Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
11,105
datasets available to search
ShareScore release 0.9.0
Dataset results
11,105 results for “single cells”
Gene expression profile at single cell level of endothelial cells (ECs) from the WT and Apoa1bp-/- mice adductors with femoral artery ligation (FAL) injury
GEO Series GSE279901. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Analyses Elucidate the Cellular and Molecular Landscape of Ulcerative Colitis
GEO Series GSE125527. Homo sapiens. 103 samples. Type: Expression profiling by high throughput sequencing; Other.
Single cell RNA-seq analysis reveals the crucial role of Collagen triple helix repeat containing 1 (Cthrc1) cardiac fibroblasts for ventricular remodeling after myocardial infarction
GEO Series GSE132146. Homo sapiens; Sus scrofa; Mus musculus. 202 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single cell transcriptome of human intrahepatic cholangiocarcinoma
GEO Series GSE181878. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome profiling of the stepwise progression of head and neck cancer
GEO Series GSE181919. Homo sapiens. 37 samples. Type: Expression profiling by high throughput sequencing.
High resolution mapping of the tumor microenvironment using integrated single-cell, spatial and in situ analysis
GEO Series GSE243280. Homo sapiens. 7 samples. Type: Other; Expression profiling by high throughput sequencing.
Analysis of single-cell RNA-seq data from human PBMCs and from in vitro cultures of human cord blood CD34+ progenitors encompassing different DC types
GEO Series GSE115405. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell multiome profiling reveals pancreas cell type-specific gene regulatory programs of type 1 diabetes progression [multiome]
GEO Series GSE273594. Homo sapiens. 8 samples. Type: Other.
Single Cell RNA-Sequencing Identifies Diverse Roles of Epithelial Cells in Idiopathic Pulmonary Fibrosis
GEO Series GSE86618. Homo sapiens. 540 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNAseq analysis (10X Genomics Chromium) of cMAF- and Mafb-deficent lung monocytes and interstium macrophages
GEO Series GSE193891. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA-seq identifies a unique microglia type associated with Alzheimer’s disease
GEO Series GSE98971. Mus musculus. 104 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell analysis of mouse plasmacytoid dendritic cells (pDCs) unravels their activation trajectory and their molecular regulation in vivo during a viral infection [FB5P-seq_kinetic]
GEO Series GSE151245. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA-Seq of Neuroblastoma cell line (CLB-berlud)
GEO Series GSE130022. Homo sapiens. 48 samples. Type: Expression profiling by high throughput sequencing.
Comparative analysis between single-cell RNA-seq and single-molecule RNA FISH indicates that the pyrimidine nucleobase idoxuridine (IdU) globally amplifies transcriptional noise
GEO Series GSE263194. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single cell data from mechanically-loaded muscle
GEO Series GSE232257. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Epigenomics Uncovers Heterochromatin Instability and Transcription Factor Dysfunction during Mouse Brain Aging [snATAC-Seq] [10X Multiome]
GEO Series GSE294772. Mus musculus. 142 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Third-party reanalysis.
Longitudinal single-cell immunoprofiling links durable CAR T response to sustained activation and clonotypic expansion of the native cytotoxic T cell repertoire
GEO Series GSE290722. Homo sapiens. 184 samples. Type: Other; Expression profiling by high throughput sequencing.
Single-cell RNA-seq in a comparative primate skeletal cell culture model [2]
GEO Series GSE181743. Pan troglodytes; Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.
single cell RNA-seq from Purkinje cell (ENCSR828FPS)
GEO Series GSE78463. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
3D chromatin architecture of drug-tolerant cancer cells at single-cell resolution
GEO Series GSE195611. Homo sapiens. 410 samples. Type: Expression profiling by high throughput sequencing; Other; Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.