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174
datasets available to search
ShareScore release 0.9.0
Dataset results
174 results for “Single-cell omics”
Single-cell multi-omics analysis identifies metabolism-linked epigenetic reprogramming as a driver of therapy-resistant medulloblastoma [CUT&RUN]
GEO Series GSE283603. Homo sapiens. 29 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cellular states, clonal dynamics, and evolution in Pearson syndrome revealed via single-cell multi-omics [Invitro_scRNA]
GEO Series GSE173935. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Characterization of human pluripotent stem cell differentiation by single-cell dual-omics analyses (scRNA-seq)
GEO Series GSE216324. Homo sapiens; Mus musculus. 23 samples. Type: Expression profiling by high throughput sequencing.
Single-cell multi-omic analysis of the vestibular schwannoma ecosystem uncovers a nerve injury-like state
GEO Series GSE216784. Homo sapiens. 47 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
BABEL enables cross-modality translation between multi-omic profiles at single-cell resolution
GEO Series GSE166797. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Decoding dynamic epigenetic landscapes in human oocytes using single-cell multi-omics sequencing
GEO Series GSE154762. Homo sapiens. 941 samples. Type: Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Single-cell multi-omics profiling links dynamic DNA methylation to cell fate decisions during early mammalian organogenesis [scNMT_RNA-seq]
GEO Series GSE204902. Mus musculus. 1824 samples. Type: Expression profiling by high throughput sequencing.
Single-cell multi-omics analysis identifies metabolism-linked epigenetic reprogramming as a driver of therapy-resistant medulloblastoma [PDX Multiome]
GEO Series GSE283606. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics [Young 1]
GEO Series GSE219106. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Cellular states, clonal dynamics, and evolution in Pearson syndrome revealed via single-cell multi-omics [NAMDC_scATAC]
GEO Series GSE217448. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell omics reveal human mononuclear phagocyte heterogeneity and inflammatory DC in health and disease
GEO Series GSE132566. Homo sapiens. 221 samples. Type: Expression profiling by high throughput sequencing.
Single-cell multi-omic and multi-region atlas of the Human Alzheimer's Disease Brain
GEO Series GSE308132. Homo sapiens. 0 samples. Type: Methylation profiling by high throughput sequencing; Other.
Single-Cell and Spatial Multi-Omics Reveal Mechanical Stress Driving Heterogeneous Xylem Development in Populus [Single-cell RNA-seq]
GEO Series GSE267159. Populus trichocarpa. 12 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Omics Reveals Dyssynchrony of the Innate and Adaptive Immune System in Progressive COVID-19 [CITE-seq]
GEO Series GSE155222. Homo sapiens. 6 samples. Type: Other.
Single-cell multi-omics in human clonal hematopoiesis reveals that DNMT3A R882 mutations perturb early progenitor states through selective hypomethylation.
GEO Series GSE158067. Homo sapiens; Mus musculus. 26 samples. Type: Methylation profiling by high throughput sequencing.
Single-Cell multi-omics reveals disrupted gene regulatory landscape and cell differentiation by Wilms tumor-associated ENL mutation in the developing kidney
GEO Series GSE243871. Homo sapiens; Mus musculus. 28 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Cellular states, clonal dynamics, and evolution in Pearson syndrome revealed via single-cell multi-omics [Tcell_scATAC_ASAP]
GEO Series GSE217449. Homo sapiens. 7 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell multi-omics sequencing reveals the functional regulatory landscape of STAT3-V637M Hyper-IgE syndrome
GEO Series GSE212479. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Single-cell omics reveal human GM-CSF-dependent mononuclear phagocyte subsets in humanized mice
GEO Series GSE151089. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-cell multi-omics sequencing of human spermatogenesis reveals a DNA demethylation event associated with male meiotic recombination
GEO Series GSE235324. Homo sapiens; Mus musculus. 1454 samples. Type: Methylation profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.