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249 results for “3D Structure”
Figure 2 from: Kissling WD, Seijmonsbergen AC, Foppen RPB, Bouten W (2017) eEcoLiDAR, eScience infrastructure for ecological applications of LiDAR point clouds: reconstructing the 3D ecosystem structure for animals at regional to continental scales. Research Ideas and Outcomes 3: e14939. https://doi.org/10.3897/rio.3.e14939
Figure 2 - Generic workflow for object-based image analysis (OBIA) of LiDAR point clouds and proposed ecological applications. A workbench (blue) will be developed to handle the data storage, data exploration, and interactive OBIA of the massive LiDAR point clouds. Combined with datasets of bird distributions, climate, and other remote sensing layers (orange), the LiDAR data will be applied to several ecological case studies, e.g. by using species distribution modelling of birds and insect pollinators (green).
Figure 1 from: Kissling WD, Seijmonsbergen AC, Foppen RPB, Bouten W (2017) eEcoLiDAR, eScience infrastructure for ecological applications of LiDAR point clouds: reconstructing the 3D ecosystem structure for animals at regional to continental scales. Research Ideas and Outcomes 3: e14939. https://doi.org/10.3897/rio.3.e14939
Figure 1 - The vertical and horizontal distribution of plants influences habitat structure and 3D characteristics of vegetation for animals. Illustrated are examples for (a) forests, (b) agricultural and open landscapes, and (c) reedbeds and marshlands. The height, openness and density of vegetation as well as specific habitat features (e.g. tree species, hedges etc.) are key aspects of animal habitat and space use.
Figures 29-31 from: Schmidt J, Michalik P (2017) The ground beetle genus Bembidion Latreille in Baltic amber: Review of preserved specimens and first 3D reconstruction of endophallic structures using X-ray microscopy (Coleoptera, Carabidae, Bembidiini). ZooKeys 662: 101-126. https://doi.org/10.3897/zookeys.662.12124
Figures 29-31 - Bembidion alekseevi sp. n., light microscopic images of the holotype. 29 left dorso-lateral aspect 30 right ventro-lateral aspect 31 general view of the amber piece; the position of the fossil is marked by an arrow.
Figures 27-28 from: Schmidt J, Michalik P (2017) The ground beetle genus Bembidion Latreille in Baltic amber: Review of preserved specimens and first 3D reconstruction of endophallic structures using X-ray microscopy (Coleoptera, Carabidae, Bembidiini). ZooKeys 662: 101-126. https://doi.org/10.3897/zookeys.662.12124
Figures 27-28 - Fossil Bembidion Latreille, 1802, reconstruction of the external shape in dorsal view. 27 B. bukejsi sp. n. 28 B. alekseevi sp. n.
Figures 32-34 from: Schmidt J, Michalik P (2017) The ground beetle genus Bembidion Latreille in Baltic amber: Review of preserved specimens and first 3D reconstruction of endophallic structures using X-ray microscopy (Coleoptera, Carabidae, Bembidiini). ZooKeys 662: 101-126. https://doi.org/10.3897/zookeys.662.12124
Figures 32-34 - Bembidion alekseevi sp. n., volume rendering of the holotype. 32 dorsal aspect 33 right lateral aspect 34 ventral aspect.
Figures 18-26 from: Schmidt J, Michalik P (2017) The ground beetle genus Bembidion Latreille in Baltic amber: Review of preserved specimens and first 3D reconstruction of endophallic structures using X-ray microscopy (Coleoptera, Carabidae, Bembidiini). ZooKeys 662: 101-126. https://doi.org/10.3897/zookeys.662.12124
Figures 18-26 - Aedeagal median lobes and endophallic structures of recent Bembidiina (18–25) and the fossil Bembidion bukejsi sp. n. (26), left lateral view. 18 Hoquedela k. kirschenhoferi Müller-Motzfeld, 1988 19 Bembidion (Phyla) tethys Netolitzky, 1926 20 B. (Plataphus) f. fellmanni Mannerheim, 1823 21 B. (Melomalus) altaicum Gebler, 1833 22 B. (Peryphophila) eurydice Andrewes, 1926 23 B. (Andrewesa) patris Schmidt, 2010 24 B. (Bracteon) lapponicum Zetterstedt, 1828 25 B. (Odontium) striatum Fabricius, 1792 26 B. (Eodontium) bukejsi subgen. n., sp. n. (Fig. 26a, volume rendering with highlighted structures, see also Fig. 14; Fig. 26b, schematic reconstruction of putative organization of endophallic structures). Scale bar: 2.2 mm. Abbreviations: bsc = brush sclerite; bsc-fd-av = apico-ventral prolongation of the brush sclerite; csc = central sclerite; csc-ll = left lobe of central sclerite; csc-rl = right lobe of central sclerite; df = dorsal field; dpl = dorsal plate; fl = flagellum of the central fold system; N = N-sclerite (Maddison 2012); of = ostidial flag.
Figures 14-17 from: Schmidt J, Michalik P (2017) The ground beetle genus Bembidion Latreille in Baltic amber: Review of preserved specimens and first 3D reconstruction of endophallic structures using X-ray microscopy (Coleoptera, Carabidae, Bembidiini). ZooKeys 662: 101-126. https://doi.org/10.3897/zookeys.662.12124
Figures 14-17 - Bembidion bukejsi sp. n., holotype, visualization of endophallic structures using micro-CT. 14 volume rendering of the aedeagal median lobe with sclerotized endophallic structures highlighted in colors 15–16 parts of transverse sections through the abdomen with aedeagus (for position of slices see Fig. 14) 17 sclerotized endophallic structures separated and highlighted in colors using serial sectioning (a-d, left lateral aspect; e, right lateral aspect; f-g, dorsal aspect). Colour coding: beige = internal fold originating from the brush sclerite; green = central sclerite; khaki = dorsal field; light blue = dorsal plate; marine blue = ostidial flag; red = central fold system; white = unknown sclerite; yellow = brush sclerite. Abbreviations: bsc = brush sclerite; bsc-fd-i = internal fold originating from the brush sclerite; bsc-fd-v = ventral prolongation of the brush sclerite; cfd = central folding system; csc = central sclerite; dpl = dorsal plate; mlw = wall of median lobe; scu = unknown sclerite; st = sternite.
Figures 9-13 from: Schmidt J, Michalik P (2017) The ground beetle genus Bembidion Latreille in Baltic amber: Review of preserved specimens and first 3D reconstruction of endophallic structures using X-ray microscopy (Coleoptera, Carabidae, Bembidiini). ZooKeys 662: 101-126. https://doi.org/10.3897/zookeys.662.12124
Figures 9-13 - Bembidion bukejsi sp. n., holotype, volume rendering of selected body parts 9 caudal aspect of body 10 tarsomeres and distal portion of tibia of right proleg. 11 frontal section of body (ventral aspect) showing position of the abdominal segment IX which surrounds the aedeagus 12 abdominal segment IX and aedeagal median lobe, left lateral aspect 13 sagittal section of aedeagal median lobe, left lateral aspect. Abbreviations: antc = antecosta; bow-l = left wall of basal orfice; bsc-fd = folding structures originating from the endophallic brush sclerite; cfd = central folding system of endophallus; csc = central sclerite of endophallus (left lobe); dpl = dorsal plate of endophallus; mla = aedeagal median lobe apex; mlb = aedeagal median lobe base; mlw-d = dorsal wall of median lobe; mlw-v = ventral wall of median lobe; mtg IX = mediotergite IX; omp = ostial microtrichial patch; pm-l = left paramere (basal portion).
Figures 6-8 from: Schmidt J, Michalik P (2017) The ground beetle genus Bembidion Latreille in Baltic amber: Review of preserved specimens and first 3D reconstruction of endophallic structures using X-ray microscopy (Coleoptera, Carabidae, Bembidiini). ZooKeys 662: 101-126. https://doi.org/10.3897/zookeys.662.12124
Figures 6-8 - Bembidion bukejsi sp. n., volume rendering of the holotype. 6 dorsal aspect 7 left lateral aspect 8 ventral aspect.
Figures 3-5 from: Schmidt J, Michalik P (2017) The ground beetle genus Bembidion Latreille in Baltic amber: Review of preserved specimens and first 3D reconstruction of endophallic structures using X-ray microscopy (Coleoptera, Carabidae, Bembidiini). ZooKeys 662: 101-126. https://doi.org/10.3897/zookeys.662.12124
Figures 3-5 - Bembidion bukejsi sp. n., light microscopic images of the holotype. 3 anterior portion of body, dorsal aspect 4 anterior portion of body, ventral aspect 5 left lateral aspect.
Figures 35-36 from: Schmidt J, Michalik P (2017) The ground beetle genus Bembidion Latreille in Baltic amber: Review of preserved specimens and first 3D reconstruction of endophallic structures using X-ray microscopy (Coleoptera, Carabidae, Bembidiini). ZooKeys 662: 101-126. https://doi.org/10.3897/zookeys.662.12124
Figures 35-36 - Bembidion alekseevi sp. n., volume rendering of the head capsule of the holotype using different grayscale thresholds, dorsal aspect. The arrow in Fig. 36 point to the prominent ridge on internal side of the anterior supraorbital pore, which is characteristic for representatives of the Bembidion subgenus Eupetedromus.
Figures 1-2 from: Schmidt J, Michalik P (2017) The ground beetle genus Bembidion Latreille in Baltic amber: Review of preserved specimens and first 3D reconstruction of endophallic structures using X-ray microscopy (Coleoptera, Carabidae, Bembidiini). ZooKeys 662: 101-126. https://doi.org/10.3897/zookeys.662.12124
Figures 1-2 - Bembidion bukejsi sp. n., light microscopic images of the holotype. 1 dorsal aspect 2 general view of the fossil with contours of the amber piece.
3dRNA/DNA: 3D Structure Prediction from RNA to DNA
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Original 3D ED datasets of Co DHG and the integrated merged dataset used for structure determination with molecular replacement.
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The dynamics of tropical storm Mulan-induced destruction in 3D structure and dissipation in kinetic energy of an anticyclonic eddy in the northern South China Sea
<p>dataset for The dynamics of tropical storm Mulan-induced destruction in 3D structure and dissipation in kinetic energy of an anticyclonic eddy in the northern South China Sea</p>
Dataset for 'Favorable trade-off between heat transfer and pressure drop in 3D printed baffled logpile catalyst structures'
<p>This data set was used to generate the results in the paper 'Favorable trade-off between heat transfer and pressure drop in 3D printed baffled logpile catalyst structures', published in Chemical Engineering Research and Design by Leon R.S. Rosseau, Jord T.A. Jansen, Ivo Roghair and Martin van Sint Annaland (https://doi.org/10.1016/j.cherd.2023.06.046).<br> The data is ordered first by configuration, then by gap spacing and finally by relative baffle length (if applicable). The heatrun case folders contain the temperature, wall-heat flux and velocity distributions at steady state with heated walls. The rtdrun case folders contain the pressure and velocity distributions at steady state without heated walls. The E-curve sampling is available as numpy array, as the storage requirements for all of the individual time steps are too high.</p> <p>This data set and the corresponding paper are based on research undertaken in relation to a project (ZEOCAT-3D) which has received funding from the European Union’s Horizon 2020 research and innovation program, under Grant Agreement No. 814548. The authors would like to thank the EU Horizon 2020 program for this opportunity. This publication only reflects the author’s views and neither the funding Agency nor the European Commission are responsible for any use that may be made of the information contained therein.<br> This work made use of the Dutch national e-infrastructure with the support of the SURF Cooperative using grant no. EINF-1478 and grant no. EINF-3116.</p>
Depth inversion with a 3D structure influences brightness perception
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Data and R code for What you see is where you go: visibility influences movement decisions of a forest bird navigating a 3D structured matrix
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Data from: Sequence co-evolution gives 3D contacts and structures of protein complexes
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Dataset for: Numerical simulations of sheared granular materials by 3D DEM for analyzing formation of internal structures and relationship between it and frictional behavior
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ScienceDex guides
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.