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169 results for “mass extinction”

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dryad32/100

Shifts in sexual dimorphism across a mass extinction in ostracods: implications for sexual selection as a factor in extinction risk

<p>Sexual selection often favors investment in expensive sexual traits that help individuals compete for mates. In a rapidly changing environment, however, allocation of resources to traits related to reproduction at the expense of those related to survival may elevate extinction risk. Empirical testing of this hypothesis in the fossil record, where extinction can be directly documented, is largely lacking. The rich fossil record of cytheroid ostracods offers a unique study system in this context: the male shell is systematically more elongate than that of females, and thus the sexes can be distinguished, even in fossils. Using mixture models to identify sex clusters from size and shape variables derived from the digitized valve outlines of adult ostracods, we estimated sexual dimorphism in ostracod species before and after the Cretaceous/Paleogene mass extinction in the United States Coastal Plain. Across this boundary, we document a substantial shift in sexual dimorphism, driven largely by a pronounced decline in the taxa with dimorphism indicating both very high and very low male investment. The shift away from high male investment, which arises largely from evolutionary changes within genera that persist through the extinction, parallels extinction selectivity previously documented during the Late Cretaceous under a background extinction regime. Our results suggest that sexual selection and the allocation of resources towards survival versus reproduction may be an important factor for species extinction during both background and mass extinctions. </p>

opencc-zeroAug 2020View details →
dryad32/100

Size variations in foraminifers from the Early Permian to the Late Triassic: implications for the Guadalupian-Lopingian and the Permian-Triassic mass extinctions

<p>The final 10 Myr of the Paleozoic saw two of the biggest biologic crises in Earth history: the Middle Permian extinction (often termed the Guadalupian-Lopingian extinction, GLE) that was followed 7–8 Myr later by Earth's most catastrophic loss of diversity, the Permian-Triassic mass extinction (PTME). These crises are not only manifest as sharp decreases in biodiversity and - particularly for the PTME - total ecosystem collapse, but they also drove major changes in biological morphological characteristics such as the Lilliput effect. The evolution of test size among different clades of foraminifera during these two extinction events has been less studied. We analyzed a global database of foraminiferal test size (volume) including 20226 specimens in 464 genera, 98 families, and 9 suborders from 632 publications. Our analyses reveal significant reductions in foraminiferal mean test size across the Guadalupian-Lopingian boundary (GLB) and the Permian-Triassic boundary (PTB), from 8.89 to 7.60 log10 μm3 (lg μm3), and from 7.25 to 5.82 lg μm3, respectively. The decline in test size across the GLB is a function of preferential extinction of genera exhibiting gigantism such as fusulinoidean fusulinids. Other clades show little change in size across the GLB. In contrast, all Lopingian suborders in our analysis (Fusulinina, Lagenina, Miliolina, and Textulariina) experienced a significant decrease in test size across the PTB mainly due to size-biased extinction and within-lineage change. The PTME was clearly a major catastrophe that affected many groups simultaneously, and the GLE was more selective, perhaps hinting at a subtler, less extreme driver than the later PTME.</p>

opencc-zeroSep 2020View details →
dryad32/100

Supplementary data from: Decoupling of morphological disparity and taxonomic diversity during the end-Permian mass extinction

<p>An increasing number of unexpectedly diverse benthic communities are being reported from microbially-precipitated carbonate facies in shallow-marine platform settings after the end-Permian mass extinction. Ostracoda, which was one of the most diverse and abundant metazoan groups during this interval, recorded their greatest diversity and abundance associated with these facies. Previous studies, however, focused mainly on their taxonomic diversity and, therefore, left room for discussion of paleoecological significance. Here, we apply a morphometric method (semi-landmarks) to investigate morphological variance through time to better understand the ecological consequences of the end-Permian mass extinction, and to examine the hypothesis that microbial mats played a key role in ostracod survival. Our results show that taxonomic diversity and morphological disparity were decoupled during the end-Permian extinction, and that morphological disparity declined rapidly at the onset of the end-Permian extinction, even though the high diversity of ostracods initially survived in some places. The decoupled changes in taxonomic diversity and morphological disparity suggest that the latter is a more robust proxy for understanding the ecological impact of the extinction event, and the low morphological disparity of ostracod faunas is a consequence of sustained environmental stress or a delayed post-Permian radiation. Furthermore, the similar morphological disparity of ostracods between microbialite and non-microbialite facies indicates that microbial mats most likely represent a taphonomic window rather than a biological refuge during the end-Permian extinction interval.</p>

opencc-zeroNov 2020View details →
dryad32/100

Data from: Within- and among-genus components of size evolution during mass extinction, recovery, and background intervals: a case study of Late Permian through Late Triassic foraminifera

One of the best-recognized patterns in the evolution of organismal size is the tendency for mean and maximum size within a clade to decrease following a major extinction event and to increase during the subsequent recovery interval. Because larger organisms are typically thought to be at higher extinction risk than their smaller relatives, it has commonly been assumed that size reduction mostly reflects the selective extinction of larger species. However, to our knowledge the relative importance of within- and among-lineage processes in driving overall trends in body size has never been compared quantitatively. In this study, we use a global, specimen-level database of foraminifera to study size evolution from the Late Permian through Late Triassic. We explicitly decompose size evolution into within- and among-genus components. We find that size reduction following the end- Permian mass extinction was driven more by size reduction within surviving species and genera than by the selective extinction of larger taxa. Similarly, we find that increase in mean size across taxa during Early Triassic biotic recovery was a product primarily of size increase within survivors and the extinction of unusually small taxa, rather than the origination of new, larger taxa. During background intervals we find no strong or consistent tendency for extinction, origination, or within- lineage change to move the overall size distribution toward larger or smaller sizes. Thus, size stasis during background intervals appears to result from small and inconsistent effects of within- and among-lineage processes rather than from large but offsetting effects of within- and among-taxon components. These observations are compatible with existing data for other taxa and extinction events, implying that mass extinctions do not influence size evolution by simply selecting against larger organisms. Instead, they appear to create conditions favorable to smaller organisms.

opencc-zeroDec 2011View details →
dryad32/100

Data from: Estimating the number of pulses in a mass extinction

Most previous work on the Signor-Lipps effect has focused on testing whether taxa in a mass extinction went extinct simultaneously or gradually. However, many authors have proposed scenarios in which taxa go extinct in distinct pulses. Little methodology has been developed for quantifying characteristics of such pulsed extinction events. Here we introduce a method for estimating the number of pulses in a mass extinction, based on the positions of fossil occurrences in a stratigraphic section. Rather than using a hypothesis test and assuming simultaneous extinction as the default, we reframe the question by asking what number of pulses best explains the observed fossil record. Using a two-step algorithm, we are able to estimate not just the number of extinction pulses, but also a confidence level or posterior probability for each possible number of pulses. In the first step, we find the maximum likelihood estimate for each possible number of pulses. In the second step, we calculate the Akaike Information Criterion (AIC) and Bayesian Information Criterion (BIC) weights for each possible number of pulses, and then apply a k-Nearest Neighbor classifier to these weights. This gives us a vector of confidence levels for the number of extinction pulses — for instance, we might be 80% confident that there was a single extinction pulse, 15% confident that there were two pulses, and 5% confidence that there were three pulses. Equivalently, we can state that we are 95% confidence that the number of extinction pulses is 1 or 2. Using simulation studies, we show that the method performs well in a variety of situations, although it has difficulty in the case of decreasing fossil recovery potential, and it is most effective for small numbers of pulses unless the sample size is large. We demonstrate the method using a dataset of Late Cretaceous ammonites.

opencc-zeroDec 2015View details →
dryad32/100

Data from: Static dental disparity and morphological turnover in sharks across the end-Cretaceous mass extinction

The Cretaceous–Palaeogene (K–Pg) mass extinction profoundly altered vertebrate ecosystems and prompted the radiation of many extant clades [1, 2]. Sharks (Selachimorpha) were one of the few larger-bodied marine predators that survived the K–Pg event and are represented by an almost-continuous dental fossil record. However, the precise dynamics of their transition through this interval remain uncertain [3]. Here, we apply 2D geometric morphometrics to reconstruct global and regional dental morphospace variation among Lamniformes (Mackerel sharks) and Carcharhiniformes (Ground sharks). These clades are prevalent predators in today's oceans, and were geographically widespread during the late Cretaceous–early Palaeogene. Our results reveal a decoupling of morphological disparity and taxonomic richness. Indeed, shark disparity was nearly static across the K–Pg extinction, in contrast to abrupt declines among other higher-trophic-level marine predators [4, 5]. Nevertheless, specific patterns indicate that an asymmetric extinction occurred among lamniforms possessing low-crowned/triangular teeth and that a subsequent proliferation of carcharhiniforms with similar tooth morphologies took place during the early Paleocene. This compositional shift in post-Mesozoic shark lineages hints at a profound and persistent K–Pg signature evident in the heterogeneity of modern shark communities. Moreover, such wholesale lineage turnover coincided with the loss of many cephalopod [6] and pelagic amniote [5] groups, as well as the explosive radiation of middle trophic-level teleost fishes [1]. We hypothesize that a combination of prey availability and post-extinction trophic cascades favored extant shark antecedents and laid the foundation for their extensive diversification later in the Cenozoic [7, 8, 9, 10].

opencc-zeroDec 2017View details →
dryad32/100

Data from: Competition in slow motion: the unusual case of benthic marine communities in the wake of the end-Permian mass extinction

Changes of community structure in response to competition usually take place on timescales that are much too short to be visible in the geological record. Here we report the notable exception of a benthic marine community in the wake of the end-Permian mass extinction, which is associated with the microbial limestone facies of the earliest Triassic of South China. The newly reported fauna is well preserved and extraordinarily rich (30 benthic macroinvertebrate species, including the new species Astartella? stefaniae (Bivalvia) and Eucochlis obliquecostata (Gastropoda)) and stems from an environmentally stable setting providing favourable conditions for benthic organisms. Whereas changes in the taxonomic composition are negligible over the observed time interval of 10–100 ka, three ecological stages are identified, in which relative abundances of initially rare species continuously increased at the cost of previously dominant species. Concomitant with the changes of dominant species is an increase in faunal evenness and heterogeneity. In the absence of both environmental and taxonomic changes, we attribute this pattern to the long-term effects of interspecific competition, which acted at an unusually slow pace because the number of competing species and potential immigrants was dramatically reduced by the end-Permian mass extinction. We suggest that these non-actualistic conditions led to decreased rates of niche differentiation and hence to the delayed rediversification of benthos that characterizes the aftermath of the greatest Phanerozoic mass extinction event. A hyperbolic diversification model is proposed, which accounts for the positive relationship between the intensity of interspecific competition and the rate of niche differentiation and resolves the conundrum of delayed rediversification at a time when niche space was largely vacated.

opencc-zeroDec 2014View details →
dryad32/100

Data from: The role of regional survivor incumbency in the evolutionary recovery of calcareous nannoplankton from the Cretaceous/Paleogene (K/Pg) mass extinction

The earliest Paleocene record of calcareous nannoplankton presents a unique opportunity to understand the evolutionary recovery of life from mass extinction. Nannoplankton were devastated at the Cretaceous/Paleogene boundary and their subsequent recovery can be studied in great detail because of their abundance in sediments, continuous stratigraphic occurrence, and near global distribution. Here we determine when and where new species of nannoplankton originated and how they dispersed following the Cretaceous/Paleogene mass extinction. Initially, we focus our efforts on North Pacific and South Atlantic deep sea sites with orbital age control to compare the precise timing and dynamics of the recovery between the locations. We then broaden our investigation to six sites from different basins and a variety of environments to study global patterns of the initial recovery. Our results show that many taxa in key Paleogene lineages originated in the North Pacific Ocean and that assemblages comprised primarily of new Paleogene taxa were not observed at other sites for several hundred thousand years. Survivors that were adapted to eutrophic post extinction conditions rapidly expanded in Southern Hemisphere sites where they dominated assemblages for most of the initial recovery. We therefore hypothesize that groups of survivors formed regionally incumbent assemblages in the Southern Hemisphere that limited diversification and dispersal of new Paleogene taxa. The end of survivor dominance correlates to the recovery of the biologic pump and subsequent decrease in surface ocean nutrient concentration 300–400 Kyr after the boundary. Only after survivors were removed did new Paleogene nannoplankton assemblages become abundant globally. Our results indicate that competition from regionally incumbent survivors was as an important control on the K/Pg recovery of nannoplankton.

opencc-zeroDec 2014View details →
dryad32/100

Data from: Early and Middle Triassic trends in diversity, evenness, and size of foraminifers on a carbonate platform in south China: Implications for tempo and mode of biotic recovery from the end-Permian mass extinction

Delayed biotic recovery from the end-Permian mass extinction has long been interpreted to result from environmental inhibition. Recently, evidence of more rapid recovery has begun to emerge, suggesting the role of environmental inhibition was previously overestimated. However, there have been few high-resolution taxonomic and ecological studies spanning the full Early and Middle Triassic recovery interval, leaving the precise pattern of recovery and underlying mechanisms poorly constrained. In this study, we document Early and Middle Triassic trends in taxonomic diversity, assemblage evenness, and size distribution of benthic foraminifers on an exceptionally-exposed carbonate platform in south China. We observe gradual increases in all metrics through Early Triassic and earliest Middle Triassic time, with stable values reached early in the Anisian. There is little support in our dataset for a substantial Early Triassic lag interval during the recovery of foraminifers or for a step-wise recovery pattern. The recovery pattern of foraminifers on the GBG corresponds well with available global data for this taxon and appears to parallel that of many benthic invertebrate clades. Early Triassic diversity increase in foraminifers was more gradual than in ammonoinds and conodonts. However, foraminifers continued to increase in diversity, size, and evenness into Middle Triassic time, whereas diversity of ammonoids and conodonts declined. These contrasts suggest decoupling of recovery between benthic and pelagic environments; it is unclear whether these discrepancies reflect inherent contrasts in their evolutionary dynamics or the differential impact of Early Triassic ocean anoxia or associated environmental parameters on benthic ecosystems.

opencc-zeroDec 2009View details →
dryad32/100

Data from: Moorean and Tahitian Partula tree snail survival after a mass extinction: new genomic insights using museum specimens

Natural history museum collections provide a biodiversity window into the past and are of particular importance to the study of extinction-impacted clades such as the Pacific Island tree snail family Partulidae. Deliberate introduction of the predatory rosy wolf snail Euglandina rosea in the late 20th century led to the extinction/extirpation of 55/61 Society Island Partulidae species. In this study, we phylogenomically investigated the inter-relationships of the three surviving Society Island valley Partula species: P. taeniata (Moorea), P. clara and P. hyalina (Tahiti). All three formed a distinct clade in earlier mitochondrial phylogenies. Using Next Generation Sequencing (NGS) double digested Restriction Associated DNA sequencing (ddRADseq), we found that 46-year-old lyophilized museum specimens produced similar numbers of reads, sequencing depth, and loci as 10-year old ethanol-preserved collections. Phylogenomic trees indicated that Tahitian P. clara and P. hyalina are the result of a single founding lineage from Moorea, contrasting previous mitochondrial results and clarifying the enigmatic taxonomic status of P. c. incrassa. Our study highlights the utility and viability of NGS techniques for museum specimens and their increased resolution of evolutionary patterns. Sampling will be expanded to include the remaining Society Island partulid taxa to further explore the evolutionary history of this radiation.

opencc-zeroDec 2015View details →
zenodo32/100

Research Data for 'Oxic conditions in shallow marine settings during the Permian-Triassic Mass Extinction'

<p>Complete geochemical data set &nbsp;for Siusi/Seis including bulk major, minor and trace element data as well as TOC and mercury content.</p>

opencc-by-4.0Sep 2024View details →
dryad32/100

Bivalve body size distribution through the Late Triassic mass extinction event

<p><span>The synergic relationship between physiology, ecology and evolutionary process makes the body size distribution (BSD) an essential component of the community ecology. Body size is highly susceptible to environmental change, and extreme upheavals, such as during a mass extinction event, could exert drastic changes on a taxon's BSD. It has been hypothesized that the Late Triassic mass extinction event (LTE) was triggered by intense global warming, linked to massive volcanic activity associated with the Central Atlantic Magmatic Province. We test the effects of the LTE on the BSD of fossil bivalve assemblages from three study sites spanning the Triassic/Jurassic boundary in the UK.</span> <span>Our results show that the effects of the LTE were rapid and synchronous across sites, and the BSDs of the bivalves record drastic changes associated with species turnover. No phylogenetic signal of size selectivity was recorded, although semi-infaunal species were apparently most susceptible to change. Each size class had the same likelihood of extinction during the LTE, which resulted in a platykurtic BSD with negative skew.  The immediate post-extinction assemblage exhibits a leptokurtic BSD although with negatively skewed, where surviving species and newly appearing small-sized colonizers exhibit body sizes near the modal size. Recovery was relatively rapid (~100kyr), and larger bivalves began to appear during the Pre-Planorbis Zone, despite recurrent dysoxic/anoxic conditions. This study demonstrates how a mass extinction acts across the size spectrum in bivalves and shows how BSDs emerge from evolutionary and ecological processes.</span></p>

opencc-zeroNov 2021View details →
zenodo32/100

Late Triassic carbon isotope anomalies in the Canadian Cordillera: Paleoenvironmental disturbances associated with the Norian/Rhaetian boundary and end-Triassic mass extinction event

<p>Appendices for "Late Triassic carbon isotope anomalies in the Canadian Cordillera: Paleoenvironmental disturbances associated with the Norian/Rhaetian boundary and end-Triassic mass extinction event".</p>

opencc-by-4.0Aug 2024View details →
dryad32/100

Data from: Ecological continuity and transformation after the Permo-Triassic mass extinction in northeastern Panthalassa

The Permo-Triassic mass extinction (PTME) is often implicated in the transition from the Paleozoic Evolutionary Fauna (PEF) to the Modern Evolutionary Fauna (MEF). However the exact timing and details of this progression are unknown, especially regarding the vacating and filling of functional ecological space after the PTME. Here we quantify the functional diversity of middle Permian and Early Triassic marine paleocommunities in the western US to determine functional re-organization in the aftermath of the PTME. Results indicate that while the PTME was selective in nature, many new Triassic taxa either re-filled functional roles of extinct Permian taxa or performed the same functional roles as Permian survivors. Despite this functional overlap, Permian survivors and new Triassic taxa differed significantly in their relative abundances within those overlapping functions. This shift in numerical emphasis, driven by an increase in abundance towards more MEF-style traits, may represent a first step in the transition between the PEF and MEF. We therefore suggest that the extreme impact of the PTME had significant and permanent re-organizational effects on the intrinsic structure of marine ecosystems. Early Triassic ecosystems likely bridged the gap between the Paleozoic and Modern Evolutionary Faunas, as newly originated Triassic taxa shared ecospace with Permian survivors, but shifted functional emphasis.

opencc-zeroDec 2018View details →
dryad32/100

Data from: A shift in the long-term mode of foraminiferan size evolution caused by the end-Permian mass extinction

Size is among the most important traits of any organism, yet the factors that control its evolution remain poorly understood. In this study, we investigate controls on the evolution of organismal size using a newly compiled database of nearly 25,000 foraminiferan species and subspecies spanning the past 400 million years. We find a transition in the pattern of foraminiferan size evolution from correlation with atmospheric pO2 during the Paleozoic (400-250 Mya) to long-term stasis during the post-Paleozoic (250 Mya to present). Thus, a dramatic shift in the evolutionary mode coincides with the most severe biotic catastrophe of the Phanerozoic (543 Mya to present). Paleozoic tracking of pO2 was confined to Order Fusulinida, whereas Paleozoic lagenides, miliolids, and textulariids were best described by the stasis model. Stasis continued to best describe miliolids and textulariids during post-Paleozoic time, while random walk was the best supported mode for the other diverse orders. The shift in evolutionary dynamics thus appears to have resulted primarily from the selective elimination of fusulinids at the end of the Permian Period. These findings illustrate the potential for mass extinction to alter macroevolutionary dynamics for hundreds of millions of years.

opencc-zeroDec 2011View details →
dryad32/100

Data from: Recovery of benthic marine communities from the end-Permian mass extinction at the low-latitudes of Eastern Panthalassa

Based on the quantitative community analysis using species-level identifications, we track the restoration of benthic ecosystems after the end-Permian mass extinction throughout the Lower Triassic of the western USA. New data on the palaeoecology of the Thaynes Group and Sinbad Formation are provided, which fill a gap between the recently studied palaeoecology of the Griesbachian–Dienerian Dinwoody Formation and the Spathian Virgin Formation. In the Sinbad Formation and Thaynes Group, 17 species (12 genera) of bivalves, 7 species and genera of gastropods and 2 species and genera of brachiopods are recognized. The new bivalve genus Confusionella (Pteriidae) is described. A comprehensive review of the whole Lower Triassic succession of benthic ecosystems of the western USA indicates that mid- and inner shelf environments show incipient recovery signals around the Griesbachian–Dienerian transition, during the Smithian and, most profound, during the early Spathian. Ecological data from youngest strata of the Dinwoody Formation as well as stratigraphic ranges of species suggest that the late Dienerian was likely a time interval of environmental stress for benthic ecosystems. Despite some evidence for short-term environmental disturbances (e.g. shift of dominant taxa, transient drop in alpha-diversity) during the Smithian–Spathian transition, benthic ecosystems did not show any notable taxonomic turnover at that time, in contrast to the major crisis that affected ammonoids and conodonts. Whereas alpha-diversity of benthic communities generally increased throughout the Early Triassic, beta-diversity remained low, which reflects a persistently wide environmental range of benthic species. This observation is in accordance with a recently proposed model that predicts a time lag between increasing within-habitat diversity (alpha-diversity) and the onset of taxonomic differentiation between habitats (beta-diversity) during biotic recoveries from mass extinction events. The observation that beta-diversity had not significantly increased during the Early Triassic might also provide an explanation for the comparably sluggish increase in benthic diversity during that time, which has previously been attributed to persistent environmental stress.

opencc-zeroDec 2012View details →
zenodo32/100

Data for: Rapid increase in snake dietary diversity and complexity following the end-Cretaceous mass extinction

<p>Datasets and codes associated with the manuscript &quot;Rapid increase in snake dietary diversity and complexity following the end-Cretaceous mass extinction&quot;</p>

opencc-by-4.0Sep 2021View details →
dryad32/100

Data from: Can body mass and skull morphology predict seed and fruit ingestion potential for mammal species? A test using extant species and its application to extinct species

<p>Larger animals are assumed to ingest larger seeds and consume larger fruits, but empirical studies reveal inconsistent trends between body mass and the average size of fruits and seeds ingested. Further, no studies have explored seed size relationships with morphological traits, such as skull dimensions. Such characteristics might provide more reliable estimates of ingestion ability and allow for accurate predictions of seed dispersal capacity in species for which we lack empirical data, especially extinct species. To determine whether (i) mammalian skull dimensions are better predictors of the maximum size of ingested seeds and fruits, compared to body mass and (ii) body mass are the better predictors of mean fruit and seed sizes, we studied these relationships across three mammalian orders: Chiroptera, Primates, and Carnivora.</p> <p>We collected novel data on skull dimensions and collated available data on body mass and maximum and mean sizes of ingested fruits and seeds for mammals (N=100) across the Neotropics, Asia, Africa, and Madagascar. We explored the relationships between anatomical traits and fruit and seed sizes of extant species and made predictions for five extinct species.</p> <p>Our results revealed that body mass and skull dimensions are essential determinants of ingested fruit and seed size in mammals. The latter traits can generate predictions for extinct species, especially coronoid height and maximum jaw gape. Nevertheless, body mass predicted larger ingested fruits and seeds than skull dimensions and explained a greater part of the variance for both maximum and mean sizes in our dataset.</p> <p>Our results show how body mass and cranial anatomy constrain seed size and reinforce the importance of maintaining functional diversity in seed dispersers to maintain tropical forest structure. We also show that scientists can use morphological characteristics to predict the seed dispersal potential of extinct mammals allowing better inferences on past and future consequences of frugivore extinctions within tropical forests.</p>

opencc-zeroFeb 2023View details →
zenodo32/100

Mercury isotope evidence for marine photic zone euxinia across the end-Permian mass extinction

<p>The compiled geochemical data used for plots in the main manuscipt&nbsp;</p>

opencc-by-4.0Apr 2023View details →
zenodo32/100

Body size and geographic distribution of foraminiferal specimens during the Frasnian-Famennian (Frasnian), Guadalupian-Lopingian (Capitanian), Permian-Triassic (Changhsingian), Triassic-Jurassic (Rhaetian), and Cretaceous-Paleogene (Maastrichtian) mass extinctions.

<p>This dataset is about body size and geographic distribution of foraminiferal specimens during the Frasnian-Famennian (Frasnian), Guadalupian-Lopingian (Capitanian), Permian-Triassic (Changhsingian), Triassic-Jurassic (Rhaetian), and Cretaceous-Paleogene (Maastrichtian) mass extinctions.</p> <p>Foraminiferal body size data collection</p> <p>First, we collected published papers with foraminiferal images from the Frasnian (382.7-372.2 Ma), Capitanian (264.28-259.51 Ma), Changhsingian (254.14-251.902 Ma), Rhaetian (208.5-201.3 Ma), and Maastrichtian (72.1-66.1 Ma). Second, we measured two primary axes of specimens, such as maximum length and height in a conical or cylindrical shell. For some specimens, where there is no way to measure the length of both axes, we calculate the length of the unknown axis based on the aspect ratio of the type species. Third, we used the test volume as a standard indicator of body size, taking into account the diversity of foraminiferal morphology. Finally, the test volumes were calculated on a logarithmic scale with base 10 due to large individual differences, and the specific calculation is shown in Feng et al. (2020).</p>

opencc-by-4.0Jul 2023View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record