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6,059 results for “Journale”
Code for noise-based seismic velocity changes estimation with the Bezymianny volcano data set. Journal of Volcanology and Geothermal Research.
<p>This file contains all the data and the python scripts used to estimate seismic velocity changes for the Bezymianny volcano (Klyuchevskoy volcano group). It also includes a guideline README.pdf with the description how to reproduce all the results presented in the paper <strong>Berezhnev Y., Belovezhets N., Shapiro N., Koulakov I. (2022), Temporal changes of seismic velocities below Bezymianny volcano prior to its explosive eruption on 20.12.2017, Journal of Volcanology and Geothermal Research</strong></p>
supplement figure for Rubin et al. Journal of the Endocrine Society. 2022
<p>Supplement figure for Rubin et al. Relationship between hypoglycemia awareness status on Clarke/Gold methods and counterregulatory response to hypoglycemia 2022</p>
International Journal of Social Research Methods: 25th Anniversary Editorial bonus material (methods and data)
<p>This dataset accompanies the 25th Anniversary Editorial bonus material (methods and data) of the International Journal of Social Research Methods.</p> <p>https://www.tandfonline.com/journals/tsrm20/collections/TSRM_25th_Anniversary_SI</p>
Open Access Publication of Public Health Research in African Journals: Dataset
<p>This study explored the open publishing practices of African journals expected to publish articles on Public Health.</p>
Supplemental Material to Journal Article "Determination of as-built properties of fiber reinforced polymers in a wind turbine blade using scanning electron and high-resolution X-ray microscopy"
<p>This set supplements the figure data to the article "Determination of as-built properties of fiber reinforced polymers in a wind turbine blade using scanning electron and high-resolution X-ray microscopy", DOI: <a href="https://doi.org/10.1016/j.jcomc.2022.100310">https://doi.org/10.1016/j.jcomc.2022.100310</a></p>
Dendrochonological dataset related to a medieval chest from the city of Antwerp ('Privilegiekom') and several associated wooden boxes, as published by Haneca et al. 2022 in the International Journal of Wood Culture
<p>This repository contains detailed macro-photographs of the wood structure and tree-ring pattern observed on the examined elements of the medieval ‘Privilegiekom’ chest and individual wooden boxes that were stored inside this chest. On these digital macro-photographs the ring-width pattern could be accuratly measured, and are available in this repository as well. The recorded tree-ring series were further analysed and published by <strong>Haneca <em>et al. </em>2022</strong> in the <em><strong>International Journal of Wood Culture</strong></em>.</p>
ModelE simulation output used in the study "Severe Global Cooling After Volcanic Supereruptions? The Answer Hinges on Unknown Aerosol Size" in Journal of Climate (2024)
<p>The included files are the GISS ModelE output needed to replicate the figures in McGraw et al 2023, "Severe Global Cooling After Volcanic Supereruptions? The Answer Hinges on Unknown Aerosol Size"</p> <p>Most of the data herein is output from GISS ModelE2.2 simulations that did not include interactive aerosol microphysics and chemistry. Instead, aerosol extinction and effective radius were input into the model from scaled Easy Volcanic Aerosol [Toohey et al, GMD 2016] output, as described in this study's Methods section. To calculate volcanic temperature impacts and forcings at combinations of injected sulfur mass and peak effective radius (Reff) that were not simulated, we used 2D linear interpolation with the scipy function 'Rbf'.</p> <p>Separately included is output from GISS ModelE2.1 with MATRIX interactive aerosol microphysics and chemistry [Bauer et al, ACP 2008]. Note that the injections were scaled to match that a 6.5 Tg sulfur (S) injection in ModelE2.1/MATRIX best replicated the aerosol optical depth (AOD) and effective radius observations of the 1991 Pinatubo event despite this injection being most commonly considered an 9 Tg S injection. Hence, to produce the 1000 Tg S eruption, a 722 Tg S injected was simulated. Such a mismatch has been found in other GCMs (eg Mills et al, JGRA 2016) and may be due to aerosol quick-removal processes not represented in these models.</p> <p>Please note that simulated eruption masses are in this dataset listed in units of Tg S, but in the publication are in Tg SO2 (Tg S x 2).</p> <p>Data from other modeling studies included in Fig. 1 and tree ring estimates in Figs. S2 & S4 can be found within the cited studies.</p> <p>For additional information, please contact zachary.mcgraw@columbia.edu</p>
Supplementary Data for "Adoption of Transparency and Openness Promotion (TOP) guidelines across journals"
<p>Supplementary data for: https://zenodo.org/record/7129250</p>
Dataset for "Definition and rationale for placebo composition: Cross-sectional analysis of randomized trials and protocols published in high-impact medical journals"
<p>Contains our data extraction sheets</p>
Dataset used in GMD journal manuscript (egusphere-2022-1136)
<p>Dataset used in the manuscript submitted to Geoscientific Model Development.</p> <p><strong>Title:</strong> PyFLEXTRKR: a Flexible Feature Tracking Python Software for Convective Cloud Analysis</p> <p><strong>Authors: </strong></p> <p>Zhe Feng<sup>1</sup>, Joseph Hardin<sup>1</sup>, Hannah C. Barnes<sup>1,2,3</sup>, Jianfeng Li<sup>1</sup>, L. Ruby Leung<sup>1</sup>, Adam Varble<sup>1</sup>, Zhixiao Zhang<sup>4</sup></p> <p><sup>1</sup>Atmospheric Sciences and Global Change Division, Pacific Northwest National Laboratory, Richland, Washington, USA</p> <p><sup>2</sup>Cooperative Institute for Research in Environmental Sciences at the University of Colorado, Boulder, Colorado, USA</p> <p><sup>3</sup>NOAA Global Systems Laboratory, Boulder, CO, USA</p> <p><sup>4</sup>Department of Atmospheric Sciences, University of Utah, Salt Lake City, Utah, USA</p>
Supporting Information for the Journal Article "The electrostatic potential as a descriptor for the protonation propensity in automated exploration of reaction mechanisms"
<p>This dataset contains the supporting information published together with the article "The electrostatic potential as a descriptor for the protonation propensity in automated exploration of reaction mechanisms" (<a href="https://doi.org/10.1039/C9FD00061E"><em>Faraday Discuss.</em>, <strong>2019</strong>, <em>220</em>, 443</a>).</p>
Supporting Information for the Journal Article "Systematic microsolvation approach with a cluster-continuum scheme and conformational sampling"
<p>This dataset contains the supporting information published together with the article "Systematic microsolvation approach with a cluster-continuum scheme and conformational sampling" (<a href="https://doi.org/10.1002/jcc.26161"><em>J. Comput. Chem.</em>, <strong>2020</strong>, <em>41</em>, 1144</a>).</p>
Supporting Information for the Journal Article "Self-Parametrizing System-Focused Atomistic Models"
<p>This dataset contains the supporting information published together with the article "Self-Parametrizing System-Focused Atomistic Models" (<a href="https://doi.org/10.1021/acs.jctc.9b00855"><em>J. Chem. Theory Comput.</em>, <strong>2020</strong>, <em>16</em>, 1646</a>).</p>
Alligator Reef checklist.xlsx: the spreadsheet version of the checklist of Alligator Reef fishes, from Starck, W.A., Estapé C.J. & Morgan Estapé, A. (2017) The fishes of Alligator Reef and environs in the Florida Keys: a half-century update. Journal of the Ocean Science Foundation, 27, 74–117.
<p>Alligator Reef checklist.xlsx: the spreadsheet version of the checklist of Alligator Reef fishes, from Starck, W.A., Estapé C.J. & Morgan Estapé, A. (2017) The fishes of Alligator Reef and environs in the Florida Keys: a half-century update. Journal of the Ocean Science Foundation, 27, 74–117.</p>
AlligatorReefPhotos.pdf: a selection of images of various reef habitats on Alligator Reef, Florida Keys, from both the 1960s and today, for Starck, W.A., Estapé C.J. & Morgan Estapé, A. (2017) The fishes of Alligator Reef and environs in the Florida Keys: a half-century update. Journal of the Ocean Science Foundation, 27, 74–117.
<p>AlligatorReefPhotos.pdf: a selection of images of various reef habitats from both the 1960s and today, for Starck, W.A., Estapé C.J. & Morgan Estapé, A. (2017) The fishes of Alligator Reef and environs in the Florida Keys: a half-century update. Journal of the Ocean Science Foundation, 27, 74–117.</p>
Species Photos.zip Archive of fish species images for the publication of: Starck, W.A., Estapé C.J. & Morgan Estapé, A. (2017) The fishes of Alligator Reef and environs in the Florida Keys: a half-century update. Journal of the Ocean Science Foundation, 27, 74–117.
<p>Species Photos.zip </p> <p>Archive of fish species images for the publication of:</p> <p>Starck, W.A., Estapé C.J. & Morgan Estapé, A. (2017) The fishes of Alligator Reef and environs in the Florida Keys: a half-century update. Journal of the Ocean Science Foundation, 27, 74–117.</p> <p>323 images, 318 species total,(5 species of Pomacentridae have pictures of both juvenile and adult phases)</p> <p>Carcharodon carcharias screen grab from video*<br> Centropristis ocyurus photo by C.Wangen<br> Dasyatis centroura screen grab from video by Ed. Martin<br> Diapterus sp. photo by Ed Martin. </p> <p>All other photos taken by Carlos Estapé and Allison Estapé in the study area (319 images of 314 species)</p> <p>*YouTube video - Snorkelers Spot Great White Shark Off Islamorada, https://www.youtube.com/watch?v=50l2grfaNQ4</p>
Data supplementing the article "Avoiding quantification bias in metabarcoding: application of a cell biovolume correction factor in diatom molecular biomonitoring" V. Vasselon, A. Bouchez, F. Rimet, S. Jacquet, R. Trobajo, M. Corniquel, K. Tapolczai, I. Domaizon submitted to Methods in Ecology and Evolution journal
<p>These data supplement the article "Avoiding quantification bias in metabarcoding: application of a cell biovolume correction factor in diatom molecular biomonitoring" V. Vasselon, A. Bouchez, F. Rimet, S. Jacquet, R. Trobajo, M. Corniquel, K. Tapolczai, I. Domaizon submitted to Methods in Ecology and Evolution journal</p> <p>The directory contains the following files:</p> <p>1<strong>5 fastq files raw reads (5 mock communities, 3 replicates)</strong><strong>.rar </strong>- contains the 15 fastq files provided by the sequencing platform with demultiplexed DNA reads (raw data prior any bioinformatics treatments).</p> <p><strong>15 fastq files information.xlsx</strong> :</p> <p>- contains the information relative to the 15 fastq files corresponding to the PGM raw data of the 5 mock communities (sequenced with 3 replicates), including: the ID of the fastq files, the mock community name, the replicate number, the final sample Id and the number of raw reads per fastq file.</p> <p>- contains the information of the proportion of the 8 diatoms species (%) used to create the 5 mock communities (estimated from microscopy).</p>
Data Set for the Journal Article "SCINE - Software for Chemical Interaction Networks"
<p>This data archive contains all data and software described and used in the following publication:</p> <p>Thomas Weymuth, Jan P. Unsleber, Paul L. Türtscher, Miguel Steiner, Jan-Grimo Sobez, Charlotte H.<br>Müller, Maximilian Mörchen, Veronika Klasovita, Stephanie A. Grimmel, Marco Eckhoff, Katja-Sophia<br>Csizi, Francesco Bosia, Moritz Bensberg, Markus Reiher, "SCINE --- Software for Chemical Interaction<br>Networks", in preparation.</p> <p>The directory structure is as follows:</p> <ul> <li>software: contains all software used for the example exploration <ul> <li>requirements.txt: lists all Python packages needed to create the virtual environment with which the exploration has been carried out; the virtual environment was created with Python 3.6.8.</li> <li>start.py: script to initialize the database with the reactants</li> <li>step_1.py: script to create the first set of reaction trials; after having set up the trials, execute the script "start.py" with the option "continue"</li> <li>step_2.py: script to create the second set of reaction trials; after having set up the trials, execute the script "start.py" with the option "continue"</li> <li>puffin_1.3.0.sif: Singularity image containing a full Puffin instance (version 1.3.0) to execute all calculations of the exploration</li> <li>submit_container.sh: script to submit the Puffin image to the queueing system</li> </ul> </li> <li>data: contains a complete dump of the database created during the example exploration; additionally, this directory contains a script called "import.sh" which can be used to reimport the data into a MongoDB instance</li> </ul>
MDM data for "Wind driven ocean circulation changes can amplify future cooling of the North Atlantic warming hole" - submitted to Journal of Climate
<p>Data files for MDM simulation used in Journal of Climate submission, "Wind driven ocean circulation changes can amplify future cooling of the North Atlantic warming hole"</p>
Replication package for the article 'The residential patterns of Swiss urban elites. Continuity and change across elite categories (1890-2000),' to appear in the journal 'European Societies,' authored by Pierre Benz; Michael A. Strebel; Roberto Di Capua & André Mach.
<p>The documents in this replication package serve to reproduce the analysis for the article <br>'The residential patterns of Swiss urban elites. Continuity and change across elite categories (1890-2000),' to appear in<br>the journal 'European Societies,' authored by Pierre Benz; Michael A. Strebel; Roberto Di Capua & André Mach.<br>This replication package is created by Pierre Benz (pierre.benz@unil.ch).</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.