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1,023
datasets available to search
ShareScore release 0.9.0
Dataset results
1,023 results for “copy number”
Analysis of transgenerational effects on DNA copy number aberrations in male mice exposed to continuous 0.05mGy/day gamma-rays for 400 days (Primary screening for 0.05mGyF familly).
GEO Series GSE210442. Mus musculus. 16 samples. Type: Genome variation profiling by genome tiling array.
Analysis of transgenerational effects on DNA copy number aberrations in male mice exposed to continuous 1mGy/day gamma-rays for 400 days (Primary screening for 1mGyO familly).
GEO Series GSE211333. Mus musculus. 20 samples. Type: Genome variation profiling by genome tiling array.
Analysis of transgenerational effects on DNA copy number aberrations in male mice exposed to continuous 0.05mGy/day gamma-rays for 400 days (Secondary screening for 0.05mGyA familly).
GEO Series GSE207970. Mus musculus. 16 samples. Type: Genome variation profiling by genome tiling array.
Genome-wide copy number variation profiling in Cynomolgus monkeys using customized NimbleGen CGH microarrays
GEO Series GSE76707. Macaca fascicularis. 21 samples. Type: Genome variation profiling by genome tiling array.
Effect of DNA extraction method on brain DNA copy number estimation
GEO Series GSE71360. Homo sapiens. 25 samples. Type: Genome variation profiling by array.
Gene copy number variations associated with patient survival in uveal melanoma
GEO Series GSE37259. Homo sapiens. 58 samples. Type: Genome variation profiling by SNP array; SNP genotyping by SNP array.
Analysis of transgenerational effects on DNA copy number aberrations in male mice exposed to continuous 1mGy/day gamma-rays for 400 days (Primary screening for 1mGyB familly).
GEO Series GSE211249. Mus musculus. 18 samples. Type: Genome variation profiling by genome tiling array.
Analysis of transgenerational effects on DNA copy number aberrations in male mice exposed to continuous 0.05mGy/day gamma-rays for 400 days (Secondary screening for 0.05mGyD familly).
GEO Series GSE210438. Mus musculus. 20 samples. Type: Genome variation profiling by genome tiling array.
Analysis of transgenerational effects on DNA copy number aberrations in male mice exposed to continuous 1mGy/day gamma-rays for 400 days (Secondary screening for 1mGyJ familly).
GEO Series GSE211318. Mus musculus. 16 samples. Type: Genome variation profiling by genome tiling array.
Analysis of transgenerational effects on DNA copy number aberrations in male mice exposed to continuous 0.05mGy/day gamma-rays for 400 days (Primary screening for 0.05mGyI familly).
GEO Series GSE210452. Mus musculus. 18 samples. Type: Genome variation profiling by genome tiling array.
Somatic copy number variants in monozygotic twins and elderly single-born individuals
GEO Series GSE34467. Homo sapiens. 6 samples. Type: SNP genotyping by SNP array; Genome variation profiling by SNP array.
Analysis of transgenerational effects on DNA copy number aberrations in male mice exposed to continuous 1mGy/day gamma-rays for 400 days (Secondary screening for 1mGyK familly).
GEO Series GSE211321. Mus musculus. 18 samples. Type: Genome variation profiling by genome tiling array.
Copy Number Variation in Brca2 (G25R) variant mouse tumors
GEO Series GSE84854. Mus musculus. 16 samples. Type: Genome variation profiling by genome tiling array.
Tet2 and p53 cooperate to promote leukemia and modulate response to inflammation [Copy number]
GEO Series GSE305288. Mus musculus. 11 samples. Type: Other.
Copy number variation between BJ cells and BJ-derived iPS cells
GEO Series GSE79604. Homo sapiens. 1 samples. Type: Genome variation profiling by genome tiling array.
Analysis of transgenerational effects on DNA copy number aberrations in male mice exposed to continuous 0.05mGy/day gamma-rays for 400 days (Secondary screening for 0.05mGyG familly).
GEO Series GSE210449. Mus musculus. 16 samples. Type: Genome variation profiling by genome tiling array.
Copy Number Data from Archival Leiomyosarcoma
GEO Series GSE39663. Homo sapiens. 25 samples. Type: Genome variation profiling by genome tiling array.
Analysis of transgenerational effects on DNA copy number aberrations in male mice exposed to continuous 1mGy/day gamma-rays for 400 days (Secondary screening for 1mGyO familly).
GEO Series GSE211334. Mus musculus. 20 samples. Type: Genome variation profiling by genome tiling array.
Analysis of transgenerational effects on DNA copy number aberrations in male mice exposed to continuous 1mGy/day gamma-rays for 400 days (Primary screening for 1mGyL familly).
GEO Series GSE211324. Mus musculus. 16 samples. Type: Genome variation profiling by genome tiling array.
Dataset related to article "Copy number alterations in stage I epithelial ovarian cancer highlight three genomic patterns associated to prognosis"
<p>This record contains data related to article "Copy number alterations in stage I epithelial ovarian cancer highlight three genomic patterns associated to prognosis"</p> <p><strong>Background: </strong>Stage I epithelial ovarian cancer (EOC) encompasses five histologically different subtypes of tumors confined to the ovaries with a generally favorable prognosis. Despite the intrinsic heterogeneity, all stage I EOCs are treated with complete resection and adjuvant therapy in most of the cases. Owing to the lack of robust prognostic markers, this often leads to overtreatment. Therefore, a better molecular characterization of stage I EOCs could improve the assessment of the risk of relapse and the refinement of optimal treatment options.</p> <p><strong>Materials and methods: </strong>205 stage I EOCs tumor biopsies with a median follow-up of eight years were gathered from two independent Italian tumor tissue collections, and the genome distribution of somatic copy number alterations (SCNAs) was investigated by shallow whole genome sequencing (sWGS) approach.</p> <p><strong>Results: </strong>Despite the variability in SCNAs distribution both across and within the histotypes, we were able to define three common genomic instability patterns, namely stable, unstable, and highly unstable. These patterns were based on the percentage of the genome affected by SCNAs and on their length. The genomic instability pattern was strongly predictive of patients' prognosis also with multivariate models including currently used clinico-pathological variables.</p> <p><strong>Conclusions: </strong>The results obtained in this study support the idea that novel molecular markers, in this case genomic instability patterns, can anticipate the behavior of stage I EOC regardless of tumor subtype and provide valuable prognostic information. Thus, it might be propitious to extend the study of these genomic instability patterns to improve rational management of this disease.</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.