Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

871

datasets available to search

ShareScore release 0.7.1

Reset

Dataset results

871 results for “escherichia coli”

Learn how ShareScore rates datasets ↗
dryad36/100

The presence and abundance of Escherichia coli in beach sediment following a coastal renourishment project

<p>Erosion poses a major threat to oceanic beaches worldwide. To combat this threat, management agencies often utilize renourishment, which supplements eroded beaches with offsite sand. This process alters the physical characteristics of the beach and can subsequently influence the presence and abundance of microbes. In this study, we examined how a renourishment project impacted sand grain size and the presence and abundance of <em>Escherichia</em> <em>coli</em> (<em>E</em>. <em>coli</em>), a common bacteria species. Using an observational field approach, we compared abundances of <em>E. coli</em> and sand grain sizes between non-renourished and renourished sections of Folly Beach, South Carolina, USA in 2014 and 2015. We found that <em>E. coli</em> was prevalent in every zone of the beach in both years of sampling. Additionally, we found that in comparison to non-renourished areas, renourished areas had significantly higher abundances of <em>E. coli</em> and coarser sand grains in the intertidal zone. However, these differences were temporary and only present following the initial renourishment event. Collectively, our findings raise concerns about how physical changes in sand grain size, and the introduction of offsite sand to a beach, could alter bacterial presence and growth. However, more work is needed to fully understand the timescales these effects operate upon.</p>

opencc-zeroSep 2023View details →
dryad36/100

Data from: Clinical antibiotic-resistance plasmids have small effects on biofilm formation and population growth in Escherichia coli in vitro

<div> <div> <div> <p>Antimicrobial resistance (AR) mechanisms encoded on plasmids can affect other phenotypic traits in bacteria, including biofilm formation. These effects may be important contributors to the spread of AR and the evolutionary success of plasmids, but it is not yet clear how common such effects are for clinical plasmids/bacteria, and how they vary among different plasmids and host strains. Here, we used a combinatorial approach to test the effects of clinical AR plasmids on biofilm formation and population growth in clinical and laboratory Escherichia coli strains. In most of the 25 plasmid-bacterium combinations tested, we observed no significant change in biofilm formation upon plasmid introduction, contrary to the notion that plasmids frequently alter biofilm formation. In a few cases we detected altered biofilm formation, and these effects were specific to particular plasmid-bacterium combinations. By contrast, we found a relatively strong effect of a chromosomal streptomycin-resistance mutation (in rpsL) on biofilm formation. Further supporting weak and host-strain- dependent effects of clinical plasmids on bacterial phenotypes in the combinations we tested, we found growth costs associated with plasmid carriage (measured in the absence of antibiotics) were moderate and varied among bacterial strains. These findings suggest some key clinical resistance plasmids cause only mild phenotypic disruption to their host bacteria, which may contribute to the persistence of plasmids in the absence of antibiotics.</p> </div> </div> </div>

opencc-zeroOct 2023View details →
ClinicalTrials.gov36/100

Human Challenge Model Refinement With Enterotoxigenic Escherichia Coli Strain B7A

ClinicalTrials.gov study NCT02773446. IPD Sharing: YES. Countries: 1. Publications: 9.

controlledIPD-YESFeb 2026View details →
ClinicalTrials.gov36/100

Enterotoxigenic Escherichia Coli (ETEC) ETVAX Vaccine Trial in Bangladesh

ClinicalTrials.gov study NCT02531802. IPD Sharing: Not stated. Countries: 1. Publications: 3.

restrictedIPD-UNDECIDEDFeb 2026View details →
dryad36/100

Associations between sensitivity to antibiotics, disinfectants, and heavy metals in natural, clinical and laboratory isolates of Escherichia coli

Open the record for dataset details and reuse information.

publicMar 2020View details →
dryad36/100

Data from: Chicken gut microbiome members limit the spread of an antimicrobial resistance plasmid in Escherichia coli

Open the record for dataset details and reuse information.

publicOct 2021View details →
dryad36/100

Microscopy data from: Identification of genetic interactions with priB links the PriA/PriB DNA replication restart pathway to double-strand DNA break repair in Escherichia coli

Open the record for dataset details and reuse information.

publicJul 2022View details →
dryad36/100

Data from: Spatial and temporal distribution of ribosomes in single cells reveals aging differences between old and new daughters of Escherichia coli

Open the record for dataset details and reuse information.

publicNov 2024View details →
dryad36/100

Data from: Clinical antibiotic-resistance plasmids have small effects on biofilm formation and population growth in Escherichia coli in vitro

Open the record for dataset details and reuse information.

publicOct 2023View details →
dryad36/100

The effect of migration and variation on populations of Escherichia coli adapting to complex fluctuating environments

Open the record for dataset details and reuse information.

publicSep 2022View details →
dryad36/100

Genomic and phenotypic evolution of Escherichia coli in a novel citrate-only resource environment

Open the record for dataset details and reuse information.

publicAug 2020View details →
dryad36/100

A library of reporters of the global regulators of gene expression of Escherichia coli

Open the record for dataset details and reuse information.

publicApr 2024View details →
dryad36/100

A Test of the Repeatability of Measurements of Relative Fitness in the Long-Term Evolution Experiment with Escherichia coli

Open the record for dataset details and reuse information.

publicDec 2019View details →
dryad36/100

Data from: The diversity of cellular systems involved in carbonate precipitation by Escherichia coli

Open the record for dataset details and reuse information.

publicAug 2025View details →
dryad36/100

Data from: Phenotypic plasticity of antibiotic resistance, metabolism byproduct utilization and the evolution of mutually beneficial cooperation in Escherichia coli

Open the record for dataset details and reuse information.

publicMar 2024View details →
dryad36/100

Hypermutator emergence in experimental Escherichia coli populations is stress type dependent

Open the record for dataset details and reuse information.

publicApr 2023View details →
dryad36/100

Metabolic byproduct utilization and the evolution of mutually beneficial cooperation in Escherichia coli

Open the record for dataset details and reuse information.

publicFeb 2025View details →
dryad36/100

Genomic epidemiology of Escherichia coli: antimicrobial resistance through a One Health lens in sympatric humans, livestock and peri-domestic wildlife in Nairobi, Kenya

Open the record for dataset details and reuse information.

publicMar 2024View details →
dryad36/100

Single-cell phenotypic characteristics of tolerance under recurring antibiotic exposure in Escherichia coli

Open the record for dataset details and reuse information.

publicMay 2022View details →
dryad36/100

Data from: Evolution of a cross-feeding interaction following a key innovation in a long-term evolution experiment with Escherichia coli

Open the record for dataset details and reuse information.

publicAug 2023View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record