Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

5,978

datasets available to search

ShareScore release 0.7.1

Reset

Dataset results

5,978 results for “Macrophages”

Learn how ShareScore rates datasets ↗
geo24/100

Inflammatory macrophage-derived extracellular vesicles trigger the non-canonical pyroptosis pathway in chondrocytes leading to cartilage catabolism and degeneration in osteoarthritis

GEO Series GSE199193. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2023View details →
geo24/100

Microbial Energy Metabolism Fuels a CSF2-dependent Intestinal Macrophage Niche within Solitary Isolated Lymphoid Tissues via purinergic signaling.

GEO Series GSE231371. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2023View details →
geo24/100

RNA-seq of macrophages and microglia from injured spinal cord after IL-13, IL-4 or PBS treatment

GEO Series GSE158510. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2021View details →
geo24/100

Transcriptome profiling of bone marrow-derived macrophages from wilde type mice and EndoV knockout mice

GEO Series GSE173434. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2022View details →
geo24/100

RNA-seq analysis of IL-10 treatment of wildtype and Ptpn1-/- knockout peritoneal macrophages

GEO Series GSE49449. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2014View details →
geo24/100

Onco-fetal reprogramming of endothelial cells drives immunosuppressive macrophages in Hepatocellular Carcinoma (scRNA-seq)

GEO Series GSE156625. Homo sapiens; Mus musculus. 78 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2020View details →
geo24/100

CD11c+ macrophages are pro-angiogenic and necessary for experimental choroidal neovascularization

GEO Series GSE222094. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenFeb 2023View details →
geo24/100

Microarray analysis of gene expression in Dnmt3a-knockdown macrophages.

GEO Series GSE70631. Mus musculus. 2 samples. Type: Expression profiling by array.

openGEO-OpenMay 2016View details →
geo24/100

Timecourse of mCMV Infection of Bone Marrow-Derived Macrophages (BMDMs)

GEO Series GSE42503. Mus musculus. 25 samples. Type: Expression profiling by array.

openGEO-OpenJul 2015View details →
geo24/100

Murine Bone Marrow Macrophages: Control vs. RANKL Stimulated

GEO Series GSE48629. Mus musculus; Rattus norvegicus; Homo sapiens. 1 samples. Type: Non-coding RNA profiling by array.

openGEO-OpenJul 2013View details →
geo24/100

Comparative Transcriptomic Analysis of Mouse Macrophages Infected with Live Attenuated Vaccine Strains of Mycobacterium tuberculosis

GEO Series GSE290804. Mus musculus. 32 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2025View details →
geo24/100

Monocyte-derived macrophages orchestrate multiple cell-type interactions to repair necrotic liver lesions

GEO Series GSE229498. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2023View details →
geo24/100

Complex interaction of tumor-derived factors instructs the niche specific phenotypes of tumor-associated macrophages (in vitro human macrophage RNA-Seq)

GEO Series GSE301110. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2025View details →
geo24/100

RNA-seq analysis of wild type and Tim-4 KO mice primary peritoneal macrophages

GEO Series GSE214346. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2022View details →
geo24/100

Small RNA sequencing of bone marrow extracellular vesicle labeled Granulocyte macrophage progenitors (GMPs) [GMP.sRNA]

GEO Series GSE127869. Mus musculus. 14 samples. Type: Non-coding RNA profiling by high throughput sequencing.

openGEO-OpenDec 2021View details →
geo24/100

Normal macrophage signaling and gene expression in Rosa26 Cas9-expressing mice

GEO Series GSE298884. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2025View details →
geo24/100

RNA-Seq to profile transcriptomes in colonic macrophages from Tle3KO (Tle3fl/fl, Lyz2-Cre), Tle4KO (Tle4fl/fl, Lyz2-Cre) and WT (Lyz2-Cre) mice

GEO Series GSE183232. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2023View details →
geo24/100

Pharmacological Modulation of BMAL1 Alters Circadian Dynamics and the Macrophage Immune Response

GEO Series GSE255357. Mus musculus. 36 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2025View details →
geo24/100

Opposing macrophage-polarization programs show extensive epigenomic and transcriptional cross-talk [ChIP_broadly]

GEO Series GSE84519. Mus musculus. 13 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenMar 2017View details →
geo24/100

Resident peritoneal macrophage exhibit marked sexual dimorphism in gene expression

GEO Series GSE149014. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2020View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record