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139
datasets available to search
ShareScore release 0.9.0
Dataset results
139 results for “CLIP-seq”
CLIP-Seq for LIN28A or LIN28A loss of function mutant expressing 293FT cells
GEO Series GSE174388. Homo sapiens. 4 samples. Type: Other.
An RNAi Screen of RNA Helicases Identifies eIF4A3 as a Regulator of Embryonic Stem Cell Identity [CLIP-seq]
GEO Series GSE194010. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide identification of snoRNA-guided 2’-O-methylation sites [CLIP-seq]
GEO Series GSE77027. Homo sapiens. 1 samples. Type: Non-coding RNA profiling by high throughput sequencing.
DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome [uvCLAP CLIP-seq]
GEO Series GSE85155. Homo sapiens; Drosophila melanogaster; Mus musculus. 52 samples. Type: Expression profiling by high throughput sequencing; Other.
Genome-wide CRISPR-Cas9 interrogation of splicing networks reveals a mechanism for recognition of autism-misregulated neuronal microexons [CLIP-seq]
GEO Series GSE112598. Mus musculus. 15 samples. Type: Other.
CLIP-seq of Csrp1 in mouse embryoid bodies of day 9
GEO Series GSE226213. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
PBRM1 bromodomains associate with RNA to facilitate chromatin association (CLIP-seq)
GEO Series GSE221619. Homo sapiens. 7 samples. Type: Other.
Discovery of a global translation activator in Pseudomonas aeruginosa [CLIP-Seq]
GEO Series GSE298077. Pseudomonas aeruginosa. 18 samples. Type: Other.
CLIP-seq of E. coli YhgF
GEO Series GSE198953. Escherichia coli str. K-12 substr. MG1655. 6 samples. Type: Other.
Enhanced CLIP-Seq (eCLIP-Seq) of FLAG-tagged wild-type and mutant MYC in U2OS-MYC-KO-MYC-Tet-On cells
GEO Series GSE273775. Homo sapiens. 18 samples. Type: Other.
CLIP-Seq of ZCCHC14 binding sites in HAV infected cells
GEO Series GSE192599. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
The minimal ProQ protein of Neisseria meningitidis is a global RNA-binding protein that operates in parallel with Hfq [CLIP-Seq]
GEO Series GSE129866. Neisseria meningitidis 8013. 4 samples. Type: Expression profiling by high throughput sequencing.
DGCR8 HITS-CLIP reveals novel functions for the Microprocessor (CLIP-seq)
GEO Series GSE39086. Homo sapiens. 4 samples. Type: Non-coding RNA profiling by high throughput sequencing.
SIRT7-dependent deacetylation of the U3-55k protein controls pre-rRNA processing [CLIP-Seq]
GEO Series GSE76578. Homo sapiens. 3 samples. Type: Other.
LIN28 Promotes Nucleolar Phase Separation to Regulate the ES/2C State Homeostasis in Pluripotent Stem Cells [CLIP-seq]
GEO Series GSE164238. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
CLIP-seq of S. cerevisiae Drn1-TAP and Dbr1-TAP
GEO Series GSE44959. Saccharomyces cerevisiae. 4 samples. Type: Expression profiling by high throughput sequencing.
Integrative genome-wide analysis reveals cooperative regulation of alternative splicing by hnRNP proteins (CLIP-Seq)
GEO Series GSE34993. Homo sapiens. 15 samples. Type: Expression profiling by high throughput sequencing.
Nuclear 2′-O-methylation regulates RNA splicing through its binding protein FUBP1 (CLIP-seq and PAR-CLIP)
GEO Series GSE294793. Homo sapiens. 14 samples. Type: Other.
Target discrimination in nonsense-mediated mRNA decay requires Upf1 ATPase activity (CLIP-Seq)
GEO Series GSE69584. Homo sapiens. 6 samples. Type: Other.
NOVA1-CLIP in cortex, midbrain and cerebellum of NOVA1hu/hu mice and NOVA1wt/wt mice [CLIP-Seq]
GEO Series GSE253296. Mus musculus. 18 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.