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132
datasets available to search
ShareScore release 0.9.0
Dataset results
132 results for “environmental detection”
Data from: Environmental DNA (eDNA) detects the invasive rusty crayfish (Orconectes rusticus) at low abundances
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Rock pools as a source of environmental DNA for the detection of the threatened Pilbara olive python (Liasis olivaceus barroni)
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Data from: Detection of an endangered aquatic heteropteran using environmental DNA in a wetland ecosystem
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Exploring the use of environmental DNA (eDNA) to detect animal taxa in the mesopelagic zone
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Analytical validation and field testing of a specific qPCR assay for environmental DNA detection of invasive European green crab - Collected and Generated Data
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Data from: Development and validation of rapid environmental DNA (eDNA) detection methods for bog turtle (Glyptemys muhlenbergii)
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Data from: Choice of capture and extraction methods affect detection of freshwater biodiversity from environmental DNA
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Data from: Detection of environmental and morphological adaptation despite high landscape genetic connectivity in a pest grasshopper (Phaulacridium vittatum)
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Data from: Development, validation, and evaluation of an assay for the detection of wood frogs (Rana sylvatica) in environmental DNA
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Data from: Environmental DNA detection of rare and invasive fish species in two Great Lakes tributaries
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Data from: Genome scanning for detecting adaptive genes along environmental gradients in the Japanese conifer, Cryptomeria japonica
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Detection of Khapra Beetle environmental DNA using portable technologies in Australian biosecurity
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Detection of freshwater mussels (Unionidae) using environmental DNA in riverine systems
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Monitoring the birds and the bees: Environmental DNA metabarcoding of flowers detects plant–animal interactions
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Environmental conditions and call-broadcast influence detection of eastern forest owls during standardized surveys
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Supplementary material 4 from: Rusch JC, Mojžišová M, Strand DA, Svobodová J, Vrålstad T, Petrusek A (2020) Simultaneous detection of native and invasive crayfish and Aphanomyces astaci from environmental DNA samples in a wide range of habitats in Central Europe. NeoBiota 58: 1-32. https://doi.org/10.3897/neobiota.58.49358
Table S4
Supplementary material 2 from: Rusch JC, Mojžišová M, Strand DA, Svobodová J, Vrålstad T, Petrusek A (2020) Simultaneous detection of native and invasive crayfish and Aphanomyces astaci from environmental DNA samples in a wide range of habitats in Central Europe. NeoBiota 58: 1-32. https://doi.org/10.3897/neobiota.58.49358
Table S2
Supplementary material 3 from: Rusch JC, Mojžišová M, Strand DA, Svobodová J, Vrålstad T, Petrusek A (2020) Simultaneous detection of native and invasive crayfish and Aphanomyces astaci from environmental DNA samples in a wide range of habitats in Central Europe. NeoBiota 58: 1-32. https://doi.org/10.3897/neobiota.58.49358
Table S3
Supplementary material 1 from: Rusch JC, Mojžišová M, Strand DA, Svobodová J, Vrålstad T, Petrusek A (2020) Simultaneous detection of native and invasive crayfish and Aphanomyces astaci from environmental DNA samples in a wide range of habitats in Central Europe. NeoBiota 58: 1-32. https://doi.org/10.3897/neobiota.58.49358
Table S1
Data from: Optimizing techniques to capture and extract environmental DNA for detection and quantification of fish
Few studies have examined capture and extraction methods for environmental DNA (eDNA) to identify techniques optimal for detection and quantification. In this study, precipitation, centrifugation and filtration eDNA capture methods and six commercially available DNA extraction kits were evaluated for their ability to detect and quantify common carp (Cyprinus carpio) mitochondrial DNA using quantitative PCR in a series of laboratory experiments. Filtration methods yielded the most carp eDNA, and a glass fibre (GF) filter performed better than a similar pore size polycarbonate (PC) filter. Smaller pore sized filters had higher regression slopes of biomass to eDNA, indicating that they were potentially more sensitive to changes in biomass. Comparison of DNA extraction kits showed that the MP Biomedicals FastDNA SPIN Kit yielded the most carp eDNA and was the most sensitive for detection purposes, despite minor inhibition. The MoBio PowerSoil DNA Isolation Kit had the lowest coefficient of variation in extraction efficiency between lake and well water and had no detectable inhibition, making it most suitable for comparisons across aquatic environments. Of the methods tested, we recommend using a 1.5 μm GF filter, followed by extraction with the MP Biomedicals FastDNA SPIN Kit for detection. For quantification of eDNA, filtration through a 0.2–0.6 μm pore size PC filter, followed by extraction with MoBio PowerSoil DNA Isolation Kit was optimal. These results are broadly applicable for laboratory studies on carps and potentially other cyprinids. The recommendations can also be used to inform choice of methodology for field studies.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.