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409
datasets available to search
ShareScore release 0.9.0
Dataset results
409 results for “genome organization”
De novo mutations in the genome organizer CTCF cause Intellectual Disability
GEO Series GSE46833. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Genomic nucleosome organization reconstituted with pure proteins
GEO Series GSE72106. Saccharomyces cerevisiae. 92 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide identification of FHY3 binding sites in Arabidopsis floral organ
GEO Series GSE69425. Arabidopsis thaliana. 11 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
A role for Snf2 related nucleosome spacing enzymes in genome-wide nucleosome organization
GEO Series GSE31833. Saccharomyces cerevisiae. 3 samples. Type: Expression profiling by array.
SATB2 organizes the 3D genome architecture of cognition in cortical neurons [CUT&RUN]
GEO Series GSE222608. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Systematic analysis of circadian gene expression mediated by epigenetic modification and 3D genome organization in Rice
GEO Series GSE213227. Oryza sativa Indica Group. 89 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Chromatin states and genomic organization impact local replication features and timing [ChIP-seq]
GEO Series GSE175750. Homo sapiens. 208 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Coupling chromosome organization to genome segregation in Archaea
GEO Series GSE297822. Sulfolobus acidocaldarius DSM 639. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Hormone Control Regions mediate steroid receptor-dependent genome organizations
GEO Series GSE109229. Homo sapiens. 60 samples. Type: Other.
Chromatin architecture in hexaploid wheat is hierarchically organized around genome territories and transcription factories (Wheat_Hi-C)
GEO Series GSE133882. Triticum aestivum. 2 samples. Type: Other.
Native nucleosomes intrinsically encode genome organization principles
GEO Series GSE252941. Mus musculus; synthetic construct; Homo sapiens. 199 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing.
Global organization of the B cell genome by the transcription factor Pax5 [Hi-C]
GEO Series GSE99151. Mus musculus. 30 samples. Type: Other.
The genome organization of Neurospora crassa at high-resolution uncovers principles of fungal chromosome topology
GEO Series GSE173593. Neurospora crassa. 10 samples. Type: Other.
Linkages between 3D genome organization and transcriptome during muscle cell development
GEO Series GSE84279. Mus musculus. 6 samples. Type: Other.
Correlated alterations in genome organization, histone methylation, and DNA-lamina interactions in Hutchinson-Gilford progeria syndrome (Hi-C)
GEO Series GSE41763. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Transcriptional programs of cell identity and p53-induced stress responses are associated with distinctive features of spatial genome organization [SuperSeries]
GEO Series GSE279021. Homo sapiens. 160 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other; Expression profiling by high throughput sequencing.
Nucleosome maps of the human cytomegalovirus genome reveal a temporal switch in chromatin organization linked to a major IE protein
GEO Series GSE48875. Human betaherpesvirus 5. 33 samples. Type: Genome binding/occupancy profiling by genome tiling array; Expression profiling by genome tiling array.
Antagonism between H3K27me3 and genome-lamina association drives atypical spatial genome organization in the totipotent embryo
GEO Series GSE218598. Mus musculus. 38 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Other.
Genome-wide mapping of histone modifications in two species of Leptosphaeria maculans showing contrasting genomic organization and host specialization
GEO Series GSE150127. Plenodomus lingam/Leptosphaeria maculans 'brassicae' group; Plenodomus lingam/Leptosphaeria maculans 'lepidii' group. 24 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Deciphering the role of 3D genome organization in breast cancer susceptibility (RNA-Seq)
GEO Series GSE184284. Rattus norvegicus. 13 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.