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Text-fig. 8. Carpolithes (a–t). a–e: Carpolithes sp. 1. USNM PAL 772366. Scale bar = 1 cm. a: Lateral view of endocarp, note two longitudinal ridges. b: Lateral view of endocarp rotated 90° from (a), note single lateral ridge in center, a, b reflected light, palladium coated. c: Lateral view, Micro-CT scan surface rendering. d: View of rounded end of the endocarp, reflected light, palladium coated. e: View of the opposite (pointed) end of the endocarp, note split; reflected light, palladium coated. f–j: Carpolithes sp. 2. USNM PAL 772367. Scale bar = 5 mm. f: Lateral view, base down; note raphe-like structure (arrow), reflected light, palladium coated. g: Lateral view, the raphe-like structure extending vertically from the base. h: Lateral view, rotated 90° from (g). i: Lateral view, the opposite face to that in (h). j: Basal view, raphe-like structure running from the center to the right of the image. g–j: CT scan surface renderings. k–o: Carpolithes sp. 3 USNM PAL 772368. Scale bar = 5 mm. k: Ventral view of the specimen, note flared apical extension, reflected light, uncoated. l: Dorsal view illustrating the flared apical extension, rotated 180o from (k). m: Lateral view rotated 90° from that in (l). n: Apical view, the apical extension with central pore (arrow) and a clear lineation running down the side to the top of the image. o: Basal view. l–o: Micro-CT scan surface renderings. p–t: Carpolithes sp. 4. USNM PAL 772369. Scale bar = 3 mm. p: Basal view illustrating the concentric rings of radiating possible cells surrounding a central depression. q: Lateral view, base down, note possible cellular pattern. r: Lateral view, rotated 180° from (q), base down; p–r: reflected light, palladium coated. s, t: Basal and lateral views, micro-CT scan surface renderings. in The Early Middle Eocene Wagon Bed Carpoflora Of Central Wyoming, U.S.A.
Text-fig. 8. Carpolithes (a–t). a–e: Carpolithes sp. 1. USNM PAL 772366. Scale bar = 1 cm. a: Lateral view of endocarp, note two longitudinal ridges. b: Lateral view of endocarp rotated 90° from (a), note single lateral ridge in center, a, b reflected light, palladium coated. c: Lateral view, Micro-CT scan surface rendering. d: View of rounded end of the endocarp, reflected light, palladium coated. e: View of the opposite (pointed) end of the endocarp, note split; reflected light, palladium coated. f–j: Carpolithes sp. 2. USNM PAL 772367. Scale bar = 5 mm. f: Lateral view, base down; note raphe-like structure (arrow), reflected light, palladium coated. g: Lateral view, the raphe-like structure extending vertically from the base. h: Lateral view, rotated 90° from (g). i: Lateral view, the opposite face to that in (h). j: Basal view, raphe-like structure running from the center to the right of the image. g–j: CT scan surface renderings. k–o: Carpolithes sp. 3 USNM PAL 772368. Scale bar = 5 mm. k: Ventral view of the specimen, note flared apical extension, reflected light, uncoated. l: Dorsal view illustrating the flared apical extension, rotated 180o from (k). m: Lateral view rotated 90° from that in (l). n: Apical view, the apical extension with central pore (arrow) and a clear lineation running down the side to the top of the image. o: Basal view. l–o: Micro-CT scan surface renderings. p–t: Carpolithes sp. 4. USNM PAL 772369. Scale bar = 3 mm. p: Basal view illustrating the concentric rings of radiating possible cells surrounding a central depression. q: Lateral view, base down, note possible cellular pattern. r: Lateral view, rotated 180° from (q), base down; p–r: reflected light, palladium coated. s, t: Basal and lateral views, micro-CT scan surface renderings.
Text-fig. 9. Carpolithes (a–r). a–d: Carpolithes sp. 5. USNM PAL 772370. Scale bar = 5 mm, reflected light, palladium coated. a: Lateral view of seed, apex up, possible raphe descending from apex toward viewer. b: Lateral view of seed, apex up, possible raphe on right. c: Lateral view, opposite side, apex up, possible raphe on left. d: Apical view, note central pit with raphe descending towards bottom margin. e–h: Carpolithes sp. 6. USNM PAL 772371. Scale bar = 5 mm. e: Basal view illustrating depression and keel in plane of bisymmetry, reflected light, palladium coated. f–h: Micro-CT scan surface rendering. f: Lateral view showing relatively smooth rounded surface. g: Specimen rotated 180° from (f), surface partially eroded. h: Longitudinal view, showing median keel. i–m: Carpolithes sp. 7 USNM PAL 772372. Scale bar = 5 mm. i: View of intact face of globose fruit, possible apical constriction at top. j: Lateral view, intact surface to right, possible apical constriction at top, both micro-CT scan surface renderings. k: Apical view. l: Face view illustrating the mineral filling and the fine, radiating structure of the fruit wall on the left and right margins, both reflected light, palladium coated. m: Closeup of the cellular layer on the left of (l), micro-CT scan surface rendering. n–p: Carpolithes sp. 8. USNM PAL 772373. Scale bar = 3 mm, reflected light, palladium coated. n: Lateral view of pyrene-like structure, one ridge running vertically in the center of view, the other two forming the left and right margins. o: Lateral view of pyrene-like structure, ridge in (n) on the left. p: End-on view illustrating one convex, one concave, and one relatively flat to very slightly concave face. q, r: Carpolithes sp. 9 USNM PAL 772374. Scale bar = 5 mm, reflected light, palladium coated. q: Exterior of the smooth broken half-sphere. r: Interior of the broken half-sphere. in The Early Middle Eocene Wagon Bed Carpoflora Of Central Wyoming, U.S.A.
Text-fig. 9. Carpolithes (a–r). a–d: Carpolithes sp. 5. USNM PAL 772370. Scale bar = 5 mm, reflected light, palladium coated. a: Lateral view of seed, apex up, possible raphe descending from apex toward viewer. b: Lateral view of seed, apex up, possible raphe on right. c: Lateral view, opposite side, apex up, possible raphe on left. d: Apical view, note central pit with raphe descending towards bottom margin. e–h: Carpolithes sp. 6. USNM PAL 772371. Scale bar = 5 mm. e: Basal view illustrating depression and keel in plane of bisymmetry, reflected light, palladium coated. f–h: Micro-CT scan surface rendering. f: Lateral view showing relatively smooth rounded surface. g: Specimen rotated 180° from (f), surface partially eroded. h: Longitudinal view, showing median keel. i–m: Carpolithes sp. 7 USNM PAL 772372. Scale bar = 5 mm. i: View of intact face of globose fruit, possible apical constriction at top. j: Lateral view, intact surface to right, possible apical constriction at top, both micro-CT scan surface renderings. k: Apical view. l: Face view illustrating the mineral filling and the fine, radiating structure of the fruit wall on the left and right margins, both reflected light, palladium coated. m: Closeup of the cellular layer on the left of (l), micro-CT scan surface rendering. n–p: Carpolithes sp. 8. USNM PAL 772373. Scale bar = 3 mm, reflected light, palladium coated. n: Lateral view of pyrene-like structure, one ridge running vertically in the center of view, the other two forming the left and right margins. o: Lateral view of pyrene-like structure, ridge in (n) on the left. p: End-on view illustrating one convex, one concave, and one relatively flat to very slightly concave face. q, r: Carpolithes sp. 9 USNM PAL 772374. Scale bar = 5 mm, reflected light, palladium coated. q: Exterior of the smooth broken half-sphere. r: Interior of the broken half-sphere.
Text-fig. 4. Juglandaceae Carya (a–w). Scale bars = 1 cm. a–d: USNM PAL 772352, reflected light, palladium coated. a: Obliquelateral view of nut, apex up. b: Basal view with damage to left and clear depiction of meridional grooves. c, d: Two lateral views oriented about 130° from each other and avoiding the area of damage; the meridional grooves clear in (c). e–l: USNM PAL 772350. e: Intact nut, lateral view, apex up, reflected light. f: One half of split nut revealing in situ chalcedony locule cast, reflected light. g–k: Virtual sections from micro-CT data. g: Longitudinal section parallel to the exposed face in (f). h: Longitudinal section at 90° from (g). i: Transverse section in apical 1/3 showing locule bracketed by C-shaped lacunae (arrows). j: Equatorial transverse section showing two lobes of the locule separated by primary septum, lacuna evident below as white line. k: Transverse section near base in The Early Middle Eocene Wagon Bed Carpoflora Of Central Wyoming, U.S.A.
Text-fig. 4. Juglandaceae Carya (a–w). Scale bars = 1 cm. a–d: USNM PAL 772352, reflected light, palladium coated. a: Obliquelateral view of nut, apex up. b: Basal view with damage to left and clear depiction of meridional grooves. c, d: Two lateral views oriented about 130° from each other and avoiding the area of damage; the meridional grooves clear in (c). e–l: USNM PAL 772350. e: Intact nut, lateral view, apex up, reflected light. f: One half of split nut revealing in situ chalcedony locule cast, reflected light. g–k: Virtual sections from micro-CT data. g: Longitudinal section parallel to the exposed face in (f). h: Longitudinal section at 90° from (g). i: Transverse section in apical 1/3 showing locule bracketed by C-shaped lacunae (arrows). j: Equatorial transverse section showing two lobes of the locule separated by primary septum, lacuna evident below as white line. k: Transverse section near base
Data from: Sedimentary organic carbon and nitrogen sequestration across a vertical gradient on a temperate wetland seascape including salt marshes, seagrass meadows and rhizophytic macroalgae beds
<p>Dataset </p> <p> </p> <p>Coastal wetlands are key in regulating coastal carbon and nitrogen dynamics and contribute significantly to climate change mitigation and anthropogenic nutrient reduction. We investigated organic carbon (OC) and total nitrogen (TN) stocks and burial rates at four adjacent vegetated coastal habitats across the seascape elevation gradient of Cádiz Bay (South Spain), including one species of salt marsh, two of seagrasses, and a macroalgae. OC and TN stocks in the upper 1 m sediment layer were higher at the subtidal seagrass <em>Cymodocea nodosa</em> (72.3 Mg OC ha<sup>-1</sup>, 8.6 Mg TN ha<sup>-1</sup>) followed by the upper intertidal salt marsh <em>Sporobolus maritimus</em> (66.5 Mg OC ha<sup>-1</sup>, 5.9 Mg TN ha<sup>-1</sup>), the subtidal rhizophytic macroalgae <em>Caulerpa prolifera</em> (62.2 Mg OC ha<sup>-1</sup>, 7.2 Mg TN ha<sup>-1</sup>), and the lower intertidal seagrass <em>Zostera noltei</em> (52.8 Mg OC ha<sup>-1</sup>, 5.2 Mg TN ha<sup>-1</sup>). The sedimentation rates increased from lower to higher elevation, from the intertidal salt marsh (0.24 g cm<sup>-2</sup> yr<sup>-1</sup>) to the subtidal macroalgae (0.12 g cm<sup>-2</sup> yr<sup>-1</sup>). The organic carbon burial rate was highest at the intertidal salt marsh<em> </em>(91 ± 31 g OC m<sup>-2</sup> yr<sup>-1</sup>), followed by the intertidal seagrass, (44 ± 15 g OC m<sup>-2</sup> yr<sup>-1</sup>), the subtidal seagrass (39 ± 6 g OC m<sup>-2</sup> yr<sup>-1</sup>), and the subtidal macroalgae (28 ± 4 g OC m<sup>-2</sup> yr<sup>-1</sup>). Total nitrogen burial rates were similar among the three lower vegetation types, ranging from 5 ± 2 to 3 ± 1 g TN m<sup>-2</sup> yr<sup>-1</sup>, and peaked at <em>S. maritimus </em>salt marsh with 7 ± 1 g TN m<sup>-2</sup> yr<sup>-1</sup>. The contribution of allochthonous sources to the sedimentary organic matter also decreased with elevation, from 72% in <em>C. prolifera</em> to 33% at <em>S. maritimus</em>. Our results highlight the need of using habitat-specific OC and TN stocks and burial rates to improve our ability to predict OC and TN sequestration capacity of vegetated coastal habitats at the seascape level. We also demonstrated that the stocks and burial rates in <em>C. prolifera </em>habitats were within the range of well-accepted blue carbon ecosystems such as seagrass meadows and salt marshes.</p>
The Response of Bed Elevation to Small-Scale Hydrodynamics within Coastal Mangroves
<p>Dataset for the paper titled "The Response of Bed Elevation to Small-Scale Hydrodynamics within Coastal Mangroves", including raw and processed data.</p>
Laboratory data - physical modelling of gravel bed rivers under unsteady flow conditions
<p>Sediment transport and topography data from laboratory experiments under unsteady flow conditions.</p> <p>Data supporting the manuscript:<br> Redolfi, M., Bertoldi, W., Tubino, M., & Welber, M. (2018). Bed load variability and morphology of gravel bed rivers<br> subject to unsteady flow: A laboratory investigation. Water Resources Research, 54, 842–862. https://doi.org/<br> 10.1002/2017WR021143<br> Details about the physical model and the experimental procedure can be found in the paper.</p>
Supplementary material from the study on survival of African swine fever virus in feed, bedding materials and mechanical vectors, and their potential role in virus transmission
<p><span>Supplementary material from the experimental studies developed to analyse the survival of African swine fever virus in feed, bedding materials and mechanical vectors, and their potential role in virus transmission. </span></p> <p> </p>
Figure 9. Goniatites multiliratus Gordon, 1962 from the Figure 2 Ranch section, Sierra Diablo. Specimen NPL 68494 from bed 17 in Late Viséan (late Mississippian) ammonoids from the Barnett Shale, Sierra Diablo Escarpment, Culberson County, Texas, USA
Figure 9. Goniatites multiliratus Gordon, 1962 from the Figure 2 Ranch section, Sierra Diablo. Specimen NPL 68494 from bed 17 (sample OOTXCU-25); × 2.0.
SVAFotate core GRCh38 input BED including gnomADv4.1
<p>An updated input BED file for use with SVAFotate including the SV data from gnomAD v4.1. This core file is for use with GRCh38 as all included data was derived from GRCh38 alignments (no liftovers included).</p>
Figure 5 in Organic geochemistry of a high-latitude Lower Cretaceous lacustrine sediment sample from the Koonwarra Fossil Beds, South Gippsland, Victoria, Australia
Figure 5: Partial m/z 178, 202 and 228 mass chromatograms showing the distribution of common polycyclic aromatic hydrocarbons (PAH) in the aromatic fraction.
Figure 4 in Organic geochemistry of a high-latitude Lower Cretaceous lacustrine sediment sample from the Koonwarra Fossil Beds, South Gippsland, Victoria, Australia
Figure 4: Partial m/z 191 and 217 mass chromatograms used in calculation of sterane/hopane ratio. A ratio of 0.03 indicates that a very significant proportion of overall biomass in the lake was derived from bacteria.
Figure 2 in Organic geochemistry of a high-latitude Lower Cretaceous lacustrine sediment sample from the Koonwarra Fossil Beds, South Gippsland, Victoria, Australia
Figure 2: An uncommon example of disarticulation of a fish carcass, collected during an excavation of the Koonwarra Fossil Beds led by Tom Rich in 2013. This specimen was collected approximately 5 m from the bottom of the unit (defined here as the first> 20 cm thick unit of green siltstone/mudstone; the underlying rocks are predominantly cross-bedded, fluviatile arkosic sandstone).
Figure 3 in Organic geochemistry of a high-latitude Lower Cretaceous lacustrine sediment sample from the Koonwarra Fossil Beds, South Gippsland, Victoria, Australia
Figure 3: Saturate fraction total ion chromatogram and m/z 85 mass chromatogram showing distribution and relative abundances of n-alkanes and isoprenoids pristane and phytane.
Figure 1 in Organic geochemistry of a high-latitude Lower Cretaceous lacustrine sediment sample from the Koonwarra Fossil Beds, South Gippsland, Victoria, Australia
Figure 1: Location of the Lower Cretaceous Koonwarra Fossil Beds in South Gippsland, Victoria, Australia
Figure 16 in Description of new cranial material of Propalorchestes (Marsupialia: Palorchestidae) from the Middle Miocene Camfield Beds, Northern Territory, Australia
Figure 16. Graphic comparison of QMV2000GFV459 upper molars with previously published Propalorchetes material Murray (1990), Black (2006) and Palorchestes annulus Black (1997a): specimen outlines scaled so that all M1 lengths equal that of Propalorchestes novaculacephalus NTMP862-27; series depicted from top to bottom in order of increasing M1 length; left specimens have been reflected for ease of comparison so that the series represents right molars in occlusal view.
Figure 17 in Description of new cranial material of Propalorchestes (Marsupialia: Palorchestidae) from the Middle Miocene Camfield Beds, Northern Territory, Australia
Figure 17. Graphic comparison of QMV2000GFV406 lower right molars in occlusal view with previously published Propalorchetes material Murray (1990): M length of QVM2000GFV406 and Propalorchestes ponticulus AR1802 Murray (1990) scaled to M of NMVP187282; 1 1 AR11302 scaled to M 4 of NMVP187282: SGM1008 size approximated to other M 1 material; series depicted top to bottom in order of increasing M length; left specimens have been reflected to become right specimens for ease of comparison.
Figure 15 in Description of new cranial material of Propalorchestes (Marsupialia: Palorchestidae) from the Middle Miocene Camfield Beds, Northern Territory, Australia
Figure 15. Bivariate plots of dental measures for Propalorchestes, small Palorchestes and other comparative taxa: a. width against length for M1; b, width against length for M; c, width against length 1 for M2, to provide comparison with QMV2000GFV406; black symbols represent the anterior loph width and grey symbols represent the posterior loph width; lines connecting black to grey symbols represent the disparity between anterior and posterior measures of the same molar; data and sources provided in Table 1.
Figure 14 in Description of new cranial material of Propalorchestes (Marsupialia: Palorchestidae) from the Middle Miocene Camfield Beds, Northern Territory, Australia
Figure 14. Dental measurements for Propalorchestes check teeth plotted with those of smaller Palorchestes: a, length upper cheek teeth; b, anteriorloph width upper cheek teeth; c. lower cheek teeth; d, anteriorloph width lower cheek teeth; data points that represent measures for successive teeth of the same tooth row are connected by a line; data points that represent measures for non-successive teeth of the same tooth row are connected by a dashed line; Data and sources provided in Table 2.
Figure 13 in Description of new cranial material of Propalorchestes (Marsupialia: Palorchestidae) from the Middle Miocene Camfield Beds, Northern Territory, Australia
Figure 13. Digitally restored illustrations of the new Bullock Creek dental material with morphological features annotated: a, QMV2000GFV459 P3; b, QMV2000GFV459 M1; scale bar represents 10 mm.
Figure 12 in Description of new cranial material of Propalorchestes (Marsupialia: Palorchestidae) from the Middle Miocene Camfield Beds, Northern Territory, Australia
Figure 12. Propalorchetes mandiblular specimen comparison in occlusal view: a, Propalorchetes cf novaculacephalus QVM2000GFV406 right mandiblular fragment; b, Propalorchetes novaculacephalus NMVP187282 paratype right mandiblular fragment (not corrected for parallax); scale bar represents 5 cm.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.