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2,315
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2,315 results for “Comparative analysis”
Data from: Investigation of the effect of cochlear implant electrode length on speech comprehension in quiet and noise compared with the results with users of electro-acoustic-stimulation, a retrospective analysis
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['Comparative proteomic analysis and bioluminescent reporter gene assays to investigate effects of simulated microgravity on Caco-2 cells']
['Microgravity is one of the most important features in spaceflight. Previous evidence has shown that significant changes to the musculoskeletal and immune systems occurred under microgravity. The present study was undertaken to explore the change in protein abundance in human colon colorectal cells that were incubated for 48 or 72 h either in normal conditions and µG simulated conditions. The comparative proteomic method based on the 18O labeling technique was applied to investigate the up-regulated proteins and down-regulated proteins in SH-SY5Y under simulated microgravity.']
Comparative gene expression analysis in the Arabidopsis thaliana root apex using RNA-seq and microarray transcriptome profiles
The root apex is an important section of the plant root involved in environmental sensing and cellular development. Analyzing the gene profile of root apex in diverse environments is important and challenging especially when the samples are limiting and precious such as in spaceflight. The feasibility of using tiny root sections for transcriptome analysis was examined in this study. To understand the gene expression profiles of the root apex Arabidopsis thaliana Col-0 roots were sectioned into Zone-I (0.5 mm root cap and meristematic zone) and Zone-II (1.5 mm transition elongation and growth terminating zone). Gene expression was analyzed using microarray and RNA seq. Both the techniques arrays and RNA-Seq identified 4180 common genes as differentially expressed (with > two-fold changes) between the zones. In addition 771 unique genes and 19 novel TARs were identified by RNA-Seq as differentially expressed which were not detected in the arrays. Single root tip zones can be used for full transcriptome analysis; further the root apex zones are functionally very distinct from each other. RNA-Seq provided novel information about the transcripts compared to the arrays. These data will help optimize transcriptome techniques for dealing with small rare samples.
Comparative Transcriptomic Analysis of Adult Medaka Tissues Sampled after Adaptation to a Space Environment
To understand how humans adapt to space environments many experiments can be conducted on astronauts while they work aboard the Space Shuttle or the International Space Station (ISS). We also need animal experiments that can apply to human models and help prevent or solve the physical issues we face in space travel. The medaka is a suitable model fish for studying space adaptation because in the second International Microgravity Laboratory mission in 1994 adult fish mated successfully in space during 15 days of flight. In 2012 another space experiment Medaka Osteoclast was performed. Male and female fish (6 weeks old at launching) were maintained in the Aquatic Habitat system for 2 months in the ISS. The RNA-seq analysis of tissues from these fish will revealed tissue-specific responsiveness and common stress responses during space adaptation.
Comparative analysis of gene expression of SLC3A2 monoallelic knockout and wild type clones
GEO Series GSE116162. Homo sapiens. 12 samples. Type: Expression profiling by array.
Gene Expression Analysis of Cancer-Associated Fibroblast (CAF) compared to Normal Fibroblast (NF) [RNA-seq]
GEO Series GSE55870. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Comparative Genomic Analysis of PhoP Regulon in S. Typhi and S. Typhimurium
GEO Series GSE17670. Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella enterica subsp. enterica serovar Typhi str. CT18; Salmonella enterica subsp. enterica serovar Typhi str. Ty2. 12 samples. Type: Expression profiling by array.
Comparative transcriptomic analysis of acute host responses during 2009 pandemic H1N1 influenza infection in mouse, macaque, and swine (macaque dataset)
GEO Series GSE40088. Macaca mulatta; Macaca fascicularis. 6 samples. Type: Expression profiling by array.
RNA-Seq analysis comparing p53-null versus ΔNp63Δ/Δ;p53-null or ΔNp73Δ/Δ;p53-null thymic lymphoma tumors
GEO Series GSE60827. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Comparative Analysis of Host Responses Between Sepsis and COVID-19: A Prospective Observational Study of Whole Blood Transcriptome (miRNA-Seq)
GEO Series GSE243218. Homo sapiens. 72 samples. Type: Non-coding RNA profiling by high throughput sequencing.
miRNA expression analysis of E2F1 knockdown cells compared to control siRNA treated cells
GEO Series GSE147361. Homo sapiens. 6 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Differential expression analysis of HFF cells in G0 phase compared to cells in G1
GEO Series GSE44631. Homo sapiens. 28 samples. Type: Expression profiling by genome tiling array.
Gene expression analysis comparing rat neonatal cardiomyocytes and human iPSC-cardiomyocytes
GEO Series GSE225707. Homo sapiens; Rattus norvegicus. 36 samples. Type: Expression profiling by high throughput sequencing.
Comparative analysis between single-cell RNA-seq and single-molecule RNA FISH indicates that the pyrimidine nucleobase idoxuridine (IdU) globally amplifies transcriptional noise
GEO Series GSE263194. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Comparative analysis of gene expression between PBMCs from TB patients and healthy individuals.
GEO Series GSE148171. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Comparative analysis of the response to iron-limitation in the absence of oxygen in R. sphaeroides
GEO Series GSE47450. Cereibacter sphaeroides 2.4.1. 6 samples. Type: Expression profiling by array; Expression profiling by high throughput sequencing.
Comparative analysis of gene expression between whole and upper epidermis of humans
GEO Series GSE230152. Homo sapiens. 6 samples. Type: Expression profiling by array.
Comparative analysis of mRNA expression in untreated lymph node stroma cells and upon treatment with exosomes derived from ASMLwt, ASML cd44v knockdown cells.
GEO Series GSE34737. Rattus norvegicus. 12 samples. Type: Expression profiling by array.
Next Generation Sequencing for Quantitative Analysis of transcriptome of follicular compared to non-follicular CD8 T cells from HIV+ Lymph nodes
GEO Series GSE78522. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Comparative transcriptome analysis of the skin reveals the innate immunity difference between wild-type and yellow mutant rainbow trout
GEO Series GSE153997. Oncorhynchus mykiss. 6 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.