica 49-S172325 (d), Catefica 50-S170453 (e, f). Scale bars = 300 Μm (a, b), 100 Μm (d), 50 Μm (c), 6 Μm (e), 1.5 Μm (f).
Text-fig. 13. Scanning electron microscope (SEM) images of "Staminate inflorescence fragment with Clavatipollenites-type pollen sp. 4"; Catefica locality, Portugal. a) Fragment of stamen whorl from staminate inflorescence showing several closely packed, almost sessile stamens that lack a well-developed filament; b, c) Distal and proximal views of pollen grains showing poorly defined aperture with verrucate aperture membrane; d) Detail of pollen wall showing the semitectate-reticulate tectum and long, scattered columellae supporting the narrow muri with finely verrucate supratectal ornamentation. Specimen, Catefica 49-S107782 (a–d). Scale bars = 600 Μm (a), 6 Μm (b, c), 1.5 Μm (d). in The Early Cretaceous Mesofossil Flora Of Catefica, Portugal: Angiosperms
Text-fig. 13. Scanning electron microscope (SEM) images of "Staminate inflorescence fragment with Clavatipollenites-type pollen sp. 4"; Catefica locality, Portugal. a) Fragment of stamen whorl from staminate inflorescence showing several closely packed, almost sessile stamens that lack a well-developed filament; b, c) Distal and proximal views of pollen grains showing poorly defined aperture with verrucate aperture membrane; d) Detail of pollen wall showing the semitectate-reticulate tectum and long, scattered columellae supporting the narrow muri with finely verrucate supratectal ornamentation. Specimen, Catefica 49-S107782 (a–d). Scale bars = 600 Μm (a), 6 Μm (b, c), 1.5 Μm (d).
Text-fig. 12. Scanning electron microscope (SEM) images of isolated "Stamen fragment with Clavatipollenites-type pollen sp. 3"; Catefica locality, Portugal. a) Stamen fragment with pollen in situ; b, c) Pollen grains showing the semitectate-reticulate pollen wall and folds (c) indicating a possible monocolpate aperture; d) Detail of pollen wall showing the semitectate-reticulate tectum and long, scattered columellae supporting the narrow muri with finely verrucate supratectal ornamentation; e) Detail of pollen wall showing tiny, spherical, finely spiny orbicules. Specimen, Catefica 50-S170449 (a–e). Scale bars = 600 Μm (a), 6 Μm (b, c), 1.5 Μm (d, e). in The Early Cretaceous Mesofossil Flora Of Catefica, Portugal: Angiosperms
Text-fig. 12. Scanning electron microscope (SEM) images of isolated "Stamen fragment with Clavatipollenites-type pollen sp. 3"; Catefica locality, Portugal. a) Stamen fragment with pollen in situ; b, c) Pollen grains showing the semitectate-reticulate pollen wall and folds (c) indicating a possible monocolpate aperture; d) Detail of pollen wall showing the semitectate-reticulate tectum and long, scattered columellae supporting the narrow muri with finely verrucate supratectal ornamentation; e) Detail of pollen wall showing tiny, spherical, finely spiny orbicules. Specimen, Catefica 50-S170449 (a–e). Scale bars = 600 Μm (a), 6 Μm (b, c), 1.5 Μm (d, e).
Text-fig. 30. Scanning electron microscope (SEM) images of anther and pollen of Kempia longicolpites; Catefica locality, Portugal. a) Transverse section through an anther showing the four pollen sacs with in situ pollen; b) Pollen in situ from anther in (a) showing very long colpus and loosely attached reticulum; c) Detail of reticulum showing smooth muri supported by short, scattered columellae; d) Pollen grain from anther in (a) enlarged showing colpus extended beyond the equator and loosely attached reticulum; e) Detail of pollen wall showing thick, homogeneous foot layer, columellae and reticulate tectum; note remains of granular endexine (arrows) in the apertural region of the grain; f) Internal view of reticulum showing the short columellae adhering to the muri detached from the foot layer. Specimen, Catefica 49-S101208 (a–f). Scale bars = 100 Μm (a), 20 Μm (b), 6 Μm (d), 3 Μm (c, e, f). in The Early Cretaceous Mesofossil Flora Of Catefica, Portugal: Angiosperms
Text-fig. 30. Scanning electron microscope (SEM) images of anther and pollen of Kempia longicolpites; Catefica locality, Portugal. a) Transverse section through an anther showing the four pollen sacs with in situ pollen; b) Pollen in situ from anther in (a) showing very long colpus and loosely attached reticulum; c) Detail of reticulum showing smooth muri supported by short, scattered columellae; d) Pollen grain from anther in (a) enlarged showing colpus extended beyond the equator and loosely attached reticulum; e) Detail of pollen wall showing thick, homogeneous foot layer, columellae and reticulate tectum; note remains of granular endexine (arrows) in the apertural region of the grain; f) Internal view of reticulum showing the short columellae adhering to the muri detached from the foot layer. Specimen, Catefica 49-S101208 (a–f). Scale bars = 100 Μm (a), 20 Μm (b), 6 Μm (d), 3 Μm (c, e, f).
Text-fig. 10. Scanning electron microscope (SEM) images of isolated "Stamen fragment with Clavatipollenites-type pollen sp. 1"; Catefica locality, Portugal. a) Fragment of tetrasporangiate stamen with pollen in situ; b) Detail from stamen fragment showing distal and proximal surfaces of in situ pollen grains and tiny orbicules on the inner surface of the anther wall (arrows); c) Pollen grains in distal view showing short colpi with irregular margins and aperture membrane with irregular verrucae; d) Detail of pollen wall showing the semitectate-reticulate tectum and long, scattered columellae supporting the narrow muri with finely verrucate supratectal ornamentation. Specimen, Catefica 50-S170387 (a–d). Scale bars = 600 Μm (a), 20 Μm (b), 6 Μm (c), 1.5 Μm (d). in The Early Cretaceous Mesofossil Flora Of Catefica, Portugal: Angiosperms
Text-fig. 10. Scanning electron microscope (SEM) images of isolated "Stamen fragment with Clavatipollenites-type pollen sp. 1"; Catefica locality, Portugal. a) Fragment of tetrasporangiate stamen with pollen in situ; b) Detail from stamen fragment showing distal and proximal surfaces of in situ pollen grains and tiny orbicules on the inner surface of the anther wall (arrows); c) Pollen grains in distal view showing short colpi with irregular margins and aperture membrane with irregular verrucae; d) Detail of pollen wall showing the semitectate-reticulate tectum and long, scattered columellae supporting the narrow muri with finely verrucate supratectal ornamentation. Specimen, Catefica 50-S170387 (a–d). Scale bars = 600 Μm (a), 20 Μm (b), 6 Μm (c), 1.5 Μm (d).
Text-fig. 24. Scanning electron microscope (SEM) images of "Stamen with zona-aperturate pollen"; Catefica locality, Portugal. a) Dorsal view of elongated anther showing the broad connective and very narrow pollen sacs; b) Lateral view of elongated anther showing the broad dorsal and ventral surfaces of the connectives and very narrow pollen sacs; c) Apex of elongated anther showing dorsal and ventral surfaces and very narrow pollen sacs; d) Lateral view of narrow pollen sac showing in situ pollen; e) Detail of pollen grain showing the solid band of exine above the aperture (asterisk); f) Detail of pollen grain showing the solid band of exine above the aperture (asterisk); g) Detail of tectum showing heterobrochate reticulum with lumina of two different sizes supported by long columellae (arrows); h) Detail of pollen grain showing the aperture extending over the ends of the grain (asterisks); i) Detail of tectum showing heterobrochate reticulum with lumina of two different sizes supported by long columellae (arrows). Specimen, Catefica 49-S171527 (a–i). Scale bars = 600 Μm (a, b), 100 Μm (c), 20 Μm (d), 6 Μm (e, f, h), 3 Μm (g), 1.5 Μm (i). in The Early Cretaceous Mesofossil Flora Of Catefica, Portugal: Angiosperms
Text-fig. 24. Scanning electron microscope (SEM) images of "Stamen with zona-aperturate pollen"; Catefica locality, Portugal. a) Dorsal view of elongated anther showing the broad connective and very narrow pollen sacs; b) Lateral view of elongated anther showing the broad dorsal and ventral surfaces of the connectives and very narrow pollen sacs; c) Apex of elongated anther showing dorsal and ventral surfaces and very narrow pollen sacs; d) Lateral view of narrow pollen sac showing in situ pollen; e) Detail of pollen grain showing the solid band of exine above the aperture (asterisk); f) Detail of pollen grain showing the solid band of exine above the aperture (asterisk); g) Detail of tectum showing heterobrochate reticulum with lumina of two different sizes supported by long columellae (arrows); h) Detail of pollen grain showing the aperture extending over the ends of the grain (asterisks); i) Detail of tectum showing heterobrochate reticulum with lumina of two different sizes supported by long columellae (arrows). Specimen, Catefica 49-S171527 (a–i). Scale bars = 600 Μm (a, b), 100 Μm (c), 20 Μm (d), 6 Μm (e, f, h), 3 Μm (g), 1.5 Μm (i).
Text-fig. 9. Scanning electron microscope (SEM) images of stamens and pollen of Proencistemon portugallicus gen. et sp. nov. (a–g) and Proencistemon sp. (h–j); Catefica locality, Portugal. a) Fragment of stamen whorl from staminate inflorescence showing almost sessile anthers; note short bracts at the base of the stamen whorl (arrow) and apparent paired arrangement of the stamens; b) Fragment of stamen whorl showing almost sessile anthers and apparent paired arrangement of the stamens; c) Pollen in situ from stamen whorl in (b) showing poorly defined trichotomocolpate aperture and semitectate-reticulate tectum; d–g) Distal views of pollen in situ from pollen clump showing poorly defined trichotomocolpate aperture, semitectate-reticulate tectum (d–f), and fractured pollen wall with long, scattered columellae supporting narrow muri (g); h) Fragment of staminate inflorescence with narrow, almost sessile, stamens; i, j) Pollen from fragment of staminate inflorescence in (h) showing poorly defined trichotomocolpate aperture (i), semitectate-reticulate tectum (i, j) and long, scattered columellae supporting narrow muri (j). Specimens, Catefica 49-S266015 (a), Catefica 342-S122086 (b, c), Catefica 50-S170394 (d–g), Catefica 49-S107783 (h–j). Scale bars = 600 Μm (a, b, h), 6 Μm (c–f, i), 1.5 Μm (g, j). in The Early Cretaceous Mesofossil Flora Of Catefica, Portugal: Angiosperms
Text-fig. 9. Scanning electron microscope (SEM) images of stamens and pollen of Proencistemon portugallicus gen. et sp. nov. (a–g) and Proencistemon sp. (h–j); Catefica locality, Portugal. a) Fragment of stamen whorl from staminate inflorescence showing almost sessile anthers; note short bracts at the base of the stamen whorl (arrow) and apparent paired arrangement of the stamens; b) Fragment of stamen whorl showing almost sessile anthers and apparent paired arrangement of the stamens; c) Pollen in situ from stamen whorl in (b) showing poorly defined trichotomocolpate aperture and semitectate-reticulate tectum; d–g) Distal views of pollen in situ from pollen clump showing poorly defined trichotomocolpate aperture, semitectate-reticulate tectum (d–f), and fractured pollen wall with long, scattered columellae supporting narrow muri (g); h) Fragment of staminate inflorescence with narrow, almost sessile, stamens; i, j) Pollen from fragment of staminate inflorescence in (h) showing poorly defined trichotomocolpate aperture (i), semitectate-reticulate tectum (i, j) and long, scattered columellae supporting narrow muri (j). Specimens, Catefica 49-S266015 (a), Catefica 342-S122086 (b, c), Catefica 50-S170394 (d–g), Catefica 49-S107783 (h–j). Scale bars = 600 Μm (a, b, h), 6 Μm (c–f, i), 1.5 Μm (g, j).
Supporting dataset for article "Coastal survey data for Perranporth Beach and Start Bay, Southwest England (2006–2021)"
<p>This submission is a dataset associated with the publication: "Coastal survey data for Perranporth Beach and Start Bay, Southwest England (2006–2021)", R. J. McCarroll et al., submitted to Scientific Data, Jan 2023. Included data are multi-method coastal data for the period 2006 to 2021, for two contrasting macrotidal environments in southwest England: (i) cross-shore dominated, dissipative, sandy Perranporth Beach, Cornwall; and (ii) longshore-dominated, reflective gravel beaches within Start Bay, Devon. Data comprise monthly to annual beach profile surveys, annual merged topo-bathymetries, in addition to observed and numerically modelled wave and water levels. These data provide a valuable resource for modelling the behaviour of coastal types not covered by other currently available datasets. See "README.txt" and "_Metadata_DS01-DS13.xlsx" for further details.</p>
BioDiv-Support: Webtool dataset v1.0
<p>This dataset contains data published on the webtool of the BioDiv-Support project:<br> https://biodivsupport-tst.smhi.se/</p> <p>The project involves climate, air pollution and vegetation model projections for assessing ecosystem changes, biodiversity and adaptation, focusing on pristine mountain regions.<br> v1.0 includes data on the Scandinavian Mountains. For detailed information, please see the website.</p>
Supporting information for First-row transition metalloporphenes, metallic conductors or not?
<p>Supporting information for First-row transition metalloporphenes, metallic conductors or not?</p> <p> </p> <p>POSCAR, vasprun.xml, and INCAR files</p>
Simulations and Code in Support of PUMASv1 Revised Paper (GMDD)
<p>Data and Code in Support of Geoscientific Model Development Publication. Revised version.</p> <p>Importance of Ice Nucleation and Precipitation on Climate with the Parameterization of Unified Microphysics Across Scales version 1 (PUMASv1)</p> <p>https://egusphere.copernicus.org/preprints/2022/egusphere-2022-980/</p> <p>https://doi.org/10.5194/egusphere-2022-980</p> <p>mg3_cam6357* files are from Single Column Model experiments</p> <p>cc* files are full 3D fields of single variables.</p> <p>Description of extra files: </p> <p>Code modifications from https://github.com/ESCOMP/CAM/tree/cam6_3_057</p> <p>hetfrz_classnuc.F90, hetfrz_classnuc_cam.F90, micro_pumas_cam.F90, micro_pumas_v1.F90</p> <p>Analysis code used in the Paper:</p> <p>rscam_mg3_profile3pumas.py</p> <p>rscam_multi_pumasTs22v4.ipynb</p> <p>sens_avg_plot4small.ipynb</p> <p> sens_avg_plot_PI4small.ipynb</p> <p> </p>
Factsheets of technologies supporting the circular economy
<p>Technology factsheets supporting the circular economy in the domains of Water, Energy and Materials. They have been created in the NextGen project and are used in the WE Marketplace (mp.watereurope.eu).</p>
Fig. 5 in Biodiversity data supports research on human infectious diseases: Global trends, challenges, and opportunities
Fig. 5. Data sources according to epidemiological level and scale. Representation of the data sources (left column) used for each epidemiological level (central column), and the scale of the corresponding data sources (right). Colors of the left column correspond to general data-sources categories; for example, green corresponds to biological/biodiversity data sources (e.g., Biodiversity repositories and biological general source). Health-related sources are represented in purple (Health gov: governmental, init-program: initiative or programs). Using this broad categorization, most of the sources contribute with data related to the three epidemiological levels, although with an unpaired flow. For example, scientific literature has a lower contribution for hosts/ reservoirs, and biodiversity-biological sources have a minor contribution for pathogens. Most data sources have a global scale meanwhile governmental sources have a relevant contribution to pathogen data. (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)
Fig. 3 in Biodiversity data supports research on human infectious diseases: Global trends, challenges, and opportunities
Fig. 3. Diseases explored in the studies according to the use of GBIF and the taxa class of the causal pathogen. In the right panel: positive studies (i.e., those studies that used GBIF-mediated data for at least one of the variables explored), negative studies in the left. Bars represent the number of studies exploring each disease, and filling colors represent the corresponding taxa class of the disease agent or causal pathogen (Purple scale, with lighter coloration for fungal diseases, followed by parasites, bacteria, and viruses with the darker purple). Abbreviations: the abbreviation Oth (Fungal Oth, Parasite Oth, Bacteria Oth, Virus Oth) represents a category with multiple species, merged to simplify the figure due to the low number of studies of each disease. Ricket-related: diseases related to Rickettsia species; Paras: parasites; Schistos: Schistosomiases; Leishm: Leishmaniases (both cutaneous and visceral); Dis: disease; Bact: bacteria; Fev: fever; V: virus; CoronaV: Coronavirus. (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)
Fig. 2 in Biodiversity data supports research on human infectious diseases: Global trends, challenges, and opportunities
Fig. 2. Research areas identified in the studies. Research areas subcategories are represented in the left axis, and general research area groups in the right axis. Orange circles represent the number of positive studies, the blue circles the negatives, and the black lines between them represent the differences in the number of studies, in which larger lines represent larger differences between positive and negatives. Orange icons correspond to research areas with larger number of positive studies, i.e., positive studies were more related to Biology (Bio), Ecology (Ecol) and Other (Hum Soc: Human society; Phy Env Geo: Physical environmental geology; Earth Atm: Earth and atmospheric sciences). Negative studies were more frequent in research areas with blue icons, including Medical (Med) and Veterinary sciences (Vet: Veterinarian and agriculture). In the green icon (Eng Inf Mat: Engineering, informatics, and mathematics) there was no major differences between groups. Subcategories: Bio Zoo: Biology and zoology; Bio Evo Gen: Biology, evolution, and genetics; Bio Bioch: Biology and biochemistry; Env Mang: Environmental management and sciences; Eco App: Ecological applications; Math Stat: Mathematical statistics; Inf Comp: informatics and computing; Eng Geom: Engineer and geometrics; Microb: Microbiology; Pub Heal: Public health; Med Micro: Medical microbiology; Med Clin Heal: Medical clinical and health. (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)
Fig. 1 in Biodiversity data supports research on human infectious diseases: Global trends, challenges, and opportunities
Fig. 1. General framework of analyses at study- and variable-levels. In the upper section (study-level, in grey), studies are divided in those that used GBIF-mediated data (positives, in orange) and those that did not (negatives, in blue). Positive studies were group according if GBIF was used as the only data source for all variables (2 studies), or if the variables were based on GBIF together with other data sources (105 studies). In the variable-level section (bottom, white background) the total 358 variables extracted from the positive and negative studies were categorized according to the specific use of GBIF, resulting in five types of variables, four of them extracted from the positive studies. Note that in those studies based on GBIF, the different variables could be based on GBIF alone (33 variables), GBIF together with other sources (85), or specific variables may not be based on GBIF-mediated data at all (81 variables). Finally, each variable was related to different epidemiological roles, resulting in a larger number hosts/reservoirs variables, mostly based on GBIF-mediated data, and a higher presence of pathogen species-variables not using GBIF. (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)
Fig. 4 in Biodiversity data supports research on human infectious diseases: Global trends, challenges, and opportunities
Fig. 4. Variables according to taxon class (Y- axis) epidemiological level (bar colour) and the use of GBIF- mediated data. Bars represent the number of variables by each taxon class (Y-axis), separated in two panels according to the use of GBIF-mediated data. In the right panel, variables in which GBIF-mediated data was used (Used_GBIF), in the left panel variables in which data was not obtained from GBIF (NonGBIF). Next to the bars, the number of variables by each epidemi- ological level, and percentage in rela- tion to the total number of variables of each group (Used_GBIF: 120 and Non- GBIF: 238). Taxon classes are grouped by taxonomic associations (e.g., birds, primates, ticks, mosquitoes); however, some were merged to simplify the figure. For example, mamm/oth/var includes multiple mammal species which were sparsely mentioned; simi- larly, hosts/res var, vector other and path other grouped several species participating as hosts/reservoirs, vec- tors, and pathogens, respectively. Bar colors represent epidemiological levels (pathogens, vectors, hosts/reservoirs), and Other (in sienna) includes species participating as hosts' regulator, predators, among others. GBIF-mediated data was only used in three pathogen variables (purple), representing only 2.5% of the variables in which GBIF-mediated data was used, resulting in a remarkable difference with other sources (NonGBIF), in which pathogens represented a 59.7%. (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.