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219
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ShareScore release 0.9.0
Dataset results
219 results for “Timecourse”
Timecourse of SARS-CoV-2 Infection with New York & Washington Isolates
GEO Series GSE207923. Homo sapiens. 27 samples. Type: Expression profiling by high throughput sequencing.
Allele-specific ATAC-seq over a timecourse of inducible XCI in mESCs
GEO Series GSE240677. Mus musculus. 20 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
van Kessel BB120 v STR417 timecourse
GEO Series GSE44195. Vibrio harveyi. 8 samples. Type: Expression profiling by array.
A serum-free media formulation for cultured meat production supports bovine satellite cell differentiation in the absence of serum starvation [Timecourse]
GEO Series GSE173198. Bos taurus. 20 samples. Type: Expression profiling by high throughput sequencing.
Timecourse RNA-seq analysis of Madurella mycetomatis grain development in Galleria mellonella
GEO Series GSE213329. Galleria mellonella. 15 samples. Type: Expression profiling by high throughput sequencing.
Mouse Prostate Developmental Timecourse
GEO Series GSE19225. Mus musculus. 42 samples. Type: Expression profiling by array.
Ips pini JHIII male & female timecourse
GEO Series GSE1483. Ips pini. 32 samples. Type: Expression profiling by array.
Molecular profiling of osteoprogenitor cells reveals FOS as a master regulator of bone non-union [timecourse]
GEO Series GSE226565. Homo sapiens. 47 samples. Type: Expression profiling by high throughput sequencing.
Ribo-Seq timecourse in RAW264.7 cells upon LPS treatment
GEO Series GSE155233. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
Identifying novel surface markers for megakaryocyte progenitor cells [10x timecourse]
GEO Series GSE160604. Homo sapiens. 34 samples. Type: Expression profiling by high throughput sequencing.
Differential expression of Dictyostelium discoideum AX2 upon infection with wt L. pneumophila JR32 vs. uninfected 6h p.i. (timecourse experiment)
GEO Series GSE50961. Dictyostelium discoideum. 6 samples. Type: Expression profiling by array.
U2OS_p53KO_Metabolomics_Timecourse
<p>We used mass spectrometry-based metabolite profiling to identify targetable differences in the metabolic states of U2OS and U2OS<em><sup>p53KO </sup></em>cells, both at steady-state and following etoposide exposure. Overall, we quantified the abundance of 463 metabolites.</p> <p>For sample collection, cells were seeded on 6-well plates at 200,000 cells per well. After adherence overnight, cells were treated with DMSO, 5 µM etoposide, or 31.6 µM etoposide. At the indicated timepoints, samples were collected in parallel for metabolite extraction or protein quantification. For total protein quantification, cells were trypsinized and pelleted. Pellets were lysed using SDS lysis buffer and quantified using a BCA assay. For extraction of metabolites, growth media was removed, and cells were washed 2 times with ice-cold PBS. With the 6-well plate on dry ice, cells were submerged in 500 µL 80% MeOH. Samples were then incubated at -80°C for 15 minutes. Cell scrapers were used to harvest each sample, and sample wells were washed with an additional 300 µL of 80% MeOH. Samples were vortexed at 4°C for 10 minutes and then centrifuged at top speed for 10 minutes at 4°C. Supernatant was transferred to a new tube and samples were dried using a speed vac. Dried pellets were resuspended in 100 µL of water and vortexed for 10 minutes at 4°C. Samples were then spun for 10 minutes at top speed at 4°C, andsupernatant from each sample was transferred to an LC-MS vial. A QExactive Plus Quadrupole Orbitrap Mass Spectrometer equipped with a HESI II probe (Thermo Fisher Scientific) was then used to perform Mass Spectrometry. Metabolites were quantified by integrating peaks in TraceFinder 5.1 (Thermo Fisher Scientific). Mass tolerance was set to 5 ppm and expected retention times were benchmarked using an in-house library of chemical standards. Raw ion counts were normalized to the total protein amount, as quantified using BCA. Fold-change and significance was determined using a custom MATLAB script. </p>
Timecourse of Immobilization Experiment
ClinicalTrials.gov study NCT02984332. IPD Sharing: NO. Countries: 1. Publications: 0.
Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
GEO Series GSE117296. Arabidopsis thaliana. 48 samples. Type: Expression profiling by high throughput sequencing.
UV timecourse
GEO Series GSE4509. Zea mays. 38 samples. Type: Expression profiling by array.
RNA-seq 6 day timecourse for K562 cells grown in hypoxia/normoxia (21%, 5%, 1% oxygen)
GEO Series GSE144527. Homo sapiens. 36 samples. Type: Expression profiling by high throughput sequencing.
Heterochronic Evolution Reveals Modular Timing Changes in Budding Yeast Transcriptomes (Natural Strain Timecourse)
GEO Series GSE24771. Saccharomyces cerevisiae; Saccharomyces paradoxus. 173 samples. Type: Expression profiling by array.
Plasmodium falciparum PfAP2-G2 KO asexual microarray timecourse
GEO Series GSE160923. Plasmodium falciparum. 16 samples. Type: Expression profiling by array.
Timecourse of Interferon-Gamma Treatment of Bone Marrow-Derived Macrophages (BMDMs)
GEO Series GSE42504. Mus musculus. 25 samples. Type: Expression profiling by array.
Activin A-driven differentiation timecourse with human embryonic stem cells
GEO Series GSE9063. Homo sapiens. 7 samples. Type: Expression profiling by array.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.