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2,721 results for “Connectivity”
Rediscovery Datasets: Connecting Duplicate Reports of Apache, Eclipse, and KDE
<p>We present three defect rediscovery datasets mined from Bugzilla. The datasets capture data for three groups of open source software projects: Apache, Eclipse, and KDE. The datasets contain information about approximately 914 thousands of defect reports over a period of 18 years (1999-2017) to capture the inter-relationships among duplicate defects. </p> <p><strong>File Descriptions</strong></p> <ul> <li>apache.csv - Apache Defect Rediscovery dataset</li> <li>eclipse.csv - Eclipse Defect Rediscovery dataset</li> <li>kde.csv - KDE Defect Rediscovery dataset</li> </ul> <p> </p> <ul> <li>apache.relations.csv - Inter-relations of rediscovered defects of Apache</li> <li>eclipse.relations.csv - Inter-relations of rediscovered defects of Eclipse</li> <li>kde.relations.csv - Inter-relations of rediscovered defects of KDE</li> </ul> <p> </p> <ul> <li>create_and_populate_neo4j_objects.cypher - Populates Neo4j graphDB by importing all the data from the CSV files. Note that you have to set dbms.import.csv.legacy_quote_escaping configuration setting to false to load the CSV files as per https://neo4j.com/docs/operations-manual/current/reference/configuration-settings/#config_dbms.import.csv.legacy_quote_escaping</li> <li>create_and_populate_mysql_objects.sql - Populates MySQL RDBMS by importing all the data from the CSV files</li> <li>rediscovery_db_mysql.zip - For your convenience, we also provide full backup of the MySQL database</li> </ul> <p> </p> <ul> <li>neo4j_examples.txt - Sample Neo4j queries</li> <li>mysql_examples.txt - Sample MySQL queries</li> <li>rediscovery_eclipse_6325.png - Output of Neo4j example #1</li> </ul> <p> </p> <ul> <li>distinct_attrs.csv - Distinct values of bug_status, resolution, priority, severity for each project</li> </ul>
Amygdala/Thalamus and Amygdala/Cortex connectivity
<p>This dataset includes amygdala segmentation and tractography results from the first 50 subjects (28 female, age 22–35 years, mean 30 years) from the WU-Minn HCP Data-80 unrelated subjects release in the human connectome database (http://humanconnectome.org) [Van Essen et al., 2013].</p> <p>This dataset accompanies the publication "Deconstructing White Matter Connectivity of Human Amygdala Nuclei with Thalamus and Cortex Subdivisions In Vivo"</p>
Mountain landscape connectivity and subspecies appurtenance shape genetic differentiation in natural plant populations of the snapdragon (Antirrhinum majus L.)
<p>This dataset provides the raw data for the population genetic analyses for the article: "Mountain landscape connectivity and subspecies appurtenance shape genetic differentiation in natural plant populations of the snapdragon (Antirrhinum majus L.)" by Benoit Pujol; Juliette Archambeau; Aurore Bontemps; Mylène Lascoste; Sara Marin; and Alexandre Meunier found in the journal "Botany Letters", Vol 164 pp. 111-119 (DOI: 10.1080/23818107.2017.1310056).</p> <p>Link to journal open access article: http://www.tandfonline.com/doi/pdf/10.1080/23818107.2017.1310056</p> <p>Link to Zenodo article reporsitory: https://zenodo.org/record/801169</p> <p>The datafile includes three data sheets:</p> <p>Data, which contains for each plant : the name of the population, the name of the sampled individual, the subspecies, the latitude of the population, the longitude of the population, the altitudinal elevation of the population in meters, and the microsatellite genotype of each plant. Genotype data is recorded by locus (two columns for the two alleles at one locus). Locus name is found as the title of the column. The record for each allele is its allele size.</p> <p>valleys 1 and valleys 2, which contains the association between populations and valleys following the two scenarios that we analyzed in the paper.</p> <p>Microsatelite loci were developed during previous work: see the following paper for more details: Debout, G., E. Lhuillier, P.-J. Malé, B. Pujol, and C. Thébaud. 2012. Development and characterization of 24 polymorphic microsatellite loci in two Antirrhinum majus subspecies (Plantaginaceae) using pyrosequencing technology. Conservation Genetics Resources 4:75-79.</p>
Eco-hydrology Cikapundung Project: citation connections and research profile building
<p>This image is uploaded as an integrated part of Eco-Hydrology Cikapundung project. This image will be cited across all future publications related to this project as CC-BY image. Therefore it should not be treated as prior publication of any kind.</p> <p>We used www.Draw.io and the source code is available on GIthub (https://github.com/dasaptaerwin/CikapundungProject/blob/master/citationConnection.xml).</p> <p>---<br> Dokumen ini disusun sebagai pelengkap riset untuk menggambarkan kaitan sitasi antar dokumen dari hulu ke hilir. Setiap dokumen diupayakan ber-DOI agar dapat <em>autosync</em> dengan profil riset yang tersedia: Google Scholar, Sinta, ORCID. Dengan dibuatnya dokumen hubungan sitasi ini, maka diharapkan dapat menjelaskan bahwa tidak terjadi duplikasi dalam publikasi.</p>
Stochastic modeling of sediment connectivity for reconstructing sand fluxes and origins in the unmonitored Se Kong, Se San, and Sre Pok tributaries of the Mekong River
<p>Sediment supply to rivers, subsequent fluvial transport, and the resulting connectivity on network-scales are often sparsely monitored or subject to major uncertainty. Hence, we propose to adopt stochastic modeling approaches for studying network sediment connectivity. We demonstrate such a stochastic approach for modeling sand connectivity in the major, poorly monitored Se Kong, Se San, and Sre Pok (3S) tributaries of the Mekong River. Specifically, we run many random initializations of the CASCADE modeling framework for sediment connectivity in a Monte Carlo approach in order to quantify how unknown properties of sediment sources translate into uncertainty regarding network sediment connectivity. We identify a reduced ensemble of model realizations that reproduces downstream observations of sediment transport. This ensemble presents an inverse stochastic approximation of the spatial distribution, magnitude, and variability of transport capacity, sediment flux, and bed material grain size in the entire network (i.e., upscaling point observations to the entire network). The approximated magnitude of sediment flux in each tributary is controlled by reaches of low transport capacity (“bottlenecks”). These “bottlenecks” limit the ability of the inverse stochastic approximation to predict sediment transport in the upper parts of the catchment but they allow a clear partitioning of sand deliveries from the 3S to the Mekong, with the Se Kong delivering less (1.9 Mt/yr) and coarser (median grain size: 0.4 mm) sand than the Se San (5.3 Mt/yr, 0.22 mm) and Sre Pok (11 Mt/yr, 0.19 mm).</p>
Taxonomy for Connected Cooperative and Automated Mobility (CCAM)
<p>As part of the FAME project this taxonomy has been created with its main goal to establish a standardized and harmonized classification system for CCAM-related terms, enhancing the comparability, complementarity, and expansion of research, development, and testing in the world of CCAM-enabled solutions and services. Due to its strong links with the EU-CEM handbook multiple terms from the Common Evaluation Methodology (CEM) have been included. The taxonomy is publicly available via the knowledge base and can be accessed here; <a title="Taxonomy for Connected Cooperative and Automated Mobility (CCAM)" href="https://taxonomy.connectedautomateddriving.eu/">https://taxonomy.connectedautomateddriving.eu/</a></p> <p> </p>
The road to success and the fences to be crossed: Considering multiple infrastructure in landscape connectivity modelling (Dataset and script)
<p>Linear infrastructure represent a barrier to movement for many species, reducing the connectivity of the landscapes in which they reside. Of all linear infrastructure, roads and fences are two of the most ubiquitous, and are understood to reduce landscape connectivity for wildlife. However, what is often neglected consideration is a holistic approach of modelling the effects of multiple types of linear infrastructure simultaneously. Few studies have examined this, typically assessing the impacts of a singular kind of infrastructure on landscape connectivity. Therefore, the aim of this study is to address the relative importance of considering multiple kinds of linear infrastructure in landscape connectivity modelling. We utilised presence data of red deer <em>Cervus elaphus</em> and wild boar <em>Sus scrofa</em> in Doñana Biosphere Reserve (Spain) to generate a sequential approach of scenarios of landscape connectivity; firstly only with environmental variables, secondly with roads as the sole infrastructure, thirdly with the addition of fences, and finally with the further addition of fences and wildlife road-crossing structures. We found that the connectivity of the landscape was greatly affected by the addition of fences and wildlife road-crossing structures in both species, with fences in particular causing considerable alterations to estimated movement pathways. Our finding impresses a need to consider multiple different types of linear infrastructure when modelling landscape connectivity to enable a more realistic view of wildlife movement and inform mitigation and conservation measures more accurately.</p>
Figure 16. Connection between subapical and apical dots grading system. 0 in A morphological and mtDNA analysis of the badlands tiger beetle, Cicindela (s. str.) decemnotata Say, 1817 (Coleoptera: Carabidae: Cicindelinae) with the description of three new subspecies C. Barry Knisley
Figure 16. Connection between subapical and apical dots grading system. 0 to 3 refers to connection between sub apical dot and apical dot: A. 0 (widely separate). B. 1 (separate). C. 2 (thin connection). D. 3 (broadly connected).
Underlying dataset for battery pack degradation - Understanding aging in parallel-connected lithium-ion batteries under thermal gradients
<p>This record constitutes the raw data underlying the paper "<i>Battery pack degradation - Understanding aging in parallel-connected lithium-ion batteries under thermal gradients</i>" (<a href="https://www.researchsquare.com/article/rs-2535223/v1">preprint link</a>)</p><p>The dataset contains all raw data, processed data and analysis codes used to generate figures in the publication. Abstract is as follows:</p><blockquote><p>Practical lithium-ion battery systems require parallelisation of tens to hundreds of cells, however understanding of how pack-level thermal gradients influence lifetime performance remains a research gap. Here we present an experimental study of surface cooled parallel-string battery packs (temperature range 20-45 °C), and identify two main operational modes; convergent degradation with homogeneous temperatures, and (the more detrimental) divergent degradation driven by thermal gradients. We attribute the divergent case to the, often overlooked, cathode impedance growth. This was negatively correlated with temperature and can cause positive feedback where the impedance of cells in parallel diverge over time; increasing heterogeneous current and state-of-charge distributions. These conclusions are supported by current distribution measurements, decoupled impedance measurements and degradation mode analysis. From this, mechanistic explanations are proposed, alongside a publicly available aging dataset, which highlights the critical role of capturing cathode degradation in parallel-connected batteries; a key insight for battery pack developers.</p></blockquote>
F I G U R E 4 in Phylogeography of Solomon Islands blossom bats reflects oceanic divides and Pleistocene connections
F I G U R E 4 (a) Phylogenetic tree of Tribe Melonycterini blossom bats produced using the quartet-based method implemented in SVDǪUARTETS, and (b) phylogenetic network of Nesonycteris blossom bats created using SPLITSTREE.
F I G U R E 2 in Phylogeography of Solomon Islands blossom bats reflects oceanic divides and Pleistocene connections
F I G U R E 2 Phylogeographic relationships among Melonycterini blossom bats (a) the Solomon Islands archipelago with bathymetric depths less than 120 m (ETOPO1, Amante & Eakins, 2009) shaded in dark grey to indicate possible land bridge connections during the Last Glacial Maximum. Islands shaded in colour represent those sampled for this study, samples were unavailable for islands shaded in light grey (EPSG: 4326–WGS 84). (b) Phylogenetic tree made using maximum likelihood methods in RAXML depicting relationships among all Nesonycteris and Melonycteris samples. Values indicate maximum likelihood bootstrap support and black circles on nodes denote values = 100. (c) Representation of the taxonomic treatment of Nesonycteris prior to this study comprising two species; (d) Alternate taxonomic treatment of Nesonycteris from the results of this study comprising four species (N. far = N. fardoulisi, N. mac = N. maccoyi); The results of STRUCTURE analyses for various datasets are presented as (e) Dataset 1, a single run, k = 4; (f) Dataset 2, a single run, k = 2; (g) Dataset 3, a single run, k = 3; and (h) Dataset 4 (five runs R1–R5, k = 4). In STRUCTURE results (e–h), each bar indicates the probability of assignment to different genetic clusters.
F I G U R E 3 in Phylogeography of Solomon Islands blossom bats reflects oceanic divides and Pleistocene connections
F I G U R E 3 Pairwise Nei's genetic distances for Melonycteris and Nesonycteris blossom bats from the Solomon Islands and Bismarck archipelagos. Nei's genetic distance was calculated using the R package StAMPP. Values surrounded by a yellow or green rectangle are pairwise distances between samples from New Georgia group islands, and Greater Bukida islands, respectively.
Heterogeneity of synaptic connectivity in the fly visual system
<p>Source data of the paper Cornean, Molina-Obando et al. 2024, Nature Communications. This work contains an analysis of synaptic connectivity in the Drosophila system, focusing on the presynaptic circuitry of three medulla interneurons, Tm9, Tm1, and Tm2.<br>Synaptic connectivity was analyzed using the FAFB dataset (Zheng et al. 2018 Cell) and the Flywire connectome (Schlegel et al. 2023 bioRxiv, Dorkenwald et al. 2023 bioRxiv), as well as expansion microscopy. This analysis is supplement by some functional analysis using in vivo 2-photon calcium imaging. <br><br>Connectomics data used for this study are provided as .xlsx and .text files containing raw and processed data. <br>Expansion microscopy are uploaded as .tiff files containing raw data, as well as .nrrd and .csv files containing processed data.<br>Calcium imaging data are provided at .mat files containing both raw and processed data, as well as .xml files with information about the experimental protocol.</p><p>Please find all relevant information to use the code in the README files.</p><p>The code to analyze the data, either written in Matlab or Python, is found at https://github.com/silieslab/Cornean_Molina-Obando_etal_2024.git</p>
Data for "Disrupted connectivity within a metapopulation of a wind-pollinated declining conifer Taxus baccata L."
<p>A spreadsheet contains microsatellite genotypes and population coordinates necessary for estimating seed and pollen migration rates. In addition, a spreadsheet contains detailed individual data necessary for parentage analysis.</p> <p>For more details, see:</p> <p>Chybicki IJ, Robledo-Arnuncio JJ, Bodziarczyk J, Widlak M, Meyza, K, Oleksa A, Ulaszewski B (2024) Disrupted connectivity within a metapopulation of a wind-pollinated declining conifer, Taxus baccata L. Forest Ecosystems 100240 (https://www.sciencedirect.com/science/article/pii/S2197562024000769)</p>
Rare, long-distance dispersal underpins genetic connectivity in the pink sea fan, Eunicella verrucosa
<p>Characterising patterns of genetic connectivity in marine species is of critical importance given the anthropogenic pressures placed on the marine environment. For sessile species, population connectivity can be shaped by many processes, such as pelagic larval duration, oceanographic boundaries, and currents. This study combines restriction-site associated DNA sequencing (RADseq) and passive particle dispersal modelling to delineate patterns of population connectivity in the pink sea fan, <em>Eunicella verrucosa, </em>a temperate octocoral. Individuals were sampled from 20 sites covering most of the species' northeast Atlantic range, and a site in the northwest Mediterranean Sea to inform on connectivity across the Atlantic-Mediterranean transition. Using 7,510 neutral SNPs, a geographic cline of genetic clusters was detected, partitioning into: Ireland, Britain, France, Spain (Atlantic), and Portugal and Spain (Mediterranean). Evidence of significant inbreeding was detected at all sites, a finding not detected in a previous study of this species based on microsatellite loci. Genetic connectivity was characterised by an isolation by distance pattern (IBD) (<em>r<sup>2</sup></em> = 0.78, <em>p</em><0.001), which persisted across the Mediterranean-Atlantic boundary. In contrast, exploration of ancestral population assignment using the program ADMIXTURE indicated genetic partitioning across the Bay of Biscay, which we suggest represents a natural break in the species' range, possibly linked to a lack of suitable habitat. As the pelagic larval duration (PLD) is unknown, passive particle dispersal simulations were run for 14 and 21 days. For both modelled PLDs, inter-annual variations in particle trajectories suggested that in a long-lived, sessile species, range-wide IBD is driven by rare, longer dispersal events which act to maintain gene flow. These results suggest that oceanographic patterns may facilitate range-wide stepping-stone genetic connectivity in <em>E. verrucosa</em>, and highlight that both oceanography and natural breaks in a species' range should be considered in the designation of ecologically coherent MPA networks.</p>
Operating diagram of hatching module in Zoug jars, this system consists of a 300-litre temperature-controlled isothermal enclosure containing 10 one-litre Zoug jars, each able to accommodate several hundred eggs. An ascending current holds the eggs in suspension and carries the larvae to the surface. Another bottle connected to this device collects the larvae. The water circulating in the jars is independent of that used in the filtration circuit. A cooling unit and UV sterilizer complete the installation. in Reproduction of Zingel asper (Linnaeus, 1758) in controlled conditions: an assessment of the experiences realized since 2005 at the Besançon Natural History Museum
Operating diagram of hatching module in Zoug jars, this system consists of a 300-litre temperature-controlled isothermal enclosure containing 10 one-litre Zoug jars, each able to accommodate several hundred eggs. An ascending current holds the eggs in suspension and carries the larvae to the surface. Another bottle connected to this device collects the larvae. The water circulating in the jars is independent of that used in the filtration circuit. A cooling unit and UV sterilizer complete the installation.
Top view of DR1/DR2 double riffle, each section contains a spawning ground made up of eight gravel-filled trays, a rest area. The "double riffle" was designed to accommodate two groups from 25 to 50 specimens of broodstock in strictly identical conditions. The spawning grounds are equipped with waterproof, motion-sensing cameras with infrared night vision, connected to a 1000 Gb recorder. The diurnal and nocturnal activities of the two groups can therefore be simultaneously recorded over a long period. in Reproduction of Zingel asper (Linnaeus, 1758) in controlled conditions: an assessment of the experiences realized since 2005 at the Besançon Natural History Museum
Top view of DR1/DR2 double riffle, each section contains a spawning ground made up of eight gravel-filled trays, a rest area. The "double riffle" was designed to accommodate two groups from 25 to 50 specimens of broodstock in strictly identical conditions. The spawning grounds are equipped with waterproof, motion-sensing cameras with infrared night vision, connected to a 1000 Gb recorder. The diurnal and nocturnal activities of the two groups can therefore be simultaneously recorded over a long period.
CoCar NextGen: a Multi-Purpose Platform for Connected Autonomous Driving Research
<p>Sample sensor data and vehicle information of our autonomous research vehicle CoCar NextGen.</p> <p>This repository contains a short sequence of sample data from all sensors (except radar) of our research platform. The data is collected in a ROSBag. Additionally, sensor postions are provided in a URDF file. Finally, basic vehicle parameters are given in a YAML file.</p>
Connection - The First Historic Photographic Art Masterpiece on AI
<p><em>Connection, </em>the First Visionary Artwork of Artificial Intelligence.</p> <p>Connection is a groundbreaking photographic work created in 2011, by the french artist N.P. , both conceptually and historically, that stands as the first artistic exploration of the profound philosophical, existential, and ethical questions surrounding artificial intelligence. Created more than a decade before the advent of ChatGPT and the widespread discourse on AI’s societal implications, this visionary piece foresaw the critical dialogue that would emerge between humanity and the intelligent systems it creates.</p> <p> </p> <p>The Process: An Act of Disappearance</p> <p>The creation of Connection is itself an act of profound metaphorical resonance. The artist, who endures the daily constraints of a physically dysfunctional body, performed an intensely physical act during the long exposure process of the photograph. Through continuous, deliberate motion, the artist erased their own presence from the final image, leaving only the traces of energy, light, and movement behind. This disappearance is not merely technical—it is philosophical. The artist’s vanishing within the act of creation evokes a haunting parallel: as humanity breathes life into superintelligent systems, it may one day witness its own obsolescence, much as the artist’s physical form is subsumed by the ephemeral flow captured in the image.</p> <p> </p> <p>The work thus operates on multiple levels: as a profoundly personal act of endurance, as a meditation on the fragility of human existence, and as a prophetic statement on the relationship between creator and creation.</p> <p> </p> <p>A Metaphor for Humanity and Artificial Intelligence</p> <p>Connection serves as a visual and conceptual metaphor for humanity’s pursuit of superintelligence. Just as the artist vanishes within the act of creation, humanity’s drive to engineer machines of unprecedented capability raises questions about the long-term implications for the Homo sapiens sapiens species. Could the very act of creating an intelligence greater than our own lead to humanity’s symbolic, or even literal, disappearance? This work prefigures the ethical dilemmas and existential risks posed by the rise of artificial intelligence, embedding them within a singular aesthetic statement years before these concerns entered mainstream awareness.</p> <p> </p> <p>The Visual Language of Connection</p> <p>The composition of Connection reflects a synthesis of order and chaos, evoking both the structured pathways of neural networks and the unpredictable dynamism of organic life. The image appears simultaneously timeless and forward-looking, embodying the energy flows and fractal repetitions found in both biological systems and AI architectures. It is an invitation to consider the continuity between human creativity and algorithmic processes, suggesting a shared language of pattern and complexity that transcends the boundaries of biology and computation.</p> <p> </p> <p>A Historic and Pioneering Artwork</p> <p>Connection is more than a photograph; it is a declaration of artistic and intellectual foresight. As the earliest known artistic exploration of the intersection between human creativity and artificial intelligence, this work occupies a unique place in art history. It predates not only the public awareness of AI but also the technological frameworks, such as large language models, that now define our contemporary moment. In this sense, Connection is both prophetic and timeless, a rare achievement that anticipates the central questions of our era while remaining deeply rooted in the enduring struggles of the human condition.</p> <p> </p> <p>Enduring Legacy</p> <p>Through its pioneering vision, Connection challenges us to reflect on the future of human identity in a world increasingly shaped by its creations. It speaks to collectors, scholars, and thinkers across disciplines—art, technology, and philosophy—inviting them to engage with its layers of meaning. As both an artistic and historical artifact, Connection marks the beginning of a vital conversation, one that will define the trajectory of human and artificial intelligence relations for generations to come.</p>
Country-ocean-moisture-flows-reconciled-with-ERA5-reanalysis obtained processing Lagrangian moisture connections
<p>The dataset "Reconciled global atmospheric moisture flows between countries/oceans and subcontinents" presents tracked volumes of precipitation and evaporation reconciled with reanalysis data, closing the annual hydrological balance, and provides robust estimates of terrestrial moisture recycling and net moisture flows to support global water governance analysis.</p> <p>This repository is supplement to a study by De Petrillo & Fahrländer et al. (2025), which describes the development of the reconciliation framework, includes a perfromance analysis of the method and shows an exemplary case study on the published data. </p> <p>The atmospheric moisture flows are sourced from the UTrack atmospheric moisture flow dataset by Tuinenburg et al. (2020a) (dataset access: Tuinenburg et al., 2020b) and reconciled with ERA5 precipitation and evaporation data (Hersbach et al., 2020) on the mean annual basis in the period 2008-2017, by means of a post-processing framework, based on the Iterative Proportional Fitting (IPF) algorithm.</p> <p>NOTE: The final dataset is available in form of bilateral matrices (country/ocean and subcontinent/ocean) and in form of direct flows (flow edges). Supporting material to read the dataset is in the folder "List" . Processed ERA5 data (where the precipitation-evaporation annual balance is met) and input data to generate the figures are also available.</p> <p>References:</p> <p>De Petrillo, E., Fahrländer, S., Tuninetti, M., Andersen, L.S., Monaco, L., Ridolfi, L., Laio, F. (2025). Reconciling tracked atmospheric moisture flows to close the global freshwater cycle.<em> </em><em>Commun Earth Environ <strong>6</strong>, 347 (2025). </em><a href="https://doi.org/10.1038/s43247-025-02289-y">https://doi.org/10.1038/s43247-025-02289-y</a></p> <p>Tuinenburg, O. A., Theeuwen, J. J. E., & Staal, A. (2020a). High-resolution global atmospheric moisture connections from evaporation to precipitation. <em>Earth System Science Data</em>, <em>12</em>(4), 3177–3188. <a href="https://doi.org/10.5194/essd-12-3177-2020">https://doi.org/10.5194/essd-12-3177-2020</a></p> <p>Tuinenburg, O. A., Theeuwen, J. J. E., Staal, A. (2020b): Global evaporation to precipitation flows obtained with Lagrangian atmospheric moisture tracking. PANGAEA, <a href="https://github.com/ObbeTuinenburg/UTrack_global_database">https://doi.pangaea.de/10.1594/PANGAEA.912710</a></p> <p>Hersbach, H., Bell, B., Berrisford, P., Hirahara, S., Horányi, A., Muñoz‐Sabater, J., et al. (2020). The ERA5 global reanalysis. <em>Quarterly Journal of the Royal Meteorological Society</em>, <em>146</em>(730), 1999–2049. <a href="https://doi.org/10.1002/qj.3803">https://doi.org/10.1002/qj.3803</a></p> <p> </p> <p> </p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.