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295
datasets available to search
ShareScore release 0.9.0
Dataset results
295 results for “midbrain”
Single cell RNA sequencing profile of 60 day old human iPSC-derived midbrain organoids from healthy individual, Parkinson’s disease patient (Miro1 p.R272Q mutation) and its isogenic control
GEO Series GSE264097. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
microRNA counts from midbrain (ENCSR347QCM)
GEO Series GSE220361. Mus musculus. 2 samples. Type: Non-coding RNA profiling by array.
ChIP-seq from midbrain (ENCSR545BRW)
GEO Series GSE82772. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Reduced synaptic activity and dysregulated extracellular matrix pathways in midbrain neurons from Parkinson’s disease patient
GEO Series GSE207533. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.
Biphasic activation of WNT signaling enhances the derivation of midbrain dopamine neurons for translational use.
GEO Series GSE162884. Homo sapiens. 20 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Gene expression profile of healthy control organoids, a Parkinson disease patient specific midbrain organoid carrying a triplication in the SNCA gene and two healthy control organoids co-cultured with
GEO Series GSE275820. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Molecular analysis of the midbrain dopaminergic niche during neurogenesis
GEO Series GSE117394. Mus musculus. 60 samples. Type: Expression profiling by high throughput sequencing.
Distinct microRNA signatures define sporadic PSP-RS and PD in patient-derived midbrain organoids
GEO Series GSE294029. Homo sapiens. 27 samples. Type: Non-coding RNA profiling by high throughput sequencing.
The Obesity-associated Fto gene regulates activity of the dopaminergic midbrain circuitry [FTO KO]
GEO Series GSE47216. Mus musculus. 6 samples. Type: Other; Methylation profiling by high throughput sequencing.
Gene expression profiles in mouse embryonic midbrain of Wnt1-lineage specific Gpr161 deletion.
GEO Series GSE185336. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics n the postmortem brains of severe acute COVID19 [midbrain]
GEO Series GSE274938. Homo sapiens. 79 samples. Type: Other.
Repeated cocaine or methamphetamine treatment alters astrocytic CRF2 and GLAST expression in the ventral midbrain: RNA sequencing data
GEO Series GSE184497. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.
BrainSTEM: A multi-resolution fetal brain atlas to assess the fidelity of human midbrain cultures
GEO Series GSE281535. Homo sapiens. 48 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome analysis of purified microglial cells from striatum and midbrain
GEO Series GSE133617. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.
DNase-seq from midbrain (ENCSR767AJS)
GEO Series GSE83182. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ChIP-seq from midbrain (ENCSR487RAU)
GEO Series GSE82734. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ChIP-seq from midbrain (ENCSR347BFO)
GEO Series GSE82627. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Evaluating the mouse neural precursor line, SN4741, as a suitable proxy for midbrain dopaminergic neurons [scRNA-seq]
GEO Series GSE225076. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
total RNA-seq from midbrain (ENCSR764OPZ)
GEO Series GSE88517. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
ChIP-seq from midbrain (ENCSR081UQY)
GEO Series GSE82412. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.