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Dataset results
606 results for “association genetics”
Data from: Revealing biogeographic patterns in genetic diversity of native and invasive plants and their association with soil community diversity in the Chinese coast
<p><span>Within-species genetic diversity is shaped by multiple evolutionary forces within the confines of geography, and has cascading effects on the biodiversity of other taxa and levels. Invasive species are often initially limited in genetic diversity but still respond rapidly to their new range, possibly through 'pre-adapted' genotypes or multiple sources of genetic diversity, but little is known about how their genetic structure differs from that of native species and how it alters the genetic-species diversity relationship.</span><span> Here, we selected a widespread native species (<em>Phragmites australis</em>) and its co-occurring invasive competitor (<em>Spartina alterniflora</em>) as our model plant species. We investigated the genetic structure of <em>P. australis</em> using two chloroplast fragments and ten nuclear microsatellites in 13 populations along the Chinese coastal wetlands. We discovered a distinct geographical differentiation, showing that the northern and southern populations harbored unique genotypes.</span><span> We also found a significant increase in genetic diversity (allelic richness and expected heterozygosity) from south to north. Combined with previous studies of <em>S. alterniflora</em>, </span><span>the Mantel tests revealed</span><span> a significant correlation of genetic distances between <em>P. australis </em>and<em> S. alterniflora</em> even when controlling for geographic distance,</span><span> suggesting that the invasive species <em>S. alterniflora</em> might exhibit a phylogeographic pattern similar to that of the native species to some extent. Furthermore, our results suggest that the <em>S. alterniflora </em>invasion has altered the relationship between the genetic diversity of the dominant native plant and the associated species richness of soil nematodes. The reason for the alteration of genetic-species diversity relationship might be that the biological invasion weakens the environmental impact on both levels of biodiversity. Our findings contribute to understanding the latitudinal patterns of intraspecific genetic diversity in widespread species. This work on the genetic diversity analysis of native species also provides significant implications for the invasion stage and ecological consequences of biological invasions.</span></p>
Association of Host Genetics With Vaccine Efficacy and Study of Immune Correlates of Risk From a Tetravalent Dengue Vaccine
ClinicalTrials.gov study NCT02827162. IPD Sharing: YES. Countries: 1. Publications: 2.
Data set for: Genetic dissection of marker trait associations for grain micro-nutrients and thousand grain weight under heat and moisture deficit stress conditions in wheat
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Data from: A shift in the host web occupancy of dew‐drop spiders associated with genetic divergence in the Southwest Pacific
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Data from: In situ genetic association for serotiny, a fire-related trait, in Mediterranean maritime pine (Pinus pinaster Aiton)
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Data from: Genetic differentiation associated with host plants and geography among six widespread species of South American Blepharoneura fruit flies (Tephritidae)
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Genomic evidence for contrasting patterns of host‐associated genetic differentiation across shared host‐plant species in leaf‐ and bud‐galling sawflies
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Reduced genetic diversity associated with the northern expansion of an amphibian species with high habitat-specialization, Ascaphus truei, resolved using two types of genetic markers
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Data from: Population genetics and independently replicated evolution of predator-associated burst speed ecophenotypy in mosquitofish
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Data from: Genome-wide association studies across environmental and genetic contexts reveal complex genetic architecture of symbiotic extended phenotypes
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Data from: Genetic variation in growth and leaf traits associated with local adaptation to climate in yellow birch (Betula alleghaniensis Britton)
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Modelling the genetic aetiology of complex disease: human-mouse conservation of noncoding features and disease-associated loci
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Genetic variants beyond amyloid and tau associated cognitive decline: a cohort study
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Data from: Revealing biogeographic patterns in genetic diversity of native and invasive plants and their association with soil community diversity in the Chinese coast
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Identification of genetic variants associated with anterior cruciate ligament rupture and AKC standard coat color in the Labrador Retriever
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Raw data: Association and functional analysis of angiotensin-converting enzyme 2 gene genetic variants with the pathogenesis of pre-eclampsia
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Data from: Fine-scale genetic structure in the orchid Gymnadenia conopsea is not associated with local density of flowering plants
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Leaf beetle community data for 20 Iberian localities and associated genetic barcodes (cox1)
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Genetic insight into a polygenic trait using a novel Genome Wide Association approach in a wild amphibian population
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Data from: Genetic-environment associations explain genetic differentiation and variation between western and eastern North Pacific Rhinoceros Auklet (Cerorhinca monocerata) breeding colonies
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.