Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
1,353
datasets available to search
ShareScore release 0.9.0
Dataset results
1,353 results for “single-cell transcriptomics”
Transcriptome profiling in swine macrophages infected with African swine fever virus at single-cell resolution
GEO Series GSE168113. Sus scrofa. 13 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic profling of the aging mouse choroid plexus
GEO Series GSE232782. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell Transcriptomic Landscape of Human Blood Cells
GEO Series GSE149938. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomes reveal a complex cellular landscape in the middle ear and differential capacities for acute response to infection gene expression by cell types in the middle ear
GEO Series GSE146244. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Decoding cellular stress states for toxicology using single-cell transcriptomics [scRNA-Seq]
GEO Series GSE306046. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic Evaluation of a Stress Vulnerability Network Using Single-Cell RNA Sequencing in Mouse Prefrontal Cortex
GEO Series GSE240975. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell transcriptomes and BCR sequences of IgG+ murine memory B cells from Bone Marrow and Spleen
GEO Series GSE140133. Mus musculus. 40 samples. Type: Expression profiling by high throughput sequencing.
Increased transcriptome variation and localised DNA methylation changes in oocytes from aged mice revealed by parallel single-cell analysis [scRNA-seq]
GEO Series GSE154368. Mus musculus. 88 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptome Analysis Reveals Dynamic Cell Populations and Differential Gene Expression Patterns in a Mouse Cerebral Aneurysm Model
GEO Series GSE193533. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics reveals core regulatory programs that determine the heterogeneity of circulating and tissue-resident memory CD8+ T cells
GEO Series GSE181785. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome dynamics in stabilized pituitary gonadotrope cells [bulk_pituitary]
GEO Series GSE111456. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptomic Analysis of mIHC Images via Antigen Mapping
GEO Series GSE160766. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptomes of the Regenerating Intestine Reveal a Revival Stem Cell [part 2]
GEO Series GSE123515. Mus musculus. 192 samples. Type: Expression profiling by high throughput sequencing.
Paired-Tag single-cell joint profiling of H3K27me3-H3K4me1 and transcriptome revealed prenatal e-cigarette induced abnormal neuronal lineage development in rat neonatal prefrontal cortex
GEO Series GSE280559. Rattus norvegicus. 6 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Identification of genomic enhancers through spatial integration of single-cell transcriptomics and epigenomics [FluidigmC1_scATACseq]
GEO Series GSE141580. Drosophila melanogaster. 384 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell transcriptome profiling of the branching epithelium of mouse salivary glands
GEO Series GSE159780. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Recovery and analysis of transcriptome subsets from pooled single-cell RNA-seq libraries
GEO Series GSE119428. Homo sapiens; Mus musculus. 13 samples. Type: Expression profiling by high throughput sequencing.
Increased transcriptome variation and localised DNA methylation changes in oocytes from aged mice revealed by parallel single-cell analysis [scBS-seq]
GEO Series GSE154271. Mus musculus. 80 samples. Type: Methylation profiling by high throughput sequencing.
Single-cell transcriptomic analysis of tissue resident memory T cells in human lung cancer [ATAC-Seq]
GEO Series GSE125858. Homo sapiens. 9 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell transcriptome uncovers heterogeneity and distinct states of ileum between suckling and early-weaning piglets
GEO Series GSE174112. Sus scrofa. 6 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.