Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
294
datasets available to search
ShareScore release 0.9.0
Dataset results
294 results for “Gene Sets”
Gene expression profile of breast cancer cell line MDA-MB-231 xenograft - discovery set
GEO Series GSE188893. Homo sapiens. 23 samples. Type: Expression profiling by array.
CPI203, a BET inhibitor, down-regulates a consistent set of DNA synthesis genes across a wide array of glioblastoma lines [RNA-seq]
GEO Series GSE290923. Homo sapiens. 156 samples. Type: Expression profiling by high throughput sequencing.
Changes in gene expression when expressing two sets of t(6;11) fusion proteins
GEO Series GSE175573. Homo sapiens. 21 samples. Type: Expression profiling by high throughput sequencing.
Loss of TET2 results in gene expression represssion in mouse GC B-cells and lymphoma cells (RNA-Seq data set)
GEO Series GSE111697. Mus musculus. 14 samples. Type: Expression profiling by high throughput sequencing.
Global transcriptional response of Methylorubrum extorquens to formaldehyde stress includes both overlapping and unique gene sets in comparison to antibiotic translational inhibition and expands the r
GEO Series GSE163955. Methylorubrum extorquens. 81 samples. Type: Expression profiling by high throughput sequencing.
Gene expression profiles of human hepatocellular carcinoma (training set 2)
GEO Series GSE45434. Homo sapiens. 16 samples. Type: Expression profiling by array; Third-party reanalysis.
Proliferating microglia integrate regulation of a core set of cell cycle genes with broader, context-dependent transcriptional programs
GEO Series GSE166236. Mus musculus. 46 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
The Ciona notochord transcriptome reveals a core set of broadly conserved notochord effector genes
GEO Series GSE95333. Ciona intestinalis. 12 samples. Type: Expression profiling by high throughput sequencing.
Gene expression profiling of myxoid liposarcomas (training set INT-A)
GEO Series GSE55464. Homo sapiens. 12 samples. Type: Expression profiling by array.
Interferon inhibits a model RNA virus via a limited set of inducible effector genes [RNA-seq]
GEO Series GSE233003. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide analysis of gene expression profiles in individuals infected with the Human T-Lymphotropic virus Type 1 (HTLV-1) - test set
GEO Series GSE29332. Homo sapiens. 35 samples. Type: Expression profiling by array.
The Fur Pan-regulon in E. coli shows diversity in strain-specific sets of target genes
GEO Series GSE150240. Escherichia coli; Escherichia coli K-12; Escherichia coli O157:H7; Salmonella enterica. 36 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Transcriptome RNA Sequencing Data Set of Differential Gene Expression in Escherichia Coli BW25113 SlyA Wild Type and Mutant Strains
GEO Series GSE168963. Escherichia coli. 16 samples. Type: Expression profiling by high throughput sequencing.
Two separate roles for the transcription coactivator SAGA and a set of genes redundantly regulated by TFIID and SAGA [RNA]
GEO Series GSE133004. Saccharomyces cerevisiae. 60 samples. Type: Expression profiling by high throughput sequencing.
Arabidopsis Flower and Embryo Developmental Genes are Repressed in Seedlings by Different Combinations of Polycomb Group Proteins in Association with Distinct Sets of Cis-regulatory Elements
GEO Series GSE67322. Arabidopsis thaliana. 29 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Mutational analysis of progesterone receptor delineates different sets of regulated genes
GEO Series GSE11888. Homo sapiens. 25 samples. Type: Expression profiling by array.
Inflammatory gene profiling of Ewing sarcoma family of tumors (set A)
GEO Series GSE17618. Homo sapiens. 55 samples. Type: Expression profiling by array.
Two separate roles for the transcription coactivator SAGA and a set of genes redundantly regulated by TFIID and SAGA [RNA-Seq]
GEO Series GSE142182. Saccharomyces cerevisiae. 11 samples. Type: Expression profiling by high throughput sequencing.
Effect of SET knock down on human osteosarcoma cell line HOS gene expression
GEO Series GSE235621. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Iterative transcription factor screening enables rapid generation of microglia-like cells from human iPSC - First round of pooled screening identified an initial set of TFs for inducing microglia gene
GEO Series GSE287847. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.