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508 results for “natural evolution”
Data from: Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (Hymenoptera: Formicidae)
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Data from: Natural selection and repeated patterns of molecular evolution following allopatric divergence
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Fig 70 in ClassiIication, Natural History, and Evolution oI the SubIamily Peloniinae OPITZ (Coleoptera, Cleroidea, Cleridae). Part XIII. The New World genera oI checkered beetles of the Labasiella complex
Fig 70: The known geographic distribution of species as noted.
Figs 59-60 in ClassiIication, Natural History, and Evolution oI the SubIamily Peloniinae OPITZ (Coleoptera, Cleroidea, Cleridae). Part XIII. The New World genera oI checkered beetles of the Labasiella complex
Figs 59-60: Head and antenna of Amphelissus meieri. (59) Head, ventral view. (60) Antenna.
Figs 57-58 in ClassiIication, Natural History, and Evolution oI the SubIamily Peloniinae OPITZ (Coleoptera, Cleroidea, Cleridae). Part XIII. The New World genera oI checkered beetles of the Labasiella complex
Figs 57-58: Head and mouthparts of Amphelissus meieri. (57) Head, frontal view. (58) Mouthparts.
Fig. 90-91 in Classification, Natural History, and Evolution of the Subfamily Peloniinae O (Coleoptera: Cleroidea: Cleridae). Part IX. Taxonomic revision of the New World genus Muisca S
Fig. 90-91: Metatarsus. (90) M. octonotata, ungues. (91) M. octonotata, 4th tarsomere.
Fig. 96 in Classification, Natural History, and Evolution of the Subfamily Peloniinae O (Coleoptera: Cleroidea: Cleridae). Part IX. Taxonomic revision of the New World genus Muisca S
Fig. 96: Geographic distribution of Muisca species as listed.
Data from: Population genomics of rapid evolution in natural populations: polygenic selection in response to power station thermal effluents
Background: Examples of rapid evolution are common in nature but difficult to account for with the standard population genetic model of adaptation. Instead, selection from the standing genetic variation permits rapid adaptation via soft sweeps or polygenic adaptation. Empirical evidence of this process in nature is currently limited but accumulating. Results: We provide genome-wide analyses of rapid evolution in two Fundulus heteroclitus populations subjected to recently elevated temperatures due to coastal power station thermal effluents. Bayesian and multivariate analyses of population genomic structure reveal a substantial portion of genetic variation that is most parsimoniously explained by selection at the site of thermal effluents. An FST outlier approach in conjunction with additional conservative requirements identify significant allele frequency differentiation that exceeds neutral expectations among exposed and closely related reference populations. Genomic variation patterns near these candidate loci reveal that individuals living near thermal effluents have rapidly evolved from the standing genetic variation through small allele frequency changes at many loci in a pattern consistent with polygenic selection on the standing genetic variation. Conclusions: While the ultimate trajectory of selection in these populations is unknown, our findings suggest that polygenic models of adaptation may play important roles in large, natural populations experiencing recent selection due to environmental changes that cause broad physiological impacts.
Evolution of sympatric host-specialized lineages of the fungal plant pathogen Zymoseptoria passerinii in natural ecosystems
<p>This repository contains the data sets from the research paper "Evolution of sympatric host-specialized lineages of the fungal plant pathogen <em>Zymoseptoria passerinii</em> in natural ecosystems"</p>
Natural selection drives genome-wide evolution via chance genetic associations
<p>Understanding selection's impact on the genome is a major theme in biology. Functionally-neutral genetic regions can be affected indirectly by natural selection, via their statistical association with genes under direct selection. The genomic extent of such indirect selection, particularly across loci not physically linked to those under direct selection, remains poorly understood, as does the time scale at which indirect selection occurs. Here we use field experiments and genomic data in stick insects, deer mice and stickleback fish to show that widespread statistical associations with genes known to affect fitness cause many genetic loci across the genome to be impacted indirectly by selection. This includes regions physically distant from those directly under selection. Then, focusing on the stick insect system, we show that statistical associations between SNPs and other unknown, causal variants result in additional indirect selection in general and specifically within genomic regions of physically linked loci. This widespread indirect selection necessarily makes aspects of evolution more predictable. Thus, natural selection combines with chance genetic associations to affect genome-wide evolution across linked and unlinked loci and even in modest-sized populations. This process has implications for the application of evolutionary principles in basic and applied science.</p>
Phenotypic and Genetic data for "Evolution of fruit and seed traits during almond naturalization"
<p>1- Cultivated plant species often naturalize and enter wild communities in a process known as feralization. To successfully feralize, crops must overcome ecological barriers and may undergo selection on certain traits, diverging phenotypically and genetically from their crop ancestors. In spite of the agronomic and ecological relevance of crop feralization, the eco-evolutionary dynamics driving it remain understudied.</p> <p>2- In this paper, we evaluated phenotypic and genotypic differentiation in fruit and seed traits during the naturalization of the almond tree (Prunus dulcis (Mill.) D.A. Webb) in SE Iberia and evaluated the potential role of natural selection in this process. To do so, we investigated patterns of genetic divergence between cultivated and feral populations using functional (the cyanogenesis Sk gene) and neutral (17 SSR loci) markers and analyzed morphological and biochemical traits in kernels of 342 individuals from 15 cultivated and 24 feral populations.</p> <p>3- We detected very little genetic differentiation in neutral markers between cultivated and feral populations. The majority of the observed genetic variation was due to differences within each type. Conversely, the recessive allele sk responsible for seed toxicity was significantly more frequent in feral populations. Phenotypic differentiation between cultivated and naturalized almond populations was also significant. Feral almond kernels were smaller and lighter, had denser and more resistant shells (endocarps) and more toxic seeds. Selection analyses indicated that these genetic and phenotypic patterns might be driven by directional selection on fruit and seed traits, potentially linked to defense against predation.</p> <p>4- Synthesis. Our findings indicate that almond naturalization is consistent with strong directional selection on fruits and seeds, leading to smaller and more toxic seeds encased in harder endocarps. Accordingly, we propose that feralization of this crop is, at least to some degree, driven by adaptive evolution of dispersal and recruitment traits.</p>
Exploring the interplay between natural and intersexual selection on the evolution of a cognitive trait
<p><span>There has been an increased focus on the role of natural and sexual selection in shaping cognitive abilities, but the importance of the interaction between both forces remain largely unknown. Intersexual selection through female mate choice might be an important driver of the evolution of cognitive traits, especially in monogamous species, where females may obtain direct fitness benefits by choosing mates with better cognitive abilities. However, the importance given by females to male cognitive traits might vary among species and/or populations according to their life-history traits and ecology. To disentangle the effects of natural and sexual selection, here we use an agent-based simulation model and compare the model's predictions when females mate with the first randomly encountered male (i.e. under natural selection) versus when they choose among males based on their cognitive trait values (i.e. under natural and intersexual selection). Males and females are characterized, respectively, by their problem-solving ability and assessment strategy. At each generation, agents go through (1) a choosing phase during which females assess the cognitive abilities of potential mates until eventually finding an acceptable one, and (2) a reproductive phase during which all males compete for limited resources that are exploited at a rate which depends on their cognitive abilities. Because males provide paternal care, the foraging success of mated males determines the breeding success of the pair through its effect on nestling provisioning efficiency. The model predicts that intersexual selection plays a major role in most ecological conditions, by either reinforcing or acting against the effect of natural selection. The latter case occurs under harsh environmental conditions, where intersexual selection contributes to maintaining cognitive diversity. Our findings thus demonstrate the importance of considering the interaction between both selective forces and highlight the need to build a conceptual framework to target relevant cognitive traits.</span></p>
Following Darwin's footsteps: Evaluating the impact of an activity designed for elementary school students to link historically important evolution key concepts on their understanding of natural selection
<p>While several researchers have suggested that evolution should be explored from the initial years of schooling, little information is available on effective resources to enhance elementary school students' level of understanding of evolution by natural selection (LUENS). For the present study, we designed, implemented and evaluated an educational activity planned for fourth graders to explore concepts and conceptual fields that were historically important for the discovery of natural selection. Observation field notes and students' productions were used to analyse how the students explored the proposed activity. Additionally, an evaluation framework consisting of a test, the evaluation criteria and the scoring process was applied in two fourth-grade classes to estimate elementary school students' LUENS before and after engaging in the activity. Our results suggest that our activity allowed students to effectively link all of the key concepts in the classroom and produced a significant increase in their LUENS. These results indicate that our activity had a positive impact on students' understanding of natural selection. They also reveal that additional activities and minor fine-tuning of the present activity are required to further support students' learning about the concept of differential reproduction. We also observed a low level of teleological predictions for both pre- and post-tests. --</p>
Ecology and evolution of competitive trait variation in natural phytoplankton communities under selection
<p>Competition for limiting resources is a major force structuring ecological communities. Species minimum resource requirements (<em>R*</em>s) can predict competitive outcomes and evolve under selection in simple communities under controlled conditions. However, whether <em>R*</em>s predict competitive outcomes or demonstrate adaptive evolution in naturally complex communities is unknown. We subjected natural phytoplankton communities to three types of resource limitation (nitrogen, phosphorus, light) in outdoor mesocosms over ten weeks. We examined the community composition weekly and isolated 21 phytoplankton strains from seven species to quantify responses to selection of R* for these resources. We investigated evolutionary change in R*s in the dominant species, <em>Desmodesmus armatus</em>. <em>R*</em>s were good predictors of species changes in relative abundance, though this was largely driven by the success of <em>D. armatus </em>across several treatments. This species also demonstrated evolutionary change in <em>R*</em>s under resource limitation, supporting the potential for adaptive trait change to modify competitive outcomes in natural communities.</p>
Genome-wide association analysis identifies naturally segregating genetic variation associated with the rapid evolution of diapause in Aedes albopictus, an invasive vector mosquito.
<p>The raw data for genotype calls, the output files from the genotype calls, the code to replicate the analysis, and the output of the analysis.</p>
Figs. 181–195. Antennal clubs. 181. Plocamocera confrater. 182. P. procera. 183. P in Classification, Natural History, And Evolution Of The Epiphloeinae (Coleoptera: Cleridae). Part Ii. The Genera Chaetophloeus Opitz And Plocamocera Spinola
Figs. 181–195. Antennal clubs. 181. Plocamocera confrater. 182. P. procera. 183. P. manausensis.
Map 12 in Classification, Natural History, And Evolution Of The Epiphloeinae (Coleoptera: Cleridae). Part Ii. The Genera Chaetophloeus Opitz And Plocamocera Spinola
Map 12. Distribution of Chaetophloeus hispidus.
Fig. 1 in Classification, Natural History, And Evolution Of The Epiphloeinae (Coleoptera: Cleridae). Part Ii. The Genera Chaetophloeus Opitz And Plocamocera Spinola
Fig. 1. Speciation event in population Aa involving times X to Z (see Phyllogenetic Methods).
Maps 8–11 in Classification, Natural History, And Evolution Of The Epiphloeinae (Coleoptera: Cleridae). Part Ii. The Genera Chaetophloeus Opitz And Plocamocera Spinola
Maps 8–11. Distribution of Plocamocera jayhawkalis, P. procera, P.selva, P. buenavista.
Maps 1–3 in Classification, Natural History, And Evolution Of The Epiphloeinae (Coleoptera: Cleridae). Part Ii. The Genera Chaetophloeus Opitz And Plocamocera Spinola
Maps 1–3. (1) Distribution of Plocamocera castanea; (2) Distribution of Plocamocera confrater;
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.