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ShareScore release 0.9.0
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2,271 results for “endothelial cells”
Molecular analysis of endothelial and immune cells after anti-angiogenic cancer immunotherapy
GEO Series GSE94920. Mus musculus. 63 samples. Type: Expression profiling by high throughput sequencing.
Single cell lineage tracing of pulmonary endothelial cells in mouse model of Hereditary Hemorrhagic Telangiectasia 2
GEO Series GSE269174. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Pluripotent stem cell-derived corneal endothelial cells as an alternative to donor corneal endothelium in keratoplasty
GEO Series GSE173692. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Macrophages preserve endothelial cell specialization in the adrenal gland to modulate aldosterone secretion and blood pressure
GEO Series GSE245129. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Immortalized human choroid plexus endothelial cells enable an advanced endothelial-epithelial two-cell type in vitro model of the choroid plexus
GEO Series GSE198846. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Folic acid supplementation normalizes the endothelial progenitor cell transcriptome of patients with type 1 diabetes
GEO Series GSE17635. Homo sapiens. 32 samples. Type: Expression profiling by array.
H3K27ac changes upon overexpression of the active NOTCH1 intracellular domain (N1ICD) in human adipose tissue endothelial cells.
GEO Series GSE195537. Homo sapiens. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Leukocyte - endothelial cell interaction in infections: the role of IL1, TNF and IFN pathways
GEO Series GSE131590. Homo sapiens. 138 samples. Type: Expression profiling by high throughput sequencing.
RNA velocity objects of FACS-sorted (CD31+/CD45-) endothelial cells of overall merge of pathological entities (brain tumors and brain vascular malformations)
<p><strong>RNA velocity objects (zip files of .h5ad) of FACS-sorted (CD31+/CD45-) endothelial cells of overall merge of pathological entities (brain tumors and brain vascular malformations):<br></strong></p> <p><em><span>-> part of the manuscript: Single-cell atlas of the human brain vasculature across development, adulthood and disease</span></em><span><br><em><span>https://www.nature.com/articles/s41586-024-07493-y</span></em></span></p> <p><br>-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------</p> <p><em>- Overall merge of pathological sorted endothelial cells_RNA velocity.zip:</em> <br> -> this is a zip file of an RNA velocity object (.h5ad) of the overall merge of FACS-sorted (CD31+/CD45-) endothelial cells isolated from pathological entities including brain tumors (lower-grade glioma, high-grade glioma (glioblastoma), brain metastasis, meningiomas) and brain vascular malformations (brain arteriovenous malformations). </p>
seurat objects of unsorted endothelial and perivascular cells - individual entities
<p><strong>Seurat objects of individual entities of unsorted endothelial and perivascular cells<br></strong></p> <p><em><span>-> part of the manuscript: Single-cell atlas of the human brain vasculature across development, adulthood and disease</span></em><span><br><em><span>https://www.nature.com/articles/s41586-024-07493-y</span></em></span></p> <p><strong> </strong></p> <p>-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------</p> <p> </p> <p><em>-i) Fetal CNS unsorted endothelial and perivascular cells_seurat object.rds: </em><br> -> this seurat object is of unsorted endothelial and perivascular cells isolated from fetal brain (Fetal CNS).</p> <p><br><em>-ii) Fetal periphery unsorted endothelial and perivascular cells_seurat object.rds: </em><br> -> this seurat object is of unsorted endothelial and perivascular cells isolated from fetal periphery (Fetal peripheral organs).</p> <p><br><em>- iii) Adult control brain (temporal lobe) unsorted endothelial and perivascular cells_seurat object.rds: </em><br> -> this seurat object is of unsorted endothelial and perivascular cells isolated from adult/control brains (temporal lobes).<br><br><em>- iv) AVM unsorted endothelial and perivascular cells_seurat object.rds: </em><br> -> this seurat object is of unsorted endothelial and perivascular cells isolated from brain arteriovenous malformations (AVM) (a brain vascular malformation).<br><br><em>- v) LGG unsorted endothelial and perivascular cells_seurat object.rds: </em><br> -> this seurat object is of unsorted endothelial and perivascular cells isolated from lower-grade gliomas (LGG) (a brain tumor).<br><br><em>- vi) GBM unsorted endothelial and perivascular cells_seurat object.rds: </em><br> -> this seurat object is of unsorted endothelial and perivascular cells isolated from high-grade gliomas (glioblastoma (GBM)) (a brain tumor).<br><br><em>- vii) MET unsorted endothelial and perivascular cells_seurat object.rds: </em><br> -> this seurat object is of unsorted endothelial and perivascular cells isolated from brain metastasis (MET) (a brain tumor).<br><br><em>- viii) MEN unsorted endothelial and perivascular cells_seurat object.rds: </em><br> -> this seurat object is of unsorted endothelial and perivascular cells isolated from brain meningioma (MEN) (a brain tumor).</p>
Bioinformatical workflow and results for Group B Streptococcal transcriptome when interacting with brain endothelial cells
<p>Bioinformatical workflow and results for the manuscript Group B Streptococcal transcriptome when interacting with brain endothelial cells </p>
ROSMAP meQTL Results for Endothelial cells with regionalpcs and averages
<p>This dataset contains methylation quantitative trait loci (meQTL) results for the following study:</p> <p><strong><em>"regionalpcs improve discovery of DNA methylation associations with complex traits"</em></strong></p> <p>Tiffany Eulalio*<sup>1</sup>, Min Woo Sun<sup>1</sup>, Olivier Gevaert<sup>1</sup>, Michael D. Greicius<sup>2</sup>, Thomas J. Montine<sup>3</sup>, Daniel Nachun*‡<sup>3</sup>, Stephen B. Montgomery*‡<sup>1,3</sup></p> <p>‡ These authors contributed equally as senior authors</p> <p>* Corresponding authors: Tiffany Eulalio (<a href="mailto:eulalio@alumn.stanford.edu">eulalio@alumn.stanford.edu</a>), Daniel Nachun (<a href="mailto:dnachun@stanford.edu">dnachun@stanford.edu</a>), Stephen B. Montgomery (<a href="mailto:smontgom@stanford.edu">smontgom@stanford.edu</a>)</p> <p> Author affiliations:</p> <p>1. Department of Biomedical Data Science, Stanford University, Stanford, CA</p> <p>2. Department of Neurology & Neurological Sciences, Stanford University, Stanford, CA</p> <p>3. Department of Pathology, Stanford University, Stanford, CA</p> <p> </p> <p><strong>Dataset description</strong>:</p> <p>This dataset contains QTL results generated from FastQTL, organized by region type (full gene, gene body, preTSS, and promoters) and summary types (averages and regional principal components).</p> <p><strong>Contents:</strong></p> <ul> <li><strong>Parquet tar files</strong>: These compressed archives contain output files in Parquet format from FastQTL, split by chromosome. <code>parquet1</code> includes chromosomes 1-10, and <code>parquet2</code> includes chromosomes 11-22.</li> <li><strong>cis_qtl_summary_stats.csv</strong>: Provides summary statistics for each phenotype-variant pair, including effect sizes, p-values, TSS distances, and additional details.</li> <li><strong>cis_qtl.signif_pairs.csv</strong>: Contains the significant QTL results identified by FastQTL.</li> <li><strong>cis_qtls.time_to_run.txt</strong>: Reports the running time for FastQTL analysis.</li> <li><strong>cis_qtls.cis_qtl.txt.gz</strong>: Contains comprehensive results for all cis QTLs.</li> </ul> <p>This dataset is intended to support replication and further exploration of QTL associations across different genomic regions and summary methods.</p>
Electronic Hookah and Endothelial Cell Function
ClinicalTrials.gov study NCT04133376. IPD Sharing: UNDECIDED. Countries: 1. Publications: 0.
Endothelial Cell Loss in Pseudophakic Patients Receiving a Paul Glaucoma Drainage Device With Its Tube Inserted in the Anterior Versus Posterior Chamber: a Randomized Controlled Trial
ClinicalTrials.gov study NCT05500469. IPD Sharing: NO. Countries: 1. Publications: 0.
The Role of the Space Environment on Vascular Endothelial and Smooth Muscle Cell Processes
ClinicalTrials.gov study NCT03156257. IPD Sharing: UNDECIDED. Countries: 1. Publications: 0.
Effect of Donor Diabetes and Other Factors on Corneal Transplant Endothelial Cell Loss and Success at 5 Years
ClinicalTrials.gov study NCT07217249. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Sickle Cell Disease and Endothelial Progenitor Cells (EPCs)
ClinicalTrials.gov study NCT00783627. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Glaucoma Drainage Device and Endothelial Cell Loss Compare Trial
ClinicalTrials.gov study NCT05924477. IPD Sharing: NO. Countries: 2. Publications: 0.
Impact of Sarpogrelate in the Function of Endothelial Progenitor Cells
ClinicalTrials.gov study NCT01548274. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Age and Endothelial Progenitor Cell Mobilization
ClinicalTrials.gov study NCT00585949. IPD Sharing: NO. Countries: 1. Publications: 0.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.