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zenodo48/100

Lagrangian overturning in the eastern subpolar North Atlantic Ocean - ORCA025-GJM189 Particle Trajectory Dataset

<p>This dataset contains the output of Lagrangian particle tracking experiments using 5-day mean velocity and hydrographic&nbsp;fields from the ORCA025-GJM189 ocean sea-ice model hindcast configured during the&nbsp;Drakkar project in which numerical particles are initialised along the northward&nbsp;inflows across the Overturning in the Subpolar North Atlantic Program (OSNAP) East&nbsp;section. Particles are advected using a bespoke version of TRACMASS v7.1 Lagrangian&nbsp;particle tracking tool using the regular step-wise stationary advection scheme and&nbsp;an adapted implementation of the vertical turbulent mixing parameterisation created&nbsp;by Paris et al. (2013) for the Connectivity Modelling System Lagrangian particle&nbsp;tracking tool. This vertical turbulent mixing scheme only acts on particles found&nbsp;within the surface mixed layer (as evaluated along particle trajectories) and&nbsp;randomly reshuffles them according to a maximum vertical velocity of 10 cm/s -&nbsp;characteristic of vertical convective plumes. Note, particles cannot be artificially&nbsp;subducted across the base of the mixed layer into the ocean interior using this scheme.</p> <p>Particles are initialised on the first-available day of each month (based on the&nbsp;centre of the model fields 5-day mean windows) between 1976 and 2008 (inclusive)&nbsp;before being advected within the Iceland and Irminger Basins until any one of three&nbsp;termination conditions are met: 1) particles return southward across OSNAP East,&nbsp;2) particles flow northward across the Greenland-Scotland Ridge, or 3) particles reach&nbsp;the maximum advection time of 7-years. The 7-year maximum advection time ensures &gt;99.1%&nbsp;of all initialised particles meet one of conditions 1) or 2), hence only 0.9% of all&nbsp;particles are terminated between OSNAP East and the Greenland-Scotland Ridge.</p> <p>The number of particles initialised in each model-grid cell scales with the total&nbsp;northward transport through that cell, such that the maximum possible transport&nbsp;conveyed by any single particle is 2.5 mSv (mSv == 1E-3 Sv),&nbsp;enabling&nbsp;the calculation of robust Lagrangian statistics.</p> <p>Particle locations (referenced to the original ORCA025 model grid) and properties&nbsp;(potential temperature, salinity, potential density and local mixed layer depth)&nbsp;are stored in the output files on every model-grid cell crossing. TRACMASS determines&nbsp;particle&nbsp;properties on grid-cell crossings by taking the average of the properties stored at the&nbsp;nearest two T-grid points.</p> <p>In total, four Lagrangian experiments were conducted at the&nbsp;Department of Earth Sciences,&nbsp;University of Oxford.&nbsp;Please see README.md for a full description of all&nbsp;Lagrangian experiments and the accompanying output files.</p> <p><strong>For a complete description of the ORCA025-GJM189 hindcast&nbsp;configuration see:</strong>&nbsp;https://github.com/meom-configurations/ORCA025.L75-GJM189.</p> <p><strong>For a complete description of TRACMASS v7.1 see</strong>:&nbsp;https://github.com/TRACMASS/tracmass</p>

opencc-by-4.0May 2022View details →
zenodo48/100

Seasonal to decadal western boundary current variability from sustained ocean observations

<p>&nbsp;</p> <p>Cross-transect velocity time series for HR-XBT transects IX21, PX30, and PX40 in support of:&nbsp;<a href="http://doi.org/10.1029/2022GL097834">Chandler et al.&nbsp;(2022).&nbsp;Seasonal to decadal western boundary current variability from sustained ocean observations.</a>&nbsp;</p> <p>&nbsp;</p> <p>Each netcdf file includes the following variables:</p> <ul> <li>time</li> <li>longitude</li> <li>latitude</li> <li>depth</li> <li>vel</li> <li>gvel_LNM</li> <li>long_for_vel_err</li> <li>lat_for_vel_err</li> <li>vel_err</li> <li>wbc_transport</li> </ul> <p>&nbsp;</p> <p>See also&nbsp;<a href="https://github.com/mlchandler/wbc_sustained_obs">https://github.com/mlchandler/wbc_sustained_obs</a></p>

opencc-by-4.0Jun 2022View details →
zenodo48/100

A Global Data Set of Present-Day Oceanic Crustal Age and Seafloor Spreading Parameters

<p>Datasets of&nbsp;present-day oceanic crustal age and seafloor spreading parameters from Seton et al. (2020).</p> <p>This&nbsp;dataset contains:</p> <ul> <li>Animations: animations of the present-day age grid and seafloor spreading parameters in both low and high resolution</li> <li>Feature Data: GPlates compatible files (*.gpml and *.rot)&nbsp;consistent&nbsp;with and used to create this dataset. Preferred magnetic anomaly picks are also included.</li> <li>Grids: Gridded datasets (netCDF-4 and netCDF-3) of present-day age,&nbsp;rate, asymmetry, direction, obliquity, confidence, and age misfit (in&nbsp;v1.1 only) in 6 minute resolution. Age grids are also provided in&nbsp;1 and 2 minute resolution as netCDFs, and as 6 minute xyz files.</li> <li>Images: Images of the present-day age grid and seafloor spreading parameters</li> <li>Workflows: the latest workflow to create the present-day&nbsp;age grid can be found on GitHub:&nbsp;https://github.com/EarthByte/presentday-agegridding&nbsp;</li> </ul> <p>These files can also be downloaded from the EarthByte website <a href="https://earthbyte.org/webdav/ftp/earthbyte/agegrid/2020/">here</a>,&nbsp;and the global plate motion model can be found online <a href="https://www.earthbyte.org/webdav/ftp/Data_Collections/Muller_etal_ 2019_Tectonics">here</a>.</p> <p><strong>Please cite the dataset as:</strong><br> Seton, M., M&uuml;ller, R. D., Zahirovic, S., Williams, S., Wright, N. M., Cannon, J., et al. (2020). A global data set of present‐day oceanic crustal age and seafloor spreading parameters. <em>Geochemistry, Geophysics, Geosystems</em>, 21, e2020GC009214. https://doi.org/10.1029/2020GC009214</p>

opencc-by-4.0Sep 2020View details →
zenodo48/100

Ensemble of NEMO present-day (1989-2009) and future (2080-2100 under RCP8.5) ocean properties and ice shelf melt rates in the Amundsen Sea

<p>Model outputs used in <a href="https://www.essoar.org/doi/10.1002/essoar.10511482.3">Jourdain et al. (GRL, 2022)</a></p> <p>The output files consist of monthly climatologies over either 1989-2009 or 2080-2100. The file names have the form:</p> <p><strong>climato_monthly_AMUXL12-GNJ002_&lt;simu&gt;_&lt;group&gt;_1989_2009.nc</strong>, where :</p> <ul> <li>&lt;simu&gt; is either : <ul> <li>&quot;BM02MAR&quot; (ensemble member A, present-day),</li> <li>&quot;BM03MAR&quot; (ensemble member B, present-day),</li> <li>&quot;BM04MAR&quot; (ensemble member C, present-day),</li> <li>&quot;BM02MARrcp85&quot; (ensemble member A, future for both surface and lateral boundaries),</li> <li>&quot;BM03MARrcp85&quot; (ensemble member B, future for&nbsp;surface BUT NOT for&nbsp;lateral boundaries),</li> <li>&quot;BM03MARrcBDY&quot;&nbsp;(ensemble member B, future for both surface and lateral boundaries),</li> <li>&quot;BM04MARrcp85&quot; (ensemble member C, future for both surface and lateral boundaries),</li> </ul> </li> <li>&lt;group&gt; is either : <ul> <li>&quot;SBC&quot; (surface boundary conditions),</li> <li>&quot;icemod&quot; (sea ice variables),</li> <li>&quot;gridT&quot; (temperature, salinity),</li> <li>&quot;gridU&quot; (zonal velocities),</li> <li>&quot;gridV&quot; (meridional velocities).</li> </ul> </li> </ul> <p>Grid information in:</p> <ul> <li>mesh_mask_AMUXL12_BedMachineAntarctica-2019-05-24.nc (ensemble member A),</li> <li>mesh_mask_AMUXL12_BedMachineAntarctica-2020-07-15_v02_ICB380.nc (ensemble members B &amp; C).</li> </ul> <p>where:</p> <ul> <li>glamt : longitude</li> <li>gphit: latitude</li> <li>e1t, e2t, e3t_0 : mesh size (in meters) along x, y, z</li> <li>tmask = 1&nbsp;for ocean mesh, = 0 otherwise (land, continental ice).</li> </ul> <p>&nbsp;</p> <p><strong>Acknowledgments:</strong> This work was granted access to the HPC resources of CINES (occigen) under the allocation A0100106035 attributed by GENCI.</p>

opencc-by-4.0Oct 2022View details →
zenodo48/100

Marine plastics alter the organic matter composition of the air-sea boundary layer, with influences on CO2 exchange: a large-scale analysis method to explore future ocean scenarios

<p>Microplastics are substrates for microbial activity and can influence biomass production. This has potentially important implications in the sea-surface microlayer, the marine boundary layer that controls gas exchange with the atmosphere and where biologically produced organic compounds can accumulate. In the present study, we used six large scale mesocosms to simulate future ocean scenarios of high plastic concentration. Each mesocosm was filled with 3 m3&nbsp;of seawater from the oligotrophic Sea of Crete, in the Eastern Mediterranean Sea. A known amount of standard polystyrene microbeads of 30 &mu;m diameter was added to three replicate mesocosms, while maintaining the remaining three as plastic-free controls. Over the course of a 12-day experiment, we explored microbial organic matter dynamics in the sea-surface microlayer in the presence and absence of microplastic contamination of the underlying water. Our study shows that microplastics increased both biomass production and enrichment of carbohydrate-like and proteinaceous marine gel compounds in the sea-surface microlayer. Importantly, this resulted in a 3 % reduction in the concentration of dissolved CO2&nbsp;in the underlying water. This reduction was associated to both direct and indirect impacts of microplastic pollution on the uptake of CO2&nbsp;within the marine carbon cycle, by modifying the biogenic composition of the sea&#39;s boundary layer with the atmosphere.</p>

opencc-by-4.0Oct 2022View details →
zenodo48/100

Global continental and ocean basin reconstructions since 200 Ma

<div>Description of Resources - Seton et al. (2012)</div> <div>&nbsp;</div> <div>This file provides a detailed description of all of the files that make up the data collection associated with the publication: Seton, M., M&uuml;ller, R. D., Zahirovic, S., Gaina, C., Torsvik, T., Shephard, G., Talsma, A., Gurnis, M., Turner, M., Maus, S., Chandler, M. (2012). Global continental and ocean basin reconstructions since 200 Ma. Earth-Science Reviews, 113(3), 212-270. doi:<a href="https://doi.org/10.1016/j.earscirev.2012.03.002" target="_blank" rel="noopener">10.1016/j.earscirev.2012.03.002</a></div> <div>&nbsp;</div> <div>Note: For information on file formats and what programs to use to interact with various file formats, see "File Formats and Recommended Programs&rdquo;.</div> <div>&nbsp;</div> <div>&nbsp;</div> <div>The files associated with this data collection allow for the visualisation and/or manipulation of the global plate motion model presented by Seton et al. (2012), they include:</div> <div>&bull; <strong>Rotations </strong>- Global rotation model that contains the reconstruction poles that describe the motions of the continents and oceans.</div> <div>* Seton_etal_ESR2012_2012.1.rot (410 KB)</div> <div>&nbsp;</div> <div>&bull; <strong>Plate IDs </strong>- A list of all the plate IDs used in the rotation and geometry files and their corresponding plate names.</div> <div>* Seton_etal_ESR2012_PlateIDs.pdf (102 KB)&nbsp;</div> <div>&nbsp;</div> <div>&bull; <strong>Coastlines </strong>- Geometries of the present-day coastlines.</div> <div>* Seton_etal_ESR2012_Coastline_2012.1.gpml (17.5 MB)</div> <div>* Seton_etal_ESR2012_Coastline_2012.1_polyline.shp (3.3 MB inc. auxiliary files, datum-WGS 1984)</div> <div>* Seton_etal_ESR2012_Coastline_2012.1_polyline.txt (2.7 MB)</div> <div>* Seton_etal_ESR2012_Coastline_2012.1_polyline.kml (4.4 MB)</div> <div>&nbsp;</div> <div>&bull; <strong>Continent-ocean boundaries </strong>(COBs) - Locations of the boundaries between oceanic and continental crust for plates involved in this study.</div> <div>* Seton_etal_ESR2012_COB_2012.1.gpml (410 KB)</div> <div>* Seton_etal_ESR2012_COB_2012.1.shp (152 KB inc. auxiliary files, datum-WGS 1984)</div> <div>* Seton_etal_ESR2012_COB_2012.1.txt (86 KB)</div> <div>* Seton_etal_ESR2012_COB_2012.1.kml (176 KB)</div> <div>&nbsp;</div> <div>&bull; <strong>Plate polygons and boundary geometries</strong> - Topologically closed plate polygons are constructed from the intersection of ridges, transforms, subduction zones and other plate boundary geometries. These 'resolved topologies' are valid at 1 Myr intervals (0-200 Ma). The plate boundary geometries and plate polygons have been assigned plate reconstruction IDs to allow them to be reconstructed using the supplied rotation file.&nbsp;</div> <div>* Seton_etal_ESR2012_PP_2012.1.gpml (29.5 MB)</div> <div>&nbsp;</div> <div>Note:</div> <div>Paleo age grids used by Seton et al. (2012) are released in M&uuml;ller et al. (2013) [M&uuml;ller, R. D., Dutkiewicz, A., Seton, M., &amp; Gaina, C. (2013). Seawater chemistry driven by supercontinent assembly, breakup, and dispersal. Geology, 41(8), 907-910. doi: <a href="https://doi.org/10.1130/G34405.1" target="_blank" rel="noopener">10.1130/g34405.1</a>]</div> <div>&nbsp;</div> <div>The paleo age grids associated with this model can be accessed at: <a href="https://repo.gplates.org/webdav/PlateModel_Age_SR_Grids/Seton_etal_2012_ESR/" target="_blank" rel="noopener">https://repo.gplates.org/webdav/PlateModel_Age_SR_Grids/Seton_etal_2012_ESR/</a></div>

opencc-by-4.0Mar 2012View details →
zenodo48/100

Ocean Basin Evolution and Global-Scale Plate Reorganization Events Since Pangea Breakup

<p><strong>Abstract&nbsp;</strong></p> <p>We present a revised global plate motion model with continuously closing plate boundaries ranging from the Triassic at 230 Ma to the present day, assess differences between alternative absolute plate motion models, and review global tectonic events. Relatively high mean absolute plate motion rates around 9&ndash;10 cm yr-1 between 140 and 120 Ma may be related to transient plate motion accelerations driven by the successive emplacement of a sequence of large igneous provinces during that time.&nbsp;A ~100 Ma event is most clearly expressed in the Indian Ocean and may reflect the initiation of Andean-style subduction along southern continental Eurasia, while an ~80 Ma acceleration of mean rates from 6 to 8 cm yr-1 reflects the initial northward acceleration of India and simultaneous speedups of plates in the Pacific. An event at ~50 Ma expressed in relative, and some absolute plate motion changes around the globe and in a reduction of global mean velocities from about 6 to 4&ndash;5 cm yr-1, indicates that an increase in collisional forces (such as the India-Eurasia collision) and ridge subduction events in the Pacific (such as the Izanagi-Pacific Ridge) play a significant role in modulating plate velocities.</p> <p><strong>Muller et al. (2016) AREPS model file versions</strong></p> <p>This model has been maintained for some time after initial publication. There are six versions of the model that we provide, including:</p> <ul> <li>v1.10 &ndash; Some minor fixes were made to plate topologies, and so conforms to the originally-published model.</li> <li>v1.11 &ndash; A back-arc basin north of Arabia was introduced in the Cretaceous (see note below), and hence slightly diverges from the original model in plate topologies, velocities, and seafloor age-grids for this region.</li> <li>v1.14 &ndash; The latest version of the model that has duplicated topology segments cleaned from the evolving polygons, which helps with quantifying plate boundary lengths in the resolved topology output.</li> <li>v1.15 &ndash; The correction to the pre-83 Ma Pacific rotations according to Torsvik et al. (2019) has been applied.</li> <li>v1.16 &ndash; Some fixes to topologies</li> <li>v1.17 &ndash; Major update to the seafloor age-grids and topologies. Age-grids are consistent with v1.15 and 1.16 as well. We strongly recommend you use this version of the model.</li> </ul> <p>Note about the evolution of the western Tethys in this model: The Western Tethys, north of Arabia, is punctuated by ophiolite formation and obduction in Cretaceous times. The first end-member involves applying the central and eastern Tethys analogues of back-arc opening and closure following ophiolite obduction, much like is usually implied in the Kohistan-Ladakh and Greater India collision zone. This scenario makes the Western Tethys north of Arabia consistent with the model of the eastern Tethys. However, a second end-member interpretation for the formation of many of the ophiolites in the region is that they develop when a mid-oceanic ridge inverts to become a subduction zone. Both options are plausible, but we implemented a change in this plate model after it was published to reflect the first end-member scenario in order to link the region to the eastern Tethys in a plausible way. This scenario is based on back-arc opening from ~125 Ma (Jolivet et al., 2016), with subduction of back-arc initiating in Albian times from ~110 Ma (Ghazi et at., 2003; Aygul et al., 2015). Obduction and Arabia collision with an arc occurs at 85 Ma (Jolivet et al., 2016; Jagoutz et al., 2016). The scenario is also consistent with the recent work of Morris et al. (2016) on the Oman Ophiolite.</p> <p>&nbsp;</p> <p>The agegrids associated with this model can be accessed at: <a href="https://repo.gplates.org/webdav/PlateModel_Age_SR_Grids/Muller_etal_2016_AREPS/" target="_blank" rel="noopener">https://repo.gplates.org/webdav/PlateModel_Age_SR_Grids/Muller_etal_2016_AREPS/</a></p>

opencc-by-4.0Apr 2016View details →
zenodo48/100

The 2001 Hawaiian Ocean Mixing Experiment (HOME): Internal-tide Mode-1 Amplitude Data from the Southern Tomographic Array

<p>Ocean acoustic tomography was used to measure tides in the farfield of the Hawaiian Ridge in 2001 during the Hawaiian Ocean Mixing Experiment (HOME). &nbsp;&nbsp;The measurements were components of a suite of large- and small-scale measurements obtained during HOME with the aim of illuminating the pathways of tidal energy that may be driving deep-ocean mixing. &nbsp;Using reciprocal transmissions, the tomographic arrays were designed to measure the radiation of mode-1 internal tides from the Ridge, together with barotropic tidal currents. This publication makes available the tomographic estimates for mode-1 internal-waves derived<br>from the six paths of the southern HOME tomography array.</p>

opencc-by-4.0Jun 2024View details →
zenodo48/100

The 2001 Hawaiian Ocean Mixing Experiment (HOME): Internal-tide Mode-1 Amplitude Data from the Northern Tomographic Array

<p>Ocean acoustic tomography was used to measure tides in the farfield of the Hawaiian Ridge in 2001 during the Hawaiian Ocean Mixing Experiment (HOME). &nbsp; The measurements were components of a suite of large- and small-scale measurements obtained during HOME with the aim of illuminating the pathways of tidal energy that may be driving deep-ocean mixing. &nbsp;Using reciprocal transmissions, the tomographic arrays were designed to measure the radiation of mode-1 internal tides from the Ridge, together with barotropic tidal currents. This publication makes available the tomographic estimates for mode-1 internal-waves derived<br>from the six paths of the northern HOME tomography array.</p>

opencc-by-4.0Jun 2024View details →
zenodo48/100

The 2001 Hawaiian Ocean Mixing Experiment (HOME): High-frequency (>1cpd) Barotropic Current Data from the Northern Tomographic Array

<p>Ocean acoustic tomography was used to measure tides in the farfield of the Hawaiian Ridge in 2001 during the Hawaiian Ocean Mixing Experiment (HOME). &nbsp; The measurements were components of a suite of large- and small-scale measurements obtained during HOME with the aim of illuminating the pathways of tidal energy that may be driving deep-ocean mixing. &nbsp;Using reciprocal transmissions, the tomographic arrays were designed to measure the radiation of mode-1 internal tides from the Ridge, together with barotropic tidal currents. &nbsp;This publication makes available the tomographic estimates for barotropic currents derived from<br>three of the six paths of the northern HOME tomography array.</p>

opencc-by-4.0Jun 2024View details →
zenodo48/100

The 2001 Hawaiian Ocean Mixing Experiment (HOME): High-frequency (>1cpd) Barotropic Current Data from the Southern Tomographic Array

<p>Ocean acoustic tomography was used to measure tides in the farfield of the Hawaiian Ridge in 2001 during the Hawaiian Ocean Mixing Experiment (HOME). &nbsp;&nbsp;The measurements were components of a suite of large- and small-scale measurements obtained during HOME with the aim of illuminating the pathways of tidal energy that may be driving deep-ocean mixing. &nbsp;Using reciprocal transmissions, the tomographic arrays were designed to measure the radiation of mode-1 internal tides from the Ridge, together with barotropic tidal currents.&nbsp; This publication makes available the tomographic estimates for barotropic currents derived from<br>the six paths of the southern HOME tomography array.</p>

opencc-by-4.0Jun 2024View details →
zenodo48/100

Shelf–to–basin shuttle of highly fractionated chromium isotopes in the Arctic Ocean

<p>This dataset contains total dissolved chromium concentration and isotopic ratios in seawater associated with our paper "Shelf&ndash;to&ndash;basin shuttle of highly fractionated chromium isotopes in the Arctic Ocean" (submitted and accepted in Geochimica Cosmochimica Acta).</p> <p>The seawater samples were collected during the 2015 ArcticNet/Geotraces cruise aboard the CCGS Amundsen along the sections GN02 and GN03.&nbsp;</p> <p>All processing and measurements were done at the Saskatchewan Isotope Laboratory at the University of Saskatchewan (Canada).</p> <p>This data will also be available in the next GEOTRACES Intermediate Data Product (November 2025).</p> <p><span><strong>&gt;</strong> Cr_53_52_D_DELTA_BOTTLE_METADATA-2015CanadianArcticGEOTRACEScruise_OVERVIEW.csv : details the context of the expedition and the sampling/processing methods;</span></p> <p><span><strong>&gt;</strong> Cr_53_52_D_DELTA_BOTTLE_METADATA-2015CanadianArcticGEOTRACEScruise_DATA.csv : gives details on the data (<em>e.g.</em> units), as well as technical information associated with the measurements;</span></p> <p><span><strong>&gt;</strong> Cr_53_52_D_DELTA_BOTTLE_DATA-2015CanadianArcticGEOTRACEScruise.csv : chromium data associated with the paper.</span></p>

opencc-by-4.0Jul 2024View details →
zenodo48/100

A high-resolution, multi-decadal, free-running, hydrodynamic simulation of the East Australia Current System using the Regional Ocean Modeling System (Version 3.0, 1994-2019)

<p>The data is from a Regional Ocean Modelling System free-running, hydrodynamic simulation of the East Australian Current System. The model has a horizontal resolution of 2.5-6 km in the cross-shore direction and 5 km in the alongshore direction, and 30 vertical s-levels. The model domain covers the southeastern Australia oceanic region from 25.1-41.5&deg;S and 147.1-162.2&deg;E, and the grid is orientated 20 degrees clockwise to be predominantly orientated alongshore. The time period covered is 02 Jan 1994 to 28 Feb 2019. The model outputs provided are daily averages of the following variables: Two-dimensional variables: Sea surface height (zeta), barotropic cross-grid velocity (u) and barotropic along-grid velocity (v). Three-dimensional variables: Temperature (temp), salinity (salt), density (rho), cross-grid velocity (u), along-grid velocity (v) and vertical velocity (w), temperature time rate of change (temp_rate), temperature horizontal advection term (temp_hadv), temperature vertical advection term (temp_vadv), temperature horizontal diffusion term (temp_hdiff), temperature vertical diffusion term (temp_vdiff). In this version, the heat budget terms (temp_rate, temp_hadv, temp_vadv, temp_hdiff and temp_vdiff) are set to be zeros on the land.</p> <p>&nbsp;</p> <p>This model is part of the <a href="../records/8294716"><strong>South East Australian Coastal Ocean Forecast System (SEA-COFS)</strong></a> suite of models.</p>

opencc-by-4.0Jul 2024View details →
zenodo48/100

The FORCIS database: A global census of planktonic Foraminifera from ocean waters

<p>The FORCIS (Foraminifera Response to Climatic Stress) database&nbsp;is a synthesis grouping datasets on living planktonic foraminifera. We assembled foraminiferal diversity and distribution data in the global oceans from 1910 until 2018, curating published and unpublished datasets. This database includes data collected using plankton tows, continuous plankton recorder, sediment traps and plankton pump from the global ocean.</p> <p>The FORCIS database version 01&nbsp;is composed of 5 files (&ldquo;.csv&rdquo; format). All data coming from different sampling devices were put into separate &ldquo;.csv&rdquo; files. Only the data of the CPR from the Southern Hemisphere have been separated from the Northern Hemisphere CPR data as the data structure is not the same (species counts resolved vs. binned total counts, respectively).&nbsp;&nbsp;</p> <p>Apart from the file of&nbsp; CPR data from the Northern Hemisphere that contains only metadata and binned total counts, all the remaining four files contain 4 blocks:</p> <ul> <li> <p>Block 1: metadata (from column 1 to 71)</p> </li> <li> <p>Block 2: original counts (from column 72 to 274)</p> </li> <li> <p>Block 3: generated counts based on the validated taxonomy (from column 275 to 331). We added &ldquo;_VT&rdquo; to each species name to distinguish it from other taxonomy levels. E.g. &ldquo;g_bulloides&rdquo; became &ldquo;g_bulloides_VT&rdquo;. The number of species counted per subsample is also reported in the column &ldquo;number_of_species_counted_VT&rdquo;</p> </li> <li> <p>Block 4: generated counts based on the lumped taxonomy (from column 332 to 379). In this case, we added &ldquo;_LT&rdquo; to each species name. E.g. &ldquo;n_dutertrei&rdquo; became &ldquo;n_dutertrei_VT&rdquo;. We also calculated the number of species counted per subsample and reported it in the column &ldquo;number_of_species_counted_LT&rdquo;</p> </li> </ul> <p>Foraminifera abundance data counts are reported in different categories in the blocks 1,2 and 3 and described in the table below:</p> <table> <tbody> <tr> <td> <p><strong>count_type</strong></p> </td> <td> <p><strong>unit</strong></p> </td> </tr> <tr> <td> <p>Absolute</p> </td> <td> <p>ind/m3</p> </td> </tr> <tr> <td> <p>Relative</p> </td> <td> <p>%</p> </td> </tr> <tr> <td> <p>Raw</p> </td> <td> <p>number of individuals</p> </td> </tr> <tr> <td> <p>Fluxes</p> </td> <td> <p>ind/m2/day</p> </td> </tr> <tr> <td> <p>Bin_Absolute</p> </td> <td> <p>ind/m3</p> </td> </tr> <tr> <td> <p>Bin_Relative</p> </td> <td> <p>%</p> </td> </tr> <tr> <td> <p>Bin_Raw</p> </td> <td> <p>number of individuals</p> </td> </tr> <tr> <td> <p>Bin_Fluxes</p> </td> <td> <p>ind/m2/day</p> </td> </tr> </tbody> </table> <p>&nbsp;</p> <p>For more details about the FORCIS database column description, please check the data descriptor paper <strong>Chaabane et al. (2023) (https://doi.org/10.1038/s41597-023-02264-2).</strong></p> <p>The database is kept open for any new entries and the updated version will be released in csv format. The labels of updated versions of the released &ldquo;.csv&rdquo; files will contain the date of their publication and versioning number.</p>

opencc-by-4.0Dec 2022View details →
zenodo48/100

A tectonic model reconciling evidence for the collisions between India, Eurasia and intra-oceanic arcs of the central-eastern Tethys

<p>2 February 2014<br>Version 1.2</p> <p>Supplement and plate model accompanying:&nbsp;<br>Gibbons, A., Zahirovic, S., M&uuml;ller, R., Whittaker, J., and Yatheesh, V., 2015, A tectonic model reconciling evidence for the collisions between India, Eurasia and intra-oceanic arcs of the central-eastern Tethys: Gondwana Research FOCUS.</p> <p><strong>Gibbons_etal_2015_GR_PlateModel.zip</strong></p> <p>This directory contains four files:</p> <p>TPW_CK95G94_Rigid_Gibbons.rot - the Gibbons et al. global rotation model TPW_CK95G94_PP_Rigid_Gibbons.gpml &nbsp;- the Gibbons et al. global evolving topologies&nbsp;<br>CK95G94_Coastlines.gpmlz - Present-day coastlines with Plate ID assignments<br>CK95G94_StaticPolygons_Gibbons.gpmlz - Present-day block outlines&nbsp;</p> <p>To load these datasets in GPlates do the following:</p> <p>1. &nbsp;Open GPlates<br>2. &nbsp;Pull down the GPlates File menu and select the operation Open Feature Collection<br>3. &nbsp;Click all the files while holding down the shift key to select all files. &nbsp;All the files should be highlighted.<br>4. &nbsp;Click Open&nbsp;</p> <p>Alternatively, drag and drop the files onto the globe.<br>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;<br>Play around with the GPlates buttons to make an animation, select features, draw features, etc. &nbsp;For more information, read the GPlates manual which can be downloaded from <a href="https://www.gplates.org">www.gplates.org</a></p> <p><strong>Zahirovic_etal_2014_SE</strong></p> <p>This file provides a detailed description of all of the files that make up the data collection associated with the publication: Zahirovic, S., Seton, M., &amp; M&uuml;ller, R. D. (2014). The Cretaceous and Cenozoic tectonic evolution of Southeast Asia. Solid Earth, 5(1), 227-273. doi:<a href="https://doi.org/10.5194/se-5-227-2014" target="_blank" rel="noopener">10.5194/se-5-227-2014</a></p> <p>Any questions, please email: &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;<br>Ana Gibbons &lt;angi@statoil.com&gt;<br>Sabin Zahirovic &lt;sabin.zahirovic@sydney.edu.au&gt;</p>

opencc-by-4.0Apr 2014View details →
zenodo48/100

Biogenic silicate concentration in sea water samples, collected from the CTD in the Southern Ocean during the austral summer of 2016/2017, on board the Antarctic Circumnavigation Expedition.

<p><strong>Dataset abstract</strong></p> <p>Biogenic Silicate (Bsi) concentration (&micro;mol/L) in seawater data. Water samples were collected from CTD rosette deployments, filtered on board and then analysed by flow injection following appropriate digestion.</p> <p>This data supports chemical and biological oceanography studies conducted during the Antarctic Circumnavigation Expedition.</p> <p><strong>Dataset contents</strong></p> <ul> <li>ace_biogenic_silicate_concentration_in_seawater_ctd.csv, data file, comma-separated values</li> <li>ace_biogenic_silicate_concentration_in_seawater_ctd_visual_summary.png, metadata, portable network graphics</li> <li>data_file_header.txt, metadata, text format</li> <li>README.md, metadata, text format</li> </ul> <p>All missing values where no data point exists from lack of sample, have been set to NaN.</p> <p><strong>Dataset license</strong></p> <p>This biogenic silica concentration dataset is made available under the Creative Commons Attribution 4.0 International License (CC BY 4.0) whose full text can be found at https://creativecommons.org/licenses/by/4.0/</p>

opencc-by-4.0Jun 2019View details →
zenodo48/100

Voltage and current data for IEC 62600-30 power quality monitoring from the Mutriku Wave Power Plant and Lir National Ocean Test Facility electrical laboratory

<p>This Technical Note describes the electrical data collected from the Mutriku Wave Power Plant (MWPP) and the Lir National Ocean Test Facility (NOTF) electrical laboratory at the MaREI Centre in the Environmental Research Institute, at University College Cork.</p> <p>In summary, the electrical data collect is for the purpose of analysing the power quality output of a Wave Energy Converter (WEC). The data includes voltage and current signals from the output of a WEC sampled at 15 kHz from the MWPP and a WEC emulator sampled at 20 kHz from the Lir NOTF electrical laboratory. There are 24 datasets from the MWPP taken at various sea state conditions, and there are 56 datasets from the Lir NOTF which are taken with at various sea state conditions, with different control laws, and grid connections.</p> <p>This data is published for purpose of power quality analysis and comparison for future tests. For OPERA, power quality analysis was performed as part of WP5 T5.2 and T5.5, and presented in depth in Deliverables D5.2 and D5.4.</p> <p>See accompanying technical note for more Information.</p>

opencc-by-4.0Jul 2019View details →
zenodo48/100

Quality-checked meteorological data from the Southern Ocean collected during the Antarctic Circumnavigation Expedition from December 2016 to April 2017.

<p><strong>Dataset abstract</strong></p> <p>This dataset contains quality-checked meteorological observations of air temperature, relative humidity, dew point, barometric pressure and observations of downwelling solar radiation and ultraviolet radiation. Further it contains the wind speed and direction relative to the ship but not corrected for air-flow distortion, and translated into the earth reference frame. For each of these variables observations are available from a portside and starboard side sensor. The dataset also contains, cloud base height and sky cover at three levels measured with a Ceilometer.</p> <p>As additional information the solar azimuth and altitude angle have been calculated for the ship&rsquo;s position every five minutes and have been added as a one-minute time series using the nearest value. The ship&rsquo;s position, heading, course and speed over ground are also provided.</p> <p>The wind speed measurements were made at a height of approximately 30.5 meters above sea level. The measurement height of the temperature and humidity probes is 23.7 meters above sea level. The barometric pressure was measured at 20 meters above sea level.</p> <p>The observations have been screened for implausible values and on some occasions despiking based on visual inspection and a rolling interquartile range filter have been applied. Solar radiation measurements are affected by shadowing of the ship, and the air temperature and humidity by the heating of air that passes over the ship. Masks are provided to flag affected observations. The wind speed readings are affected by airflow distortion and should be used with consideration until a dataset of corrected wind speeds is published. More details on airflow distortion can be requested from the contact person.</p> <p><strong>Dataset contents</strong></p> <ul> <li>ACE_filtered_meteorological_data_1min.csv, data file, comma-separated values</li> <li>diff_TA1_TA3_WDR2_5min_1.png, metadata, portable network graphics</li> <li>ratio_SR1_SR3_solangle_5min_1.png, metadata, portable network graphics</li> <li>data_file_header.txt, metadata, text</li> <li>README.txt, metadata, text</li> <li>ace_filtered_meteorological_data_change_log.txt, metadata, text</li> </ul> <p><strong>Change log</strong></p> <p><strong>v1.1</strong> - The range check for skycover (SC) and cloudlevel (CL) was added to the quality-checking routines. 53 data points violated the range check for these variables: these have now been marked as NaN.</p> <p><strong>v1.0</strong> - Initial release of verified meteorological data.</p> <p><strong>Dataset license</strong></p> <p>This meteorological dataset is made available under the Creative Commons Attribution 4.0 International License (CC BY 4.0) whose full description can be found at https://creativecommons.org/licenses/by/4.0/</p>

opencc-by-4.0Aug 2019View details →
zenodo48/100

Raw multibeam bathymetry data collected around the Candlemas Islands, part of the South Sandwich Islands chain in the Southern Ocean on board the R/V Akademik Tryoshnikov during the austral summer of 2016/2017 as part of the Antarctic Circumnavigation Expedition (ACE).

<p><strong>Dataset abstract</strong></p> <p>An ELAC Nautik 3020 multibeam echo sounder with a 20 kHz transducer mounted on the hull of the R/V Akademik Tryoshnikov, was used to collect multibeam bathymetry data during the Antarctic Circumnavigation Expedition (ACE). This particular dataset was collected around the Candlemas Islands, part of the South Sandwich Islands chain in the Southern Ocean in the austral summer of 2016/2017.</p> <p>Bathymetry data were used live during the cruise to look for suitable locations where benthic trawling and remotely-operated vehicle deployments could take place, rather than to undertake specific bathymetric surveys.</p> <p>This raw dataset is provided without calibration information for the surface sound velocity or instrumentation itself and should be used with due caution.</p> <p><strong>Dataset contents</strong></p> <ul> <li>lineYYYYDDmonHHMMSS.xse, data file, proprietary format</li> <li>lineYYYYDDmonHHMMSS.ssv, data file, ASCII</li> <li>location.hydrostar, ancillary file, ASCII</li> <li>data_file_header.txt, metadata, text</li> <li>README.txt, metadata, text</li> </ul> <p><strong>Dataset license</strong></p> <p>This raw multibeam bathymetry dataset is made available under the Creative Commons Attribution 4.0 International License (CC BY 4.0) whose full text can be found at https://creativecommons.org/licenses/by/4.0/</p>

opencc-by-4.0Oct 2019View details →
zenodo48/100

Raw multibeam bathymetry data collected around Scott Island in the Southern Ocean on board the R/V Akademik Tryoshnikov during the austral summer of 2016/2017 as part of the Antarctic Circumnavigation Expedition (ACE).

<p><strong>Dataset abstract</strong></p> <p>An ELAC Nautik 3020 multibeam echo sounder with a 20 kHz transducer mounted on the hull of the R/V Akademik Tryoshnikov, was used to collect multibeam bathymetry data during the Antarctic Circumnavigation Expedition (ACE). This particular dataset was collected around Scott Island in the Southern Ocean in the austral summer of 2016/2017.</p> <p>Bathymetry data were used live during the cruise to look for suitable locations where benthic trawling and remotely-operated vehicle deployments could take place, rather than to undertake specific bathymetric surveys.</p> <p>This raw dataset is provided without calibration information for the surface sound velocity or instrumentation itself and should be used with due caution.</p> <p><strong>Dataset contents</strong></p> <ul> <li>lineYYYYDDmonHHMMSS.xse, data file, proprietary format</li> <li>location.hydrostar, ancillary file, ASCII</li> <li>data_file_header.txt, metadata, text</li> <li>README.txt, metadata, text</li> </ul> <p><strong>Dataset license</strong></p> <p>This raw multibeam bathymetry dataset is made available under the Creative Commons Attribution 4.0 International License (CC BY 4.0) whose full text can be found at https://creativecommons.org/licenses/by/4.0/</p> <p>&nbsp;</p>

opencc-by-4.0Oct 2019View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record