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133
datasets available to search
ShareScore release 0.9.0
Dataset results
133 results for “gene annotation”
Gibbon genome (Nleu3.0) custom gene annotation file
Open the record for dataset details and reuse information.
Data from: Gene prediction and annotation in Penstemon (Plantaginaceae): a workflow for marker development from extremely low-coverage genome sequencing
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Data from: Repertoire-wide gene structure analyses: a case study comparing automatically predicted and manually annotated gene models
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Contradictory of gene expression signatures for clinical prognostic prediction caused by update of reference genome and annotation
GEO Series GSE143486. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing.
Aegilops tauschii reference genome sequence Aet v5.0 including annotation of small RNAs and reannotation of protein-coding genes
GEO Series GSE169198. Aegilops tauschii. 6 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Genome, Functional Gene Annotation, and Nuclear Transformation of the Heterokont Oleaginous Alga Nannochloropsis oceanica CCMP1779
GEO Series GSE36959. Nannochloropsis oceanica. 2 samples. Type: Expression profiling by high throughput sequencing.
Temporal profiling and network analysis of rhythmic gene expression and novel functional gene annotation in the water flea, Daphnia pulex
GEO Series GSE67781. Daphnia pulex. 24 samples. Type: Expression profiling by array.
RNA sequencing of Cercospora zeina grown in vitro to annotate gene models
GEO Series GSE90705. Cercospora zeina. 7 samples. Type: Expression profiling by high throughput sequencing.
Epigenomic annotation of gene regulatory alterations during evolution of the primate brain
GEO Series GSE67978. Mus musculus; Macaca mulatta; Homo sapiens; Pan troglodytes. 98 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Annotation of snoRNA abundance across human tissues reveals complex snoRNA-host gene relationships
GEO Series GSE157846. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Transcriptome analysis of annotated coding genes and sORF at 74 accessions of A. thaliana
GEO Series GSE89805. Arabidopsis thaliana. 148 samples. Type: Expression profiling by array.
Transcriptome data used for gene annotation
GEO Series GSE77776. Sus scrofa. 92 samples. Type: Expression profiling by high throughput sequencing.
Massively parallel reporter assays with multi-layer annotation identified cell-type-specific functional variants and genes associated with melanoma (MPRA)
GEO Series GSE210354. Homo sapiens. 16 samples. Type: Other.
Ribosome Profiling Reveals Pervasive Translation Outside of Annotated Protein-Coding Genes
GEO Series GSE60095. Mus musculus; Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
A soil-grown wheat root atlas with validated cross-species cluster annotations allows to delineate conserved tissue specific marker genes
GEO Series GSE270342. Triticum aestivum. 3 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome data used for gene annotation
GEO Series GSE43892. Sus scrofa. 4 samples. Type: Expression profiling by high throughput sequencing.
Reference annotation for small RNA-producing genes in maize
GEO Series GSE77657. Zea mays. 10 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Cisplatin-induced decrease of mRNA length reveals functional and translated intronic-polyadenylation isoforms in the annotated 5’-untranslated region of genes
GEO Series GSE180930. Homo sapiens. 33 samples. Type: Expression profiling by high throughput sequencing; Other.
Functional annotation of genes differentially expressed between primary motor and prefrontal association cortices of macaque brain
GEO Series GSE37997. Macaca mulatta. 8 samples. Type: Expression profiling by array.
Cell-type specific meQTL extends melanoma GWAS annotation beyond eQTL and identifies a melanocyte gene regulatory network
GEO Series GSE166069. Homo sapiens. 106 samples. Type: Expression profiling by array.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.