Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
248
datasets available to search
ShareScore release 0.9.0
Dataset results
248 results for “Plant phylogenetics”
Figure S2 in Supplementary Materials for Precipitation is the main axis of tropical plant phylogenetic turnover across space and time
Figure S2. Overview and results of the orthology assessment workflow.
Figure S35 in Supplementary Materials for Precipitation is the main axis of tropical plant phylogenetic turnover across space and time
Figure S35. Mimosoid taxon and genus richness per half degree latitude/longitude grid cell.
Figure S3 in Supplementary Materials for Precipitation is the main axis of tropical plant phylogenetic turnover across space and time
Figure S3. Overview of species tree inference workflow with ASTRAL-3.
Environment differentially affects the functional and phylogenetic structures of plant communities in a dry evergreen Afromontane tropical forest
<p class="MsoNormal"><span>Testing how local environmental conditions influence plant community assembly is important to understand the underlying mechanisms that promote and/or maintain biodiversity. Functional traits are used to find the broad spectrum of resource use strategies that plants use to</span><span> respond to environmental variation</span><span>. The patterns and drivers of plant community assembly through the lens of traits and phylogeny, however, remain to be studied in a uniquely biodiversity rich but poorly known fragmented dry Afromontane forest of Ethiopia. Here, we combined trait and community phylogenetic data from thirty sampling plots of 20 × 20 m size to determine the functional and phylogenetic structures and their drivers in a fragmented, human-dominated dry evergreen Afromontane forest. We found phylogenetic and functional clustering of plants in which the effect of environment was found to be trait specific. A weak phylogenetic signal for traits was detected suggesting that species resource use strategies may not be inferred using species phylogenetic distance. Additionally, we found functional traits to be weak in predicting species abundance distribution. Overall, while this study shows a non-random community assembly pattern, it also highlights the importance of deterministic processes being trait specific. </span></p>
Spatial patterns of phylogenetic and species diversity of Fennoscandian vascular plants in protected areas
<p>Protected areas are one of the main strategic means for conserving biodiversity. Yet, the design of protected areas usually neglects phylogenetic diversity, an important diversity measure. In this paper, we assess the phylogenetic diversity and species richness of vascular plants in Fennoscandian protected areas. We evaluate how much species richness and phylogenetic diversity is found within and outside protected areas, and the differences in diversity between different categories of protected areas. We also assess the differences in the diversity-area relationship of the different protected area categories in terms of both species richness and phylogenetic diversity. We build a multi-locus phylogeny of 1,519 native vascular plants of Norway, Sweden, and Finland. We estimate the phylogenetic diversity and species richness by combining the phylogeny with publicly available occurrence data and the currently protected area system of Fennoscandia. Our results indicate that protected areas in Fennoscandia hold more diversity when larger, and that phylogenetic diversity increases faster with area than species richness. We found evidence for more diversity outside of protected areas of the different countries of Fennoscandia than inside of protected areas, but no evidence for diversity differences between areas with different protection status. Hence, our results indicate that the current protected area system in Fennoscandia is no more effective in conserving phylogenetic diversity and species richness of vascular plants than a random selection of localities. Our results also indicate that planning conservation strategies around phylogenetic diversity, rather than species richness, might be more effective in protecting vascular plant diversity.</p>
Data from: Nitrogen fertilization, not water addition, alters plant phylogenetic community structure in a semi-arid steppe
Open the record for dataset details and reuse information.
Intra-specific variation in plant associated herbivore communities is phylogenetically structured in Brassicaceae
Open the record for dataset details and reuse information.
Large invasive herbaceous plants decrease the taxonomic, functional and phylogenetic diversity of birds via their reproductive traits
Open the record for dataset details and reuse information.
Data and code from: Loss of resource-conservative species affects plant phylogenetic and functional structure under long-term snow addition
Open the record for dataset details and reuse information.
The interplay between defaunation and phylogenetic diversity affect leaf damage by natural enemies in tropical plants
Open the record for dataset details and reuse information.
Phylogenetic conflicts, combinability, and deep phylogenomics in plants
Open the record for dataset details and reuse information.
Phylogenetic restriction of plant invasion in drought-stressed environments: implications for insect-pollinated plant communities in water-limited ecosystems
Open the record for dataset details and reuse information.
Capturing single-copy nuclear genes, organellar genomes, and nuclear ribosomal DNA from deep genome skimming data for plant phylogenetics: A case study in Vitaceae
Open the record for dataset details and reuse information.
Data from: Grassland restoration characteristics influence phylogenetic and taxonomic structure of plant communities and suggest assembly mechanisms
Open the record for dataset details and reuse information.
Environment differentially affects the functional and phylogenetic structures of plant communities in a dry evergreen Afromontane tropical forest
Open the record for dataset details and reuse information.
Data from: Introduced bees (Osmia cornifrons) collect pollen from both coevolved and novel host-plant species within their family-level phylogenetic preferences
Open the record for dataset details and reuse information.
Determinants of global variation in taxonomic and phylogenetic diversity of invasive plants
Open the record for dataset details and reuse information.
Data from: Soil fungi underlie a phylogenetic pattern in plant growth responses to nitrogen enrichment
Open the record for dataset details and reuse information.
Data from: Riders in the sky (islands): using a mega-phylogenetic approach to understand plant species distribution and coexistence at the altitudinal limits of angiosperm plant life
Open the record for dataset details and reuse information.
Data from: Temperature shapes opposing latitudinal gradients of plant taxonomic and phylogenetic β diversity
Open the record for dataset details and reuse information.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.