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98
datasets available to search
ShareScore release 0.9.0
Dataset results
98 results for “Targeted capture”
IDLV capture for gRNA off-target analysis
GEO Series GSE133861. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Sensitive and unbiased genome-wide profiling of base-editor-induced off-target activity with CHANGE-seq-BE [Hybrid Capture Sequencing for Cas9]
GEO Series GSE307892. Homo sapiens. 18 samples. Type: Other.
Dynamic patterns of DNA methylation in the normal prostate epithelial differentiation program are targets of aberrant methylation in prostate cancer [Methyl Capture]
GEO Series GSE174662. Homo sapiens. 4 samples. Type: Methylation profiling by high throughput sequencing.
A 3’-end capture sequencing method for high-throughput targeted gene expression profiling
GEO Series GSE190096. Homo sapiens. 720 samples. Type: Expression profiling by high throughput sequencing.
Targeted high-resolution chromosome conformation capture at genome-wide scale in mouse erythroid cells
GEO Series GSE160229. Mus musculus. 3 samples. Type: Other.
Targeted capture of hundreds of nuclear genes unravels phylogenetic relationships of the diverse Neotropical palm tribe Geonomateae.
<p>The tribe Geonomateae is a widely distributed group of 103 species of Neotropical palms which contains six ecologically important understory or subcanopy genera. Although it has been the focus of many studies, our understanding of the evolutionary history of this group, and in particular of the taxonomically complex genus <em>Geonoma</em>, is far from complete due to a lack of molecular data. Specifically, the previous Sanger sequencing-based studies used a few informative characters and partial sampling. To overcome these limitations, we used a recently developed Arecaceae-specific target capture bait set to undertake a phylogenomic analysis of the tribe Geonomateae. We sequenced 3,988 genes for 85% of the species of the tribe, including 84% of the species of the largest genus, <em>Geonoma</em>.<em> </em>Phylogenetic relationships were inferred using both concatenation and coalescent methods. Overall, our phylogenetic tree is highly supported and congruent with taxonomic delimitations although several morphological taxa were revealed to be non-monophyletic. It is the first time that such a large genomic dataset is provided for an entire tribe within the Arecaceae. Our study lays the groundwork not only for detailed macro- and micro-evolutionary studies within the group, but also sets a workflow for understanding other species complexes across the tree of life.</p>
Canadian Profiling and Targeted Agent Utilization Trial (CAPTUR)
ClinicalTrials.gov study NCT03297606. IPD Sharing: YES. Countries: 1. Publications: 0.
An unbiased survey of distal element-gene regulatory interactions with direct-capture targeted Perturb-seq
GEO Series GSE303901. Homo sapiens. 29 samples. Type: Expression profiling by high throughput sequencing.
Target capture bisulfite sequencing (tcBS-seq) to evaluate clonal methylation inheritance [BiSulfite-seq]
GEO Series GSE234028. Mus musculus. 8 samples. Type: Methylation profiling by high throughput sequencing.
Target capture bisulfite sequencing (tcBS-seq) to evaluate clonal methylation inheritance [RNA-seq]
GEO Series GSE234024. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
Igk locus capture-based target enrichment sequencing
GEO Series GSE138135. Mus musculus. 3 samples. Type: Other.
Capture of Associated Targets on Chromatin (CATCH) Links Long-Distance Chromatin Looping to Transcriptional Coordination
GEO Series GSE85762. Homo sapiens. 13 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Development of a potent epigenetic editor targeting human PCSK9 with durable reduction of cholesterol in mice and non-human primates [hybrid capture methylseq]
GEO Series GSE282436. Homo sapiens; Mus musculus. 66 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The Value of Full-targeted Pathogen Capture Metagenomics Next Generation Sequencing in Etiological Diagnosis of Sepsis
ClinicalTrials.gov study NCT05540808. IPD Sharing: NO. Countries: 0. Publications: 0.
Systematic characterization of the HOXA9 downstream targets in MLL-r leukemia by non-coding CRISPR screens [Capture-C]
GEO Series GSE215927. Homo sapiens. 2 samples. Type: Other.
Structural basis for RNA capture and surveillance by the human Nuclear Exosome Targeting (NEXT) complex
GEO Series GSE185374. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Functional maps of a genomic locus reveal confinement of an enhancer by its target gene [Region-capture Micro-C (RCMC)]
GEO Series GSE297277. Mus musculus. 12 samples. Type: Other.
B cells targeting parasites capture spatially linked antigens to secure T cell help
GEO Series GSE274341. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing; Other.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.